in ?
cyanobase » Synechococcus sp. WH 7803 » genes » search

Full-text search result: 191 genes by "248" TXT SET

Synechococcus sp. WH 7803 (191 genes ) TXT SET

SynWH7803_0248 Gene product cytochrome b559 subunit beta
Gene symbol psbF
Function Not in COGs: Not in COGs
GO term Biological Process: photosynthesis (GO:0015979)
GO term Biological Process: photosynthesis, light reaction (GO:0019684)
GO term Biological Process: photosynthetic electron transport chain (GO:0009767)
GO term Cellular Component: integral to membrane (GO:0016021)
GO term Cellular Component: photosystem II (GO:0009523)
GO term Cellular Component: photosystem II reaction center (GO:0009539)
GO term Cellular Component: plastid (GO:0009536)
GO term Cellular Component: thylakoid (GO:0009579)
GO term Molecular Function: heme binding (GO:0020037)
GO term Molecular Function: metal ion binding (GO:0046872)
InterPro IPR006216 Photosystem II protein cytochrome b559, conserved site; PatternScan:PS00537 CYTOCHROME_B559
InterPro IPR006241 Photosystem II protein cytochrome b559, beta subunit; HMMPIR:PIRSF000037 PsbF
InterPro IPR006241 Photosystem II protein cytochrome b559, beta subunit; HMMTigr:TIGR01333 cyt_b559_beta
InterPro IPR013081 Photosystem II protein cytochrome b559, N-terminal; HMMPfam:PF00283 Cytochrom_B559
Blast Hits [TAIR_pep] ATCG00570.1 | Symbols: PSBF | PSII cytochrome b559 | chrC:63942-64061 REVERSE
Blast Hits [nr] ref|ZP_01123598.1| cytochrome b559 subunit beta [Synechococcus sp. WH 7805] gi|88788126|gb|EAR19282.1| cytochrome b559 subunit beta [Synechococcus sp. WH 7805]
Blast Hits [pln_est] gb|CI020301|CI020301 CI020301 Oryza sativa (japonica cultivar-group) green shoot Oryza sativa Japonica Group cDNA clone 007-M063R-C09 3', mRNA sequence.
Blast Hits [sprot] PSBF_SYNPX (sp|Q7U9Q0) Cytochrome b559 subunit beta OS=Synechococcus sp. (strain WH8102) GN=psbF PE=3 SV=1
SynWH7803_0385 InterPro IPR002489 Glutamate synthase, alpha subunit, C-terminal; HMMPfam:PF01493 GXGXG
InterPro IPR002489 Glutamate synthase, alpha subunit, C-terminal; superfamily:SSF69336 Glu_synthase_C
SynWH7803_0470 InterPro IPR001395 Aldo/keto reductase; HMMPfam:PF00248 Aldo_ket_red
SynWH7803_0523 InterPro IPR003488 DNA recombination-mediator protein A; HMMPfam:PF02481 DNA_processg_A
SynWH7803_0543 InterPro IPR002482 Peptidoglycan-binding Lysin subgroup; HMMSmart:SM00257 LysM
SynWH7803_0578 InterPro IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein; HMMPfam:PF02482 Ribosomal_S30AE
SynWH7803_0688 InterPro IPR001533 Transcriptional coactivator/pterin dehydratase; superfamily:SSF55248 Trans_pterinDh
SynWH7803_0953 InterPro IPR007361 Protein of unknown function DUF427; HMMPfam:PF04248 DUF427
SynWH7803_1120 InterPro IPR002482 Peptidoglycan-binding Lysin subgroup; HMMSmart:SM00257 LysM
SynWH7803_1162 InterPro IPR002481 Ferric-uptake regulator; HMMPfam:PF01475 FUR
SynWH7803_1184 InterPro IPR007361 Protein of unknown function DUF427; HMMPfam:PF04248 DUF427
SynWH7803_1248 Gene product hypothetical protein
Function Not in COGs: Not in COGs
InterPro IPR021503 Protein of unknown function DUF3110; HMMPfam:PF11360 DUF3110
Blast Hits [TAIR_pep] AT1G13990.1 | Symbols: | unknown protein | