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Full-text search result: 128 genes by "Homolog" TXT SET

Synechococcus sp. WH 7803 (128 genes ) TXT SET

SynWH7803_0428 InterPro IPR004044 K Homology, type 2; HMMPfam:PF07650 KH_2
InterPro IPR004044 K Homology, type 2; ProfileScan:PS50823 KH_TYPE_2
InterPro IPR004087 K Homology; HMMSmart:SM00322 KH
InterPro IPR009019 K Homology, prokaryotic type; superfamily:SSF54814 KH_prok
InterPro IPR015946 K homology-like, alpha/beta; Gene3D:G3DSA:3.30.300.20 KH_prok
SynWH7803_0993 Gene product Porin homolog
InterPro IPR001119 S-layer homology domain; HMMPfam:PF00395 SLH
InterPro IPR001119 S-layer homology domain; ProfileScan:PS51272 SLH
SynWH7803_1726 InterPro IPR004044 K Homology, type 2; HMMPfam:PF07650 KH_2
InterPro IPR004044 K Homology, type 2; ProfileScan:PS50823 KH_TYPE_2
InterPro IPR009019 K Homology, prokaryotic type; superfamily:SSF54814 KH_prok
Blast Hits [sprot] ERA_SYNY3 (sp|Q55526) GTP-binding protein era homolog OS=Synechocystis sp. (strain PCC 6803) GN=era PE=3 SV=1
SynWH7803_1729 InterPro IPR004087 K Homology; HMMSmart:SM00322 KH
SynWH7803_1779 Gene product Porin homolog
InterPro IPR001119 S-layer homology domain; HMMPfam:PF00395 SLH
InterPro IPR001119 S-layer homology domain; ProfileScan:PS51272 SLH
SynWH7803_1908 InterPro IPR004087 K Homology; HMMSmart:SM00322 KH
InterPro IPR004088 K Homology, type 1; ProfileScan:PS50084 KH_TYPE_1
InterPro IPR018111 K Homology, type 1, subgroup; HMMPfam:PF00013 KH_1
SynWH7803_2077 InterPro IPR004087 K Homology; HMMSmart:SM00322 KH
InterPro IPR004088 K Homology, type 1; ProfileScan:PS50084 KH_TYPE_1
InterPro IPR009019 K Homology, prokaryotic type; superfamily:SSF54814 KH_prok
InterPro IPR015946 K homology-like, alpha/beta; Gene3D:G3DSA:3.30.300.20 KH_prok
SynWH7803_2235 InterPro IPR001119 S-layer homology domain; HMMPfam:PF00395 SLH
InterPro IPR001119 S-layer homology domain; ProfileScan:PS51272 SLH
SynWH7803_2236 InterPro IPR001119 S-layer homology domain; HMMPfam:PF00395 SLH
InterPro IPR001119 S-layer homology domain; ProfileScan:PS51272 SLH
SynWH7803_0060 Gene product SpoIID sporulation protein homolog
SynWH7803_0298 Gene product DNA-binding protein, sugar fermentation stimulation protein homolog
Blast Hits [sprot] SFSA_SYNSC (sp|Q3AN08) Sugar fermentation stimulation protein homolog OS=Synechococcus sp. (strain CC9605) GN=sfsA PE=3 SV=1
SynWH7803_0489 Gene product Putative bilin biosynthesis protein, MpeV homolog
SynWH7803_0498 Gene product Conserved hypothetical protein, CpeT homolog, phycoerythrin linker gene region
SynWH7803_0499 Gene product Conserved hypothetical protein, CpeS homolog, phycoerythrin linker gene region
SynWH7803_0578 Gene product Light repressed protein A homolog
Blast Hits [sprot] LRTA_SYNY3 (sp|P74518) Light repressed protein A homolog OS=Synechocystis sp. (strain PCC 6803) GN=lrtA PE=3 SV=1
SynWH7803_0646 Gene product Possible staphylococcus nuclease homologue (SNase-like)
SynWH7803_0689 Gene product CbbX protein homolog
