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Full-text search result: 24 genes by "2S" TXT SET

Synechococcus sp. WH 7803 (24 genes ) TXT SET

SynWH7803_0019 InterPro IPR001992 Type II secretion system conserved site; PatternScan:PS00874 T2SP_F
SynWH7803_0020 InterPro IPR001482 Type II secretion system protein E; PatternScan:PS00662 T2SP_E
SynWH7803_0163 InterPro IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif; HMMPfam:PF10576 EndIII_4Fe-2S
SynWH7803_0519 InterPro IPR001041 Ferredoxin; ProfileScan:PS51085 2FE2S_FER_2
Blast Hits [nr] ref|ZP_01123311.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. WH 7805] gi|88787839|gb|EAR18995.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. WH 7805]
Blast Hits [sprot] FER_PSEAE (sp|Q51383) 2Fe-2S ferredoxin OS=Pseudomonas aeruginosa GN=fdx PE=3 SV=2
SynWH7803_0625 InterPro IPR001041 Ferredoxin; ProfileScan:PS51085 2FE2S_FER_2
Blast Hits [nr] ref|ZP_01123184.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. WH 7805] gi|88788886|gb|EAR20041.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. WH 7805]
SynWH7803_0812 InterPro IPR017941 Rieske [2Fe-2S] iron-sulphur domain; Gene3D:G3DSA:2.102.10.10 Rieske_reg
InterPro IPR017941 Rieske [2Fe-2S] iron-sulphur domain; HMMPfam:PF00355 Rieske
InterPro IPR017941 Rieske [2Fe-2S] iron-sulphur domain; ProfileScan:PS51296 RIESKE
InterPro IPR017941 Rieske [2Fe-2S] iron-sulphur domain; superfamily:SSF50022 Rieske_dom
SynWH7803_1049 Gene product Predicted membrane protein fused with a rieske [2Fe-2S] domain
InterPro IPR017941 Rieske [2Fe-2S] iron-sulphur domain; Gene3D:G3DSA:2.102.10.10 Rieske_reg
InterPro IPR017941 Rieske [2Fe-2S] iron-sulphur domain; HMMPfam:PF00355 Rieske
InterPro IPR017941 Rieske [2Fe-2S] iron-sulphur domain; ProfileScan:PS51296 RIESKE
InterPro IPR017941 Rieske [2Fe-2S] iron-sulphur domain; superfamily:SSF50022 Rieske_dom
Blast Hits [nr] ref|YP_001518456.1| Rieske domain-containing protein [Acaryochloris marina MBIC11017] gi|158307522|gb|ABW29139.1| Predicted membrane protein fused with a rieske [2Fe-2S] domain [Acaryochloris marina MBIC11017]
SynWH7803_1242 InterPro IPR001041 Ferredoxin; ProfileScan:PS51085 2FE2S_FER_2
SynWH7803_1580 InterPro IPR001041 Ferredoxin; ProfileScan:PS51085 2FE2S_FER_2
InterPro IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site; PatternScan:PS00197 2FE2S_FER_1
InterPro IPR010241 Ferredoxin [2Fe-2S], plant; HMMTigr:TIGR02008 fdx_plant
SynWH7803_1659 InterPro IPR001041 Ferredoxin; ProfileScan:PS51085 2FE2S_FER_2
InterPro IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site; PatternScan:PS00197 2FE2S_FER_1
SynWH7803_1841 InterPro IPR001482 Type II secretion system protein E; PatternScan:PS00662 T2SP_E
SynWH7803_1850 InterPro IPR017941 Rieske [2Fe-2S] iron-sulphur domain; Gene3D:G3DSA:2.102.10.10 Rieske_reg
InterPro IPR017941 Rieske [2Fe-2S] iron-sulphur domain; HMMPfam:PF00355 Rieske
InterPro IPR017941 Rieske [2Fe-2S] iron-sulphur domain; ProfileScan:PS51296 RIESKE
