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Full-text search result: 115 genes by "950" TXT SET

Synechococcus sp. WH 7803 (115 genes ) TXT SET

SynWH7803_0277 InterPro NULL NULL; Gene3D:G3DSA:3.90.950.10 G3DSA:3.90.950.10
SynWH7803_0351 InterPro IPR003382 Flavoprotein; Gene3D:G3DSA:3.40.50.1950 Flavoprotein
SynWH7803_0388 InterPro IPR014776 Tetrapyrrole methylase, subdomain 2; Gene3D:G3DSA:3.30.950.10 4pyrrole_Mease_sub2
SynWH7803_0431 InterPro IPR014726 Ribosomal protein L2, domain 3; Gene3D:G3DSA:4.10.950.10 Ribosomal_L2
SynWH7803_0676 InterPro NULL NULL; Gene3D:G3DSA:3.90.950.10 G3DSA:3.90.950.10
SynWH7803_0715 InterPro IPR008972 Cupredoxin; superfamily:SSF49503 Cupredoxin
SynWH7803_0753 InterPro IPR008972 Cupredoxin; superfamily:SSF49503 Cupredoxin
SynWH7803_0948 InterPro IPR008972 Cupredoxin; superfamily:SSF49503 Cupredoxin
SynWH7803_0950 Gene product Short-chain dehydrogenase/reductase family enzyme
Function Lipid transport and metabolism: Lipid transport and metabolism
GO term Biological Process: metabolic process (GO:0008152)
GO term Biological Process: oxidation reduction (GO:0055114)
GO term Molecular Function: binding (GO:0005488)
GO term Molecular Function: catalytic activity (GO:0003824)
GO term Molecular Function: oxidoreductase activity (GO:0016491)
InterPro IPR002198 Short-chain dehydrogenase/reductase SDR; FPrintScan:PR00080 SDRFAMILY
InterPro IPR002198 Short-chain dehydrogenase/reductase SDR; HMMPanther:PTHR19410 ADH_short_C2
InterPro IPR002198 Short-chain dehydrogenase/reductase SDR; HMMPfam:PF00106 adh_short
InterPro IPR002347 Glucose/ribitol dehydrogenase; FPrintScan:PR00081 GDHRDH
InterPro IPR016040 NAD(P)-binding domain; Gene3D:G3DSA:3.40.50.720 NAD(P)-bd
InterPro IPR016040 NAD(P)-binding domain; superfamily:SSF51735 NAD(P)-bd
InterPro IPR020904 Short-chain dehydrogenase/reductase, conserved site; PatternScan:PS00061 ADH_SHORT
InterPro NULL NULL; HMMPanther:PTHR19410:SF46 PTHR19410:SF46
Blast Hits [TAIR_pep] AT5G10050.1 | Symbols: | short-chain dehydrogenase/reductase (SDR) family protein | chr5:3144254-3145643 FORWARD
Blast Hits [nr] ref|ZP_01123793.1| oxidoreductase [Synechococcus sp. WH 7805] gi|88787271|gb|EAR18428.1| oxidoreductase [Synechococcus sp. WH 7805]
Blast Hits [pln_est] dbj|EC325585|EC325585 GC08168 Gracilaria changii cDNA library Gracilaria changii cDNA clone n6-t3.txt, mRNA sequence.