Blast Hits [sprot] CFXQ_PORPU (sp|P51228) Protein cfxQ homolog OS=Porphyra purpurea GN=cfxQ PE=3 SV=1
SynWH7803_0854 Gene product Predicted epimerase, PhzC/PhzF homolog
SynWH7803_0901 Gene product Staphylococcal nuclease homolog
Blast Hits [nr] ref|YP_001225837.1| nuclease-like protein [Synechococcus sp. WH 7803] gi|147848989|emb|CAK24540.1| Staphylococcal nuclease homologue [Synechococcus sp. WH 7803]
SynWH7803_1080 Gene product Bacterial UmuC protein homolog (SOS-regulated protein)
SynWH7803_1081 Gene product Bacterial UmuD protein homolog (SOS-regulated protein)
SynWH7803_1112 Gene product Putative CbbY homolog (potential phosphonatase)
SynWH7803_1178 Gene product Porin homolog
SynWH7803_1314 Gene product GTP-binding protein TypA/BipA homolog
Blast Hits [sprot] TYPA_SYNY3 (sp|P72749) GTP-binding protein TypA/BipA homolog OS=Synechocystis sp. (strain PCC 6803) GN=typA PE=3 SV=1
SynWH7803_1456 Gene product Staphylococcal nuclease homologue
SynWH7803_1535 Gene product ATP-dependent Clp protease ATP-binding subunit clpA homolog
Blast Hits [sprot] CLPC_GUITH (sp|O78410) ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Guillardia theta GN=clpC PE=3 SV=1
SynWH7803_1721 Gene product Circadian phase modifier CpmA homolog
SynWH7803_2114 Gene product Staphylococcal nuclease homologue
Blast Hits [nr] ref|YP_001224624.1| nuclease-like protein [Synechococcus sp. WH 7803] gi|147847776|emb|CAK23327.1| Staphylococcal nuclease homolog [Synechococcus sp. WH 7803]
SynWH7803_2155 Gene product Putative phycoerythrin linker protein CpeS homolog
SynWH7803_2254 Gene product Inactive homolog of metal-dependent protease, putative molecular chaperone
SynWH7803_0010 Blast Hits [sprot] NUSB_CYAP4 (sp|B8HYJ8) N utilization substance protein B homolog OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=nusB PE=3 SV=1
SynWH7803_0011 Blast Hits [sprot] FTSY_SYNY3 (sp|P73930) Cell division protein ftsY homolog OS=Synechocystis sp. (strain PCC 6803) GN=ftsY PE=3 SV=1
SynWH7803_0094 Blast Hits [sprot] PXDN_MOUSE (sp|Q3UQ28) Peroxidasin homolog OS=Mus musculus GN=Pxdn PE=2 SV=1
SynWH7803_0149 Blast Hits [sprot] CRCB1_PROMM (sp|Q7V938) Protein crcB homolog 1 OS=Prochlorococcus marinus (strain MIT 9313) GN=crcB1 PE=3 SV=1
SynWH7803_0150 Blast Hits [sprot] CRCB2_PROMM (sp|Q7V937) Protein crcB homolog 2 OS=Prochlorococcus marinus (strain MIT 9313) GN=crcB2 PE=3 SV=1
SynWH7803_0154 Blast Hits [sprot] IGAA_YERPE (sp|P58722) Putative membrane protein igaA homolog OS=Yersinia pestis GN=YPO0142 PE=3 SV=1
SynWH7803_0219 Blast Hits [sprot] YDJC_DANRE (sp|A2BIR6) UPF0249 protein ydjC homolog OS=Danio rerio GN=ydjc PE=3 SV=1
SynWH7803_0280 Blast Hits [sprot] CA069_DANRE (sp|B8JMH0) Putative transferase C1orf69 homolog, mitochondrial OS=Danio rerio GN=ch1073-162b20.1 PE=3 SV=1
SynWH7803_0299 Blast Hits [sprot] MVIN_SYNY3 (sp|Q55179) Virulence factor mviN homolog OS=Synechocystis sp. (strain PCC 6803) GN=mviN PE=3 SV=1
SynWH7803_0314 Blast Hits [sprot] TATA_PROM2 (sp|A8G311) Sec-independent protein translocase protein tatA/E homolog OS=Prochlorococcus marinus (strain MIT 9215) GN=tatA PE=3 SV=1
SynWH7803_0355 Blast Hits [sprot] FTSH4_SYNY3 (sp|P72991) Cell division protease ftsH homolog 4 OS=Synechocystis sp. (strain PCC 6803) GN=slr1604 PE=3 SV=1
SynWH7803_0372 Blast Hits [sprot] RNE_SYNY3 (sp|P72656) Ribonuclease E homolog OS=Synechocystis sp. (strain PCC 6803) GN=rne PE=3 SV=1
SynWH7803_0460 Blast Hits [sprot] MRP_SYNY3 (sp|P53383) Protein mrp homolog OS=Synechocystis sp. (strain PCC 6803) GN=mrp PE=3 SV=1
SynWH7803_0524 Blast Hits [sprot] HEMK_SYNY3 (sp|P74003) Protein methyltransferase hemK homolog OS=Synechocystis sp. (strain PCC 6803) GN=sll1237 PE=3 SV=1
SynWH7803_0553 Blast Hits [sprot] UFL1_ARATH (sp|Q9LX73) E3 UFM1-protein ligase 1 homolog OS=Arabidopsis thaliana GN=At3g46220 PE=3 SV=1
SynWH7803_0593 Blast Hits [sprot] YD286_MOUSE (sp|Q9CWB7) Glutaredoxin-like protein YDR286C homolog OS=Mus musculus PE=1 SV=1
SynWH7803_0632 Blast Hits [sprot] ERA_XANOR (sp|Q5H1R1) GTP-binding protein era homolog OS=Xanthomonas oryzae pv. oryzae GN=era PE=3 SV=1
SynWH7803_0633 Blast Hits [sprot] FTSI_MESVI (sp|Q9MUV9) Peptidoglycan synthase ftsI homolog OS=Mesostigma viride GN=ftsI PE=3 SV=1
SynWH7803_0681 Blast Hits [TAIR_pep] AT4G21560.3 | Symbols: VPS28-1 | VPS28-1 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 28 HOMOLOG 1); transporter | chr4:11469037-11469666 REVERSE
Blast Hits [sprot] VP281_ARATH (sp|O65421) Vacuolar protein sorting-associated protein 28 homolog 1 OS=Arabidopsis thaliana GN=VPS28-1 PE=1 SV=1
SynWH7803_0707 Blast Hits [sprot] Y1022_METTH (sp|O27101) Putative biopolymer transport protein exbB homolog OS=Methanobacterium thermoautotrophicum GN=MTH_1022 PE=3 SV=1
SynWH7803_0738 Blast Hits [sprot] CE022_MOUSE (sp|Q8BGC1) UPF0489 protein C5orf22 homolog OS=Mus musculus PE=2 SV=1
SynWH7803_0770 Blast Hits [sprot] PTC1_HUMAN (sp|Q13635) Protein patched homolog 1 OS=Homo sapiens GN=PTCH1 PE=1 SV=2
SynWH7803_0785 Blast Hits [sprot] COQ4_TRYBB (sp|Q382H9) Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Trypanosoma brucei brucei GN=Tb11.01.5180 PE=3 SV=2
SynWH7803_0807 Blast Hits [sprot] CRCB1_BRUSU (sp|Q8FZV1) Protein crcB homolog 1 OS=Brucella suis GN=crcB1 PE=3 SV=1
SynWH7803_0816 Blast Hits [sprot] CI021_TAKRU (sp|Q8AV19) UPF0308 protein C9orf21 homolog OS=Takifugu rubripes PE=3 SV=1
SynWH7803_0822 Blast Hits [sprot] GLYR1_DROME (sp|Q8T079) Putative oxidoreductase GLYR1 homolog OS=Drosophila melanogaster GN=CG4747 PE=1 SV=1
SynWH7803_0849 Blast Hits [sprot] FRYL_HUMAN (sp|O94915) Protein furry homolog-like OS=Homo sapiens GN=FRYL PE=1 SV=2
SynWH7803_0895 Blast Hits [sprot] DNJ10_CAEEL (sp|Q8TA83) DnaJ homolog dnj-10 OS=Caenorhabditis elegans GN=dnj-10 PE=1 SV=1
SynWH7803_0903 Blast Hits [sprot] STK11_DICDI (sp|Q54WJ0) Serine/threonine-protein kinase 11 homolog OS=Dictyostelium discoideum GN=lkb1 PE=3 SV=1
SynWH7803_0930 Blast Hits [sprot] CM027_BOVIN (sp|Q3ZC52) Uncharacterized protein C13orf27 homolog OS=Bos taurus PE=2 SV=2
SynWH7803_0952 Blast Hits [sprot] LACB2_CAEEL (sp|Q95Q18) Beta-lactamase-like protein 2 homolog OS=Caenorhabditis elegans GN=Y53F4B.39 PE=3 SV=1
SynWH7803_1017 Blast Hits [sprot] PESC_LACBS (sp|B0CQL7) Pescadillo homolog OS=Laccaria bicolor (strain S238N-H82) GN=NOP7 PE=3 SV=1
SynWH7803_1019 Blast Hits [sprot] HOME1_BOVIN (sp|Q2KJ56) Homer protein homolog 1 OS=Bos taurus GN=HOMER1 PE=2 SV=1
SynWH7803_1046 Blast Hits [sprot] CYSR_SYNY3 (sp|Q55854) Regulatory protein cysR homolog OS=Synechocystis sp. (strain PCC 6803) GN=cysR PE=3 SV=1
SynWH7803_1116 Blast Hits [sprot] FTSH1_SYNY3 (sp|Q55700) Cell division protease ftsH homolog 1 OS=Synechocystis sp. (strain PCC 6803) GN=slr0228 PE=3 SV=1
SynWH7803_1144 Blast Hits [sprot] ZER1_DROME (sp|Q9W0E8) Protein zer-1 homolog OS=Drosophila melanogaster GN=CG12084 PE=2 SV=2
SynWH7803_1203 Blast Hits [sprot] MIDA_DROME (sp|Q9VGR2) Protein midA homolog, mitochondrial OS=Drosophila melanogaster GN=CG17726 PE=1 SV=1
SynWH7803_1216 Blast Hits [sprot] FTSH1_SYNY3 (sp|Q55700) Cell division protease ftsH homolog 1 OS=Synechocystis sp. (strain PCC 6803) GN=slr0228 PE=3 SV=1
SynWH7803_1278 Blast Hits [sprot] PER2_SPAJD (sp|Q8K3T2) Period circadian protein homolog 2 OS=Spalax judaei GN=PER2 PE=2 SV=1
SynWH7803_1403 Blast Hits [sprot] PUS7L_HUMAN (sp|Q9H0K6) Pseudouridylate synthase 7 homolog-like protein OS=Homo sapiens GN=PUS7L PE=1 SV=1
SynWH7803_1411 Blast Hits [sprot] ALKB2_BOVIN (sp|Q58DM4) Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2 OS=Bos taurus GN=ALKBH2 PE=2 SV=1
SynWH7803_1462 Blast Hits [sprot] CP13A_DANRE (sp|Q7ZVJ8) UPF0585 protein C16orf13 homolog A OS=Danio rerio GN=zgc:56719 PE=2 SV=3
SynWH7803_1611 Blast Hits [sprot] EMRB_HAEIN (sp|P44927) Multidrug resistance protein B homolog OS=Haemophilus influenzae GN=emrB PE=3 SV=1
SynWH7803_1612 Blast Hits [sprot] COQ4_RAT (sp|Q4FZU1) Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Rattus norvegicus GN=Coq4 PE=2 SV=1
SynWH7803_1668 Blast Hits [sprot] DVR1_STRPU (sp|P48969) Protein DVR-1 homolog OS=Strongylocentrotus purpuratus GN=DVR1 PE=2 SV=1
SynWH7803_1676 Blast Hits [sprot] CF186_XENTR (sp|B1WB06) UPF0624 protein C6orf186 homolog OS=Xenopus tropicalis PE=2 SV=1
SynWH7803_1689 Blast Hits [sprot] FTSH3_SYNY3 (sp|P73437) Cell division protease ftsH homolog 3 OS=Synechocystis sp. (strain PCC 6803) GN=sll1463 PE=3 SV=1
SynWH7803_1722 Blast Hits [sprot] WDR12_IXOSC (sp|B7PY76) Ribosome biogenesis protein WDR12 homolog OS=Ixodes scapularis GN=ISCW009002 PE=3 SV=1
SynWH7803_1733 Blast Hits [sprot] DJC14_BOVIN (sp|Q95J56) DnaJ homolog subfamily C member 14 OS=Bos taurus GN=DNAJC14 PE=1 SV=1
SynWH7803_1758 Blast Hits [sprot] FTSQ_STRCO (sp|P45518) Cell division protein ftsQ homolog OS=Streptomyces coelicolor GN=ftsQ PE=3 SV=2
SynWH7803_1818 Blast Hits [sprot] PTC2_CYNPY (sp|O42334) Protein patched homolog 2 (Fragment) OS=Cynops pyrrhogaster GN=PTC2 PE=2 SV=1
SynWH7803_1827 Blast Hits [sprot] DISP1_HUMAN (sp|Q96F81) Protein dispatched homolog 1 OS=Homo sapiens GN=DISP1 PE=2 SV=3
SynWH7803_1833 Blast Hits [sprot] CRCB_NITWN (sp|Q3SWD2) Protein crcB homolog OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=crcB PE=3 SV=1
SynWH7803_1862 Blast Hits [sprot] CS024_MOUSE (sp|Q9DAZ5) Uncharacterized membrane protein C19orf24 homolog OS=Mus musculus PE=2 SV=1
SynWH7803_1913 Blast Hits [sprot] DLG4_DANRE (sp|Q6R005) Disks large homolog 4 OS=Danio rerio GN=dlg4 PE=2 SV=1
SynWH7803_2050 Blast Hits [sprot] DNJA1_DICDI (sp|Q54ED3) DnaJ homolog subfamily A member 1 homolog OS=Dictyostelium discoideum GN=dnaja1 PE=3 SV=1
SynWH7803_2104 Blast Hits [sprot] CD037_MOUSE (sp|Q8C8J0) Uncharacterized protein C4orf37 homolog OS=Mus musculus PE=2 SV=1
SynWH7803_2124 Blast Hits [sprot] SMC_METJA (sp|Q59037) Chromosome partition protein smc homolog OS=Methanocaldococcus jannaschii GN=MJ1643 PE=3 SV=2
SynWH7803_2154 Blast Hits [sprot] TIF31_ASPCL (sp|A1CKI4) Protein TIF31 homolog OS=Aspergillus clavatus GN=tif31 PE=3 SV=1
SynWH7803_2230 Blast Hits [sprot] CVRA_PSEF5 (sp|Q4KJF1) Cell volume regulation protein A homolog OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=cvrA PE=3 SV=1
SynWH7803_2247 Blast Hits [sprot] RADA_SYNY3 (sp|P74391) DNA repair protein radA homolog OS=Synechocystis sp. (strain PCC 6803) GN=radA PE=3 SV=1
SynWH7803_2297 Blast Hits [sprot] LIVB7_BRUME (sp|Q8YBN1) Leu/Ile/Val-binding protein homolog 7 OS=Brucella melitensis GN=BMEII0868 PE=3 SV=2
SynWH7803_2402 Blast Hits [sprot] NPIIB_TRIRU (sp|C0IPP2) Probable neutral protease 2 homolog B OS=Trichophyton rubrum GN=NpII-B PE=3 SV=1
SynWH7803_2462 Blast Hits [sprot] YGCF_SHIFL (sp|P64556) 7-carboxy-7-deazaguanine synthase homolog OS=Shigella flexneri GN=ygcF PE=3 SV=1
SynWH7803_0044 Blast Hits [TAIR_pep] AT5G54650.2 | Symbols: Fh5, ATFH5 | Fh5 (FORMIN HOMOLOGY5); actin binding | chr5:22197856-22201649 REVERSE
SynWH7803_0050 Blast Hits [TAIR_pep] AT5G48360.1 | Symbols: | formin homology 2 domain-containing protein / FH2 domain-containing protein | chr5:19595716-19598331 FORWARD
SynWH7803_0084 Blast Hits [TAIR_pep] AT4G02070.1 | Symbols: MSH6, MSH6-1, ATMSH6 | MSH6 (MUTS HOMOLOG 6); damaged DNA binding | chr4:906079-912930 FORWARD
SynWH7803_0143 Blast Hits [TAIR_pep] AT1G58807.2 | Symbols: | disease resistance protein (CC-NBS-LRR class), putative / PRM1 homolog, putative | chr1:21780574-21783395 FORWARD
SynWH7803_0171 Blast Hits [TAIR_pep] AT3G18524.1 | Symbols: MSH2, ATMSH2 | MSH2 (MUTS HOMOLOG 2); ATP binding / damaged DNA binding / mismatched DNA binding / protein binding | chr3:6368151-6372409 REVERSE
SynWH7803_0253 Blast Hits [TAIR_pep] ATCG00430.1 | Symbols: PSBG | Encodes a protein which was originally thought to be part of photosystem II but its wheat homolog was later shown to encode for subunit K of NADH dehydrogenase. | chrC:49257-49934 REVERSE
SynWH7803_0261 Blast Hits [TAIR_pep] AT4G11980.1 | Symbols: ATNUDT14, ATNUDX14 | ATNUDX14 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 14); ADP-glucose pyrophosphohydrolase/ ADP-ribose pyrophosphohydrolase/ ADP-sugar diphosphatase/ hydrolase | chr4:7183845-7185551 REVERSE
SynWH7803_0316 Blast Hits [TAIR_pep] AT3G24320.1 | Symbols: MSH1, CHM1, ATMSH1, CHM | MSH1 (MUTL PROTEIN HOMOLOG 1); ATP binding / catalytic/ damaged DNA binding / mismatched DNA binding / nuclease | chr3:8823229-8829571 REVERSE
SynWH7803_0379 Blast Hits [TAIR_pep] AT4G20360.1 | Symbols: ATRAB8D, ATRABE1B | ATRABE1B (ARABIDOPSIS RAB GTPASE HOMOLOG E1B); GTP binding / GTPase/ translation elongation factor | chr4:10990036-10991466 FORWARD
SynWH7803_0416 Blast Hits [TAIR_pep] AT2G18710.1 | Symbols: SCY1 | SCY1 (SecY Homolog 1); P-P-bond-hydrolysis-driven protein transmembrane transporter | chr2:8112231-8114452 REVERSE
SynWH7803_0474 Blast Hits [TAIR_pep] AT5G48840.1 | Symbols: PANC, PTS, ATPTS | PANC (ARABIDOPSIS HOMOLOG OF BACTERIAL PANC); pantoate-beta-alanine ligase/ protein homodimerization | chr5:19803823-19805041 REVERSE
SynWH7803_0494 Blast Hits [TAIR_pep] AT5G26260.1 | Symbols: | meprin and TRAF homology domain-containing protein / MATH domain-containing protein | chr5:9200492-9202153 FORWARD
SynWH7803_0528 Blast Hits [TAIR_pep] AT1G69390.1 | Symbols: ATMINE1 | ATMINE1 (Arabidopsis homologue of bacterial MinE 1); protein binding | chr1:26084721-26086284 FORWARD
SynWH7803_0539 Blast Hits [TAIR_pep] AT1G52500.2 | Symbols: FPG-1, ATFPG-1, ATMMH-1 | ATMMH-1 (ARABIDOPSIS THALIANA MUTM HOMOLOG-1); DNA N-glycosylase | chr1:19560043-19562855 FORWARD
SynWH7803_0607 Blast Hits [TAIR_pep] AT3G01090.2 | Symbols: AKIN10, KIN10 | AKIN10 (Arabidopsis SNF1 kinase homolog 10); protein binding / protein kinase | chr3:31437-34143 REVERSE
SynWH7803_0663 Blast Hits [TAIR_pep] AT1G03050.1 | Symbols: | epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related | chr1:707726-709860 FORWARD
SynWH7803_0690 Blast Hits [TAIR_pep] AT3G20475.1 | Symbols: ATMSH5, MSH5 | MSH5 (MUTS-HOMOLOGUE 5); ATP binding / damaged DNA binding / mismatched DNA binding | chr3:7143546-7150811 FORWARD
SynWH7803_0723 Blast Hits [TAIR_pep] AT2G20010.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Munc13 homology 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25800.1); Has 93 Blast hits to 88 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | chr2:8637977-8640830 REVERSE
SynWH7803_0886 Blast Hits [TAIR_pep] AT2G38440.1 | Symbols: ITB1, SCAR2, DIS3, WAVE4, ATSCAR2 | SCAR2 (SCAR HOMOLOG 2) | chr2:16095550-16100851 FORWARD
SynWH7803_0953 Blast Hits [TAIR_pep] AT1G05020.1 | Symbols: | epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related | chr1:1435384-1437345 REVERSE
SynWH7803_1076 Blast Hits [TAIR_pep] AT1G59910.1 | Symbols: | formin homology 2 domain-containing protein / FH2 domain-containing protein | chr1:22054167-22057052 REVERSE
SynWH7803_1141 Blast Hits [TAIR_pep] AT1G75850.1 | Symbols: VPS35B | VPS35B (VPS35 HOMOLOG B) | chr1:28478053-28483874 REVERSE