InterPro IPR017941 Rieske [2Fe-2S] iron-sulphur domain; superfamily:SSF50022 Rieske_dom
SynWH7803_1979 InterPro IPR001041 Ferredoxin; ProfileScan:PS51085 2FE2S_FER_2
InterPro IPR001041 Ferredoxin; superfamily:SSF54292 2Fe-2S ferredoxin-like
InterPro IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site; PatternScan:PS00197 2FE2S_FER_1
InterPro IPR010241 Ferredoxin [2Fe-2S], plant; HMMTigr:TIGR02008 fdx_plant: ferredoxin [2Fe-2S]
Blast Hits [nr] ref|ZP_01468531.1| Ferredoxin (2Fe-2S) [Synechococcus sp. BL107] gi|116066667|gb|EAU72424.1| Ferredoxin (2Fe-2S) [Synechococcus sp. BL107]
SynWH7803_2014 InterPro IPR001041 Ferredoxin; ProfileScan:PS51085 2FE2S_FER_2
InterPro IPR010241 Ferredoxin [2Fe-2S], plant; HMMTigr:TIGR02008 fdx_plant
Blast Hits [nr] ref|ZP_01122896.1| Ferredoxin (2Fe-2S) [Synechococcus sp. WH 7805] gi|88788598|gb|EAR19753.1| Ferredoxin (2Fe-2S) [Synechococcus sp. WH 7805]
SynWH7803_2265 InterPro IPR017941 Rieske [2Fe-2S] iron-sulphur domain; Gene3D:G3DSA:2.102.10.10 Rieske_reg
InterPro IPR017941 Rieske [2Fe-2S] iron-sulphur domain; HMMPfam:PF00355 Rieske
InterPro IPR017941 Rieske [2Fe-2S] iron-sulphur domain; ProfileScan:PS51296 RIESKE
InterPro IPR017941 Rieske [2Fe-2S] iron-sulphur domain; superfamily:SSF50022 Rieske_dom
SynWH7803_0236 Blast Hits [sprot] RSMG_SALRD (sp|Q2S6G7) Ribosomal RNA small subunit methyltransferase G OS=Salinibacter ruber (strain DSM 13855) GN=rsmG PE=3 SV=1
SynWH7803_1068 Blast Hits [sprot] GPDA_METPP (sp|A2SDP0) Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Methylibium petroleiphilum (strain PM1) GN=gpsA PE=3 SV=1
SynWH7803_1354 Blast Hits [sprot] SELU_SHEDO (sp|Q12SQ2) tRNA 2-selenouridine synthase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=selU PE=3 SV=1
SynWH7803_1624 Blast Hits [sprot] FER2_CLOPA (sp|P07324) Ferredoxin, 2Fe-2S OS=Clostridium pasteurianum PE=1 SV=1
SynWH7803_1642 Blast Hits [sprot] TRM1_METLZ (sp|A2SRK9) N(2),N(2)-dimethylguanosine tRNA methyltransferase OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=trm1 PE=3 SV=1
SynWH7803_1650 Blast Hits [sprot] UBIA_METPP (sp|A2SMA7) 4-hydroxybenzoate octaprenyltransferase OS=Methylibium petroleiphilum (strain PM1) GN=ubiA PE=3 SV=1
SynWH7803_0156 Blast Hits [pln_est] gb|FG598406|FG598406 PFRT_T3_48R_A02_22SEP2003_016 Opium poppy root cDNA library Papaver somniferum cDNA, mRNA sequence.
SynWH7803_0921 Blast Hits [pln_est] gb|FC919359|FC919359 C08031B12SK PhyRootCl1 Citrus reshni cDNA clone C08031B12, mRNA sequence.
SynWH7803_2166 Blast Hits [pln_est] gb|FG598406|FG598406 PFRT_T3_48R_A02_22SEP2003_016 Opium poppy root cDNA library Papaver somniferum cDNA, mRNA sequence.

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Gene set by search TXT
ColumnDescription and example
1Data Source Namec.f. Synechocystis
2Gene IDc.f. slr1311
3Category nameone of gene_symbol, gi_gname, definition, function, goterm, interpro, blast_hits and 'Gene and Mutants'.
4DescriptionFree text
SET
ColumnDescription and example
1Gene IDc.f. slr1311
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