Blast Hits [sprot] VDLC_HELPY (sp|O05730) Probable short-chain type dehydrogenase/reductase vdlC OS=Helicobacter pylori GN=vdlC PE=3 SV=2
SynWH7803_0980 InterPro IPR001626 ABC-3; HMMPfam:PF00950 ABC-3
SynWH7803_0989 InterPro IPR001626 ABC-3; HMMPfam:PF00950 ABC-3
SynWH7803_1105 InterPro IPR003382 Flavoprotein; Gene3D:G3DSA:3.40.50.1950 Flavoprotein
SynWH7803_1197 InterPro IPR008972 Cupredoxin; superfamily:SSF49503 Cupredoxin
SynWH7803_1296 InterPro NULL NULL; superfamily:SSF100950 SSF100950
SynWH7803_1398 InterPro IPR012765 Glucosylglycerol-phospate 3-phosphatase; HMMPfam:PF09506 Salt_tol_Pase
SynWH7803_1602 InterPro NULL NULL; superfamily:SSF100950 SSF100950
SynWH7803_1656 InterPro NULL NULL; Gene3D:G3DSA:3.90.950.10 G3DSA:3.90.950.10
SynWH7803_1853 InterPro IPR014776 Tetrapyrrole methylase, subdomain 2; Gene3D:G3DSA:3.30.950.10 4pyrrole_Mease_sub2
SynWH7803_1871 InterPro IPR008972 Cupredoxin; superfamily:SSF49503 Cupredoxin
SynWH7803_1910 InterPro IPR014776 Tetrapyrrole methylase, subdomain 2; Gene3D:G3DSA:3.30.950.10 4pyrrole_Mease_sub2
SynWH7803_1974 InterPro NULL NULL; superfamily:SSF100950 SSF100950
SynWH7803_2066 InterPro NULL NULL; superfamily:SSF100950 SSF100950
SynWH7803_2144 InterPro NULL NULL; superfamily:SSF100950 SSF100950
SynWH7803_2489 InterPro IPR014776 Tetrapyrrole methylase, subdomain 2; Gene3D:G3DSA:3.30.950.10 4pyrrole_Mease_sub2
SynWH7803_2301 InterPro IPR001950 Translation initiation factor SUI1; HMMPfam:PF01253 SUI1
InterPro IPR001950 Translation initiation factor SUI1; ProfileScan:PS50296 SUI1
InterPro IPR001950 Translation initiation factor SUI1; superfamily:SSF55159 TIF_SUI1
SynWH7803_1950 Gene product Conserved hypothetical protein specific to cyanobacteria
Function Replication, recombination and repair: Replication, recombination and repair
Blast Hits [TAIR_pep] AT3G55270.1 | Symbols: MKP1, ATMKP1 | MKP1 (MITOGEN-ACTIVATED PROTEIN KINASE PHOSPHATASE 1); MAP kinase tyrosine/serine/threonine phosphatase | chr3:20496775-20499408 FORWARD
Blast Hits [nr] ref|ZP_01122965.1| hypothetical protein WH7805_12918 [Synechococcus sp. WH 7805] gi|88788667|gb|EAR19822.1| hypothetical protein WH7805_12918 [Synechococcus sp. WH 7805]
Blast Hits [pln_est] gb|FG520406|FG520406 030505KAZB001609HT (KAZB) Actinidia chinensis young fruit library Actinidia chinensis cDNA clone KAZBB00160, mRNA sequence.
Blast Hits [sprot] UVRC_PSEAE (sp|Q9I0Q1) UvrABC system protein C OS=Pseudomonas aeruginosa GN=uvrC PE=3 SV=1
SynWH7803_0521 GO term Biological Process: response to stress (GO:0006950)
SynWH7803_0537 GO term Biological Process: L-methionine salvage from methylthioadenosine (GO:0019509)
SynWH7803_0560 GO term Biological Process: L-methionine salvage from methylthioadenosine (GO:0019509)
SynWH7803_0998 GO term Biological Process: response to stress (GO:0006950)
Blast Hits [TAIR_pep] AT3G20950.1 | Symbols: CYP705A32 | CYP705A32; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr3:7342675-7344744 FORWARD
SynWH7803_1238 GO term Biological Process: response to stress (GO:0006950)
SynWH7803_1517 GO term Biological Process: response to stress (GO:0006950)
SynWH7803_2460 GO term Biological Process: response to stress (GO:0006950)
SynWH7803_2350 GO term Biological Process: response to stress (GO:0006950)
SynWH7803_0168 Blast Hits [nr] ref|ZP_01079081.1| hypothetical protein RS9917_05205 [Synechococcus sp. RS9917] gi|86168950|gb|EAQ70206.1| hypothetical protein RS9917_05205 [Synechococcus sp. RS9917]
SynWH7803_0178 Blast Hits [nr] ref|NP_896223.1| hypothetical protein SYNW0128 [Synechococcus sp. WH 8102] gi|78183739|ref|YP_376173.1| hypothetical protein Syncc9902_0155 [Synechococcus sp. CC9902] gi|78211663|ref|YP_380442.1| hypothetical protein Syncc9605_0111 [Synechococcus sp. CC9605] gi|116071682|ref|ZP_01468950.1| hypothetical protein BL107_06019 [Synechococcus sp. BL107] gi|260435794|ref|ZP_05789764.1| conserved hypothetical protein [Synechococcus sp. WH 8109] gi|33632187|emb|CAE06643.1| conserved hypothetical protein [Synechococcus sp. WH 8102] gi|78168033|gb|ABB25130.1| conserved hypothetical protein [Synechococcus sp. CC9902] gi|78196122|gb|ABB33887.1| conserved hypothetical protein [Synechococcus sp. CC9605] gi|116065305|gb|EAU71063.1| hypothetical protein BL107_06019 [Synechococcus sp. BL107] gi|260413668|gb|EEX06964.1| conserved hypothetical protein [Synechococcus sp. WH 8109]
SynWH7803_0272 Blast Hits [TAIR_pep] AT2G15970.1 | Symbols: COR413-PM1, WCOR413, WCOR413-LIKE, ATCOR413-PM1, FL3-5A3 | COR413-PM1 | chr2:6950163-6951012 FORWARD
Blast Hits [nr] ref|YP_729503.1| transporter, MFS family protein [Synechococcus sp. CC9311] gi|113881952|gb|ABI46910.1| possible transporter, MFS family protein [Synechococcus sp. CC9311]
SynWH7803_0408 Blast Hits [nr] ref|ZP_01123422.1| 50S ribosomal protein L13 [Synechococcus sp. WH 7805] gi|88787950|gb|EAR19106.1| 50S ribosomal protein L13 [Synechococcus sp. WH 7805]
SynWH7803_0687 Blast Hits [nr] ref|ZP_01123248.1| CO2 hydration protein [Synechococcus sp. WH 7805] gi|88788950|gb|EAR20105.1| CO2 hydration protein [Synechococcus sp. WH 7805]
SynWH7803_0903 Blast Hits [nr] ref|YP_001226950.1| hypothetical protein SynRCC307_0694 [Synechococcus sp. RCC307] gi|147850103|emb|CAK27597.1| Conserved hypothetical protein [Synechococcus sp. RCC307]
SynWH7803_0973 Blast Hits [nr] ref|ZP_01079950.1| hypothetical protein RS9917_10831 [Synechococcus sp. RS9917] gi|86168669|gb|EAQ69926.1| hypothetical protein RS9917_10831 [Synechococcus sp. RS9917]
SynWH7803_0992 Blast Hits [nr] ref|YP_730950.1| hypothetical protein sync_1746 [Synechococcus sp. CC9311] gi|113880667|gb|ABI45625.1| conserved hypothetical protein [Synechococcus sp. CC9311]
SynWH7803_1077 Blast Hits [nr] ref|ZP_01123950.1| hypothetical protein WH7805_02082 [Synechococcus sp. WH 7805] gi|88787428|gb|EAR18585.1| hypothetical protein WH7805_02082 [Synechococcus sp. WH 7805]
SynWH7803_1625 Blast Hits [nr] ref|ZP_01124517.1| fatty acid desaturase, type 2 [Synechococcus sp. WH 7805] gi|88786950|gb|EAR18108.1| fatty acid desaturase, type 2 [Synechococcus sp. WH 7805]
SynWH7803_1870 Blast Hits [nr] ref|ZP_01123093.1| hypothetical protein WH7805_13558 [Synechococcus sp. WH 7805] gi|88788795|gb|EAR19950.1| hypothetical protein WH7805_13558 [Synechococcus sp. WH 7805]
SynWH7803_1947 Blast Hits [nr] ref|ZP_01079527.1| hypothetical protein RS9917_08716 [Synechococcus sp. RS9917] gi|86168246|gb|EAQ69503.1| hypothetical protein RS9917_08716 [Synechococcus sp. RS9917]
SynWH7803_1964 Blast Hits [nr] ref|ZP_01122950.1| circadian clock protein KaiC [Synechococcus sp. WH 7805] gi|88788652|gb|EAR19807.1| circadian clock protein KaiC [Synechococcus sp. WH 7805]
SynWH7803_2210 Blast Hits [nr] ref|ZP_01122652.1| hypothetical protein WH7805_11353 [Synechococcus sp. WH 7805] gi|88788354|gb|EAR19509.1| hypothetical protein WH7805_11353 [Synechococcus sp. WH 7805]
SynWH7803_2211 Blast Hits [nr] ref|ZP_01122650.1| RibD/ribG C-terminal domain [Synechococcus sp. WH 7805] gi|88788352|gb|EAR19507.1| RibD/ribG C-terminal domain [Synechococcus sp. WH 7805]
SynWH7803_2212 Blast Hits [nr] ref|ZP_01122649.1| 6-pyruvoyltetrahydropterin synthase [Synechococcus sp. WH 7805] gi|88788351|gb|EAR19506.1| 6-pyruvoyltetrahydropterin synthase [Synechococcus sp. WH 7805]
SynWH7803_2213 Blast Hits [nr] ref|ZP_01122648.1| shikimate kinase [Synechococcus sp. WH 7805] gi|88788350|gb|EAR19505.1| shikimate kinase [Synechococcus sp. WH 7805]
SynWH7803_2214 Blast Hits [nr] ref|ZP_01122647.1| hypothetical protein WH7805_11328 [Synechococcus sp. WH 7805] gi|88788349|gb|EAR19504.1| hypothetical protein WH7805_11328 [Synechococcus sp. WH 7805]
SynWH7803_2215 Blast Hits [nr] ref|ZP_01122646.1| hypothetical protein WH7805_11323 [Synechococcus sp. WH 7805] gi|88788348|gb|EAR19503.1| hypothetical protein WH7805_11323 [Synechococcus sp. WH 7805]
SynWH7803_2216 Blast Hits [nr] ref|ZP_01122645.1| putative glutathione S-transferase [Synechococcus sp. WH 7805] gi|88788347|gb|EAR19502.1| putative glutathione S-transferase [Synechococcus sp. WH 7805]
SynWH7803_2217 Blast Hits [nr] ref|ZP_01122644.1| hypothetical protein WH7805_11313 [Synechococcus sp. WH 7805] gi|88788346|gb|EAR19501.1| hypothetical protein WH7805_11313 [Synechococcus sp. WH 7805]
SynWH7803_2218 Blast Hits [nr] ref|ZP_01122643.1| possible Ribosome-binding factor A [Synechococcus sp. WH 7805] gi|88788345|gb|EAR19500.1| possible Ribosome-binding factor A [Synechococcus sp. WH 7805]
SynWH7803_2518 Blast Hits [nr] ref|ZP_01124886.1| hypothetical protein WH7805_09509 [Synechococcus sp. WH 7805] gi|88786597|gb|EAR17756.1| hypothetical protein WH7805_09509 [Synechococcus sp. WH 7805]
SynWH7803_0658 Blast Hits [sprot] GCH1_ERWT9 (sp|B2VII2) GTP cyclohydrolase 1 OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=folE PE=3 SV=1
SynWH7803_0970 Blast Hits [sprot] HEM1_YEAST (sp|P09950) 5-aminolevulinate synthase, mitochondrial OS=Saccharomyces cerevisiae GN=HEM1 PE=1 SV=1
SynWH7803_0031 Blast Hits [pln_est] dbj|DC950488|DC950488 DC950488 ppgs full-length cDNA library; green sporophytes Physcomitrella patens subsp. patens cDNA clone ppgs25b02 3', mRNA sequence.
SynWH7803_0663 Blast Hits [pln_est] gb|CT950382|CT950382 CT950382 Phaeodactylum tricornutum high decadienal treated (5 ug/ml 2E, 4E-decadienal for 6 hours) Phaeodactylum tricornutum cDNA 5', mRNA sequence.
SynWH7803_0919 Blast Hits [pln_est] gb|CT950382|CT950382 CT950382 Phaeodactylum tricornutum high decadienal treated (5 ug/ml 2E, 4E-decadienal for 6 hours) Phaeodactylum tricornutum cDNA 5', mRNA sequence.
SynWH7803_1185 Blast Hits [pln_est] dbj|EX399503|EX399503 GQ03415.B7_P18 GQ034 - Needles - Mid-season Picea glauca cDNA clone GQ03415_P18 5', mRNA sequence.
SynWH7803_1341 Blast Hits [pln_est] dbj|DR917961|DR917961 EST1109500 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1LY59, mRNA sequence.