SynWH7803_1172 Blast Hits [TAIR_pep] AT5G03550.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: carpel; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: meprin and TRAF homology domain-containing protein / MATH domain-containing protein (TAIR:AT2G42460.1); Has 63 Blast hits to 57 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:895813-896145 REVERSE
SynWH7803_1181 Blast Hits [TAIR_pep] AT5G20070.1 | Symbols: ATNUDT19, ATNUDX19 | ATNUDX19 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 19); hydrolase/ metal ion binding | chr5:6779893-6782308 FORWARD
SynWH7803_1416 Blast Hits [TAIR_pep] AT2G31650.1 | Symbols: ATX1, SDG27 | ATX1 (ARABIDOPSIS HOMOLOGUE OF TRITHORAX); histone-lysine N-methyltransferase/ phosphatidylinositol-5-phosphate binding | chr2:13455448-13462181 REVERSE
SynWH7803_1595 Blast Hits [TAIR_pep] ATCG00600.1 | Symbols: PETG | Cytochrome b6-f complex, subunit V. Disruption of homologous gene in Chlamydomonas results in disruption of cytochrome b6-f complex. | chrC:65998-66111 FORWARD
SynWH7803_1700 Blast Hits [TAIR_pep] AT3G29580.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: meprin and TRAF homology domain-containing protein / MATH domain-containing protein (TAIR:AT3G58210.1); Has 220 Blast hits to 198 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 215; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). | chr3:11394675-11395871 REVERSE
SynWH7803_1730 Blast Hits [TAIR_pep] ATCG00050.1 | Symbols: RPS16 | Homologous to the bacterial ribosomal protein S16 | chrC:5084-6188 REVERSE
SynWH7803_1748 Blast Hits [TAIR_pep] AT3G55630.3 | Symbols: ATDFD | ATDFD (A. THALIANA DHFS-FPGS HOMOLOG D); tetrahydrofolylpolyglutamate synthase | chr3:20636785-20639395 FORWARD
SynWH7803_1914 Blast Hits [TAIR_pep] AT5G24030.1 | Symbols: SLAH3 | SLAH3 (SLAC1 HOMOLOGUE 3); transporter | chr5:8118618-8120993 REVERSE
SynWH7803_1949 Blast Hits [TAIR_pep] AT1G31400.1 | Symbols: | meprin and TRAF homology domain-containing protein / MATH domain-containing protein | chr1:11245225-11246481 REVERSE
SynWH7803_2035 Blast Hits [TAIR_pep] AT4G01900.1 | Symbols: PII, GLB1 | GLB1 (GLNB1 HOMOLOG); acetylglutamate kinase regulator | chr4:821736-823294 FORWARD
SynWH7803_2162 Blast Hits [TAIR_pep] AT2G25800.1 | Symbols: | INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Munc13 homology 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G20010.2); Has 242 Blast hits to 156 proteins in 35 species: Archae - 0; Bacteria - 8; Metazoa - 36; Fungi - 18; Plants - 94; Viruses - 0; Other Eukaryotes - 86 (source: NCBI BLink). | chr2:11006138-11009728 REVERSE
SynWH7803_2342 Blast Hits [TAIR_pep] AT4G02260.2 | Symbols: RSH1, AT-RSH1 | RSH1 (RELA-SPOT HOMOLOG 1); catalytic | chr4:985451-991178 FORWARD

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Gene set by search TXT
ColumnDescription and example
1Data Source Namec.f. Synechocystis
2Gene IDc.f. slr1311
3Category nameone of gene_symbol, gi_gname, definition, function, goterm, interpro, blast_hits and 'Gene and Mutants'.
4DescriptionFree text
SET
ColumnDescription and example
1Gene IDc.f. slr1311
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