SynWH7803_1366 Blast Hits [pln_est] dbj|DR916950|DR916950 EST1108489 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1LS55, mRNA sequence.
SynWH7803_1588 Blast Hits [pln_est] dbj|DY295001|DY295001 IC0AAA87AD05RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
SynWH7803_1884 Blast Hits [pln_est] gb|GO799507|GO799507 CLS_cLiFpEfI12na_73a1_1_h09cLibkit5LD_H09 CLS_cLiFpEfI12na_plant Festuca pratensis cDNA clone 73h09 5', mRNA sequence.
SynWH7803_1979 Blast Hits [pln_est] gb|CT895080|CT895080 CT895080 Phaeodactylum tricornutum low decadienal treated (0.5 ug/ml 2E, 4E-decadienal for 6 hours) Phaeodactylum tricornutum cDNA 5', mRNA sequence.
SynWH7803_2231 Blast Hits [pln_est] gb|FC409509|FC409509 CAYZ30277.rev CAYZ Physcomitrella patens subsp. patens Villersexel - regular (L) Physcomitrella patens subsp. patens cDNA clone CAYZ30277 3', mRNA sequence.
SynWH7803_0026 Blast Hits [TAIR_pep] AT4G30620.1 | Symbols: | unknown protein | chr4:14948724-14950035 REVERSE
SynWH7803_0073 Blast Hits [TAIR_pep] AT3G60880.2 | Symbols: DHDPS, DHDPS1 | dihydrodipicolinate synthase 1 (DHDPS1) (DHDPS) (DHPS1) | chr3:22495086-22496542 FORWARD
SynWH7803_0231 Blast Hits [TAIR_pep] AT1G79500.4 | Symbols: AtkdsA1 | 2-dehydro-3-deoxyphosphooctonate aldolase / phospho-2-dehydro-3-deoxyoctonate aldolase / 3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase (KDSA) | chr1:29903604-29905989 FORWARD
SynWH7803_0301 Blast Hits [TAIR_pep] AT1G11950.1 | Symbols: | transcription factor | chr1:4034747-4038310 REVERSE
SynWH7803_0319 Blast Hits [TAIR_pep] AT5G15250.1 | Symbols: FTSH6, ATFTSH6 | FTSH6 (FTSH PROTEASE 6); ATP-dependent peptidase/ ATPase/ metallopeptidase/ peptidase/ zinc ion binding | chr5:4950411-4952777 REVERSE
SynWH7803_0337 Blast Hits [TAIR_pep] AT4G30950.1 | Symbols: FAD6, FADC, SFD4 | FAD6 (FATTY ACID DESATURASE 6); omega-6 fatty acid desaturase | chr4:15057278-15059673 REVERSE
SynWH7803_0347 Blast Hits [TAIR_pep] AT2G27980.1 | Symbols: | protein binding / zinc ion binding | chr2:11913950-11919741 REVERSE
SynWH7803_0409 Blast Hits [TAIR_pep] AT3G06950.1 | Symbols: | tRNA pseudouridine synthase family protein | chr3:2192869-2194254 FORWARD
SynWH7803_0527 Blast Hits [TAIR_pep] AT3G10310.1 | Symbols: | ATP binding / microtubule motor | chr3:3190208-3195005 FORWARD
SynWH7803_0570 Blast Hits [TAIR_pep] AT5G44950.1 | Symbols: | F-box family protein | chr5:18151665-18153164 FORWARD
SynWH7803_0589 Blast Hits [TAIR_pep] AT4G30950.1 | Symbols: FAD6, FADC, SFD4 | FAD6 (FATTY ACID DESATURASE 6); omega-6 fatty acid desaturase | chr4:15057278-15059673 REVERSE
SynWH7803_0711 Blast Hits [TAIR_pep] AT1G62085.1 | Symbols: | mitochondrial transcription termination factor family protein / mTERF family protein | chr1:22948757-22950142 REVERSE
SynWH7803_0798 Blast Hits [TAIR_pep] AT1G05900.2 | Symbols: ATNTH2 | endonuclease-related | chr1:1786896-1789502 FORWARD
SynWH7803_0857 Blast Hits [TAIR_pep] AT2G22360.1 | Symbols: | DNAJ heat shock family protein | chr2:9498162-9500459 FORWARD
SynWH7803_0902 Blast Hits [TAIR_pep] AT1G09250.1 | Symbols: | transcription factor | chr1:2989509-2990132 FORWARD
SynWH7803_0955 Blast Hits [TAIR_pep] AT2G32950.1 | Symbols: COP1, ATCOP1, DET340, FUS1, EMB168 | COP1 (CONSTITUTIVE PHOTOMORPHOGENIC 1); protein binding / ubiquitin-protein ligase | chr2:13978000-13983282 FORWARD
SynWH7803_1028 Blast Hits [TAIR_pep] AT5G12950.1 | Symbols: | catalytic | chr5:4093117-4096806 FORWARD
SynWH7803_1057 Blast Hits [TAIR_pep] AT1G01610.1 | Symbols: ATGPAT4, GPAT4 | GPAT4 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 4); 1-acylglycerol-3-phosphate O-acyltransferase/ acyltransferase | chr1:221950-224255 REVERSE
SynWH7803_1116 Blast Hits [TAIR_pep] AT2G30950.1 | Symbols: VAR2, FTSH2 | VAR2 (VARIEGATED 2); ATP-dependent peptidase/ ATPase/ metallopeptidase/ zinc ion binding | chr2:13174692-13177064 FORWARD
SynWH7803_1121 Blast Hits [TAIR_pep] AT5G26880.1 | Symbols: | tRNA/rRNA methyltransferase (SpoU) family protein | chr5:9457950-9459190 REVERSE
SynWH7803_1208 Blast Hits [TAIR_pep] AT1G43980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr1:16685832-16689502 REVERSE
SynWH7803_1216 Blast Hits [TAIR_pep] AT2G30950.1 | Symbols: VAR2, FTSH2 | VAR2 (VARIEGATED 2); ATP-dependent peptidase/ ATPase/ metallopeptidase/ zinc ion binding | chr2:13174692-13177064 FORWARD
SynWH7803_1247 Blast Hits [TAIR_pep] AT2G22360.1 | Symbols: | DNAJ heat shock family protein | chr2:9498162-9500459 FORWARD
SynWH7803_1315 Blast Hits [TAIR_pep] AT5G27470.1 | Symbols: | seryl-tRNA synthetase / serine--tRNA ligase | chr5:9695087-9697154 FORWARD
SynWH7803_1321 Blast Hits [TAIR_pep] AT2G01440.1 | Symbols: | ATP binding / ATP-dependent DNA helicase/ ATP-dependent helicase/ helicase/ nucleic acid binding | chr2:193950-199056 REVERSE
SynWH7803_1367 Blast Hits [TAIR_pep] AT3G27190.1 | Symbols: | uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative | chr3:10039504-10042917 REVERSE
SynWH7803_1423 Blast Hits [TAIR_pep] AT3G02950.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Tho complex subunit 7 (InterPro:IPR018018), Tho complex subunit 7/Mft1p (InterPro:IPR008501); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16790.1); Has 2049 Blast hits to 1787 proteins in 271 species: Archae - 31; Bacteria - 158; Metazoa - 1041; Fungi - 168; Plants - 75; Viruses - 26; Other Eukaryotes - 550 (source: NCBI BLink). | chr3:665631-666439 REVERSE
SynWH7803_1430 Blast Hits [TAIR_pep] AT3G61950.2 | Symbols: | basic helix-loop-helix (bHLH) family protein | chr3:22940231-22941332 FORWARD
SynWH7803_1554 Blast Hits [TAIR_pep] AT5G65950.1 | Symbols: | unknown protein | chr5:26380290-26384960 FORWARD
SynWH7803_1562 Blast Hits [TAIR_pep] AT4G14290.1 | Symbols: | LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23540.1); Has 2977 Blast hits to 1894 proteins in 536 species: Archae - 16; Bacteria - 950; Metazoa - 424; Fungi - 111; Plants - 88; Viruses - 19; Other Eukaryotes - 1369 (source: NCBI BLink). | chr4:8225547-8230057 REVERSE
SynWH7803_1580 Blast Hits [TAIR_pep] AT1G60950.1 | Symbols: FED A, ATFD2 | FED A; 2 iron, 2 sulfur cluster binding / electron carrier/ iron-sulfur cluster binding | chr1:22444565-22445011 FORWARD
SynWH7803_1608 Blast Hits [TAIR_pep] AT1G04950.3 | Symbols: TAFII59 | TAF6 (TBP-ASSOCIATED FACTOR 6); DNA binding / RNA polymerase II transcription factor/ transcription initiation factor | chr1:1403606-1407184 REVERSE
SynWH7803_1630 Blast Hits [TAIR_pep] AT3G52950.1 | Symbols: | CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein | chr3:19634866-19636536 FORWARD
SynWH7803_1783 Blast Hits [TAIR_pep] AT4G04950.1 | Symbols: | thioredoxin family protein | chr4:2517882-2519924 REVERSE
SynWH7803_1813 Blast Hits [TAIR_pep] AT4G03950.1 | Symbols: | glucose-6-phosphate/phosphate translocator, putative | chr4:1879518-1881111 FORWARD
SynWH7803_1903 Blast Hits [TAIR_pep] AT2G30950.1 | Symbols: VAR2, FTSH2 | VAR2 (VARIEGATED 2); ATP-dependent peptidase/ ATPase/ metallopeptidase/ zinc ion binding | chr2:13174692-13177064 FORWARD
SynWH7803_1905 Blast Hits [TAIR_pep] AT5G27470.1 | Symbols: | seryl-tRNA synthetase / serine--tRNA ligase | chr5:9695087-9697154 FORWARD
SynWH7803_1968 Blast Hits [TAIR_pep] AT5G40950.1 | Symbols: RPL27 | RPL27 (RIBOSOMAL PROTEIN LARGE SUBUNIT 27); structural constituent of ribosome | chr5:16410866-16411845 FORWARD
SynWH7803_2033 Blast Hits [TAIR_pep] AT5G63950.1 | Symbols: CHR24 | CHR24 (chromatin remodeling 24); ATP binding / DNA binding / helicase/ nucleic acid binding | chr5:25592160-25598405 REVERSE
SynWH7803_2039 Blast Hits [TAIR_pep] AT5G50950.2 | Symbols: | fumarate hydratase, putative / fumarase, putative | chr5:20729687-20733636 FORWARD
SynWH7803_2253 Blast Hits [TAIR_pep] AT2G32950.1 | Symbols: COP1, ATCOP1, DET340, FUS1, EMB168 | COP1 (CONSTITUTIVE PHOTOMORPHOGENIC 1); protein binding / ubiquitin-protein ligase | chr2:13978000-13983282 FORWARD
SynWH7803_2260 Blast Hits [TAIR_pep] AT5G57950.1 | Symbols: | 26S proteasome regulatory subunit, putative | chr5:23460765-23462128 FORWARD
SynWH7803_2395 Blast Hits [TAIR_pep] AT4G15950.1 | Symbols: NRPD4, NRPE4 | NRPD4 | chr4:9040743-9041883 FORWARD
SynWH7803_2400 Blast Hits [TAIR_pep] AT5G63950.1 | Symbols: CHR24 | CHR24 (chromatin remodeling 24); ATP binding / DNA binding / helicase/ nucleic acid binding | chr5:25592160-25598405 REVERSE
SynWH7803_2496 Blast Hits [TAIR_pep] AT2G20950.1 | Symbols: | EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase-like, arabidopsis (InterPro:IPR007942); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38550.1); Has 618 Blast hits to 562 proteins in 105 species: Archae - 7; Bacteria - 22; Metazoa - 391; Fungi - 75; Plants - 96; Viruses - 2; Other Eukaryotes - 25 (source: NCBI BLink). | chr2:9003295-9005354 FORWARD
SynWH7803_2531 Blast Hits [TAIR_pep] AT1G79600.1 | Symbols: | ABC1 family protein | chr1:29950105-29952516 REVERSE

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ColumnDescription and example
1Data Source Namec.f. Synechocystis
2Gene IDc.f. slr1311
3Category nameone of gene_symbol, gi_gname, definition, function, goterm, interpro, blast_hits and 'Gene and Mutants'.
4DescriptionFree text
SET
ColumnDescription and example
1Gene IDc.f. slr1311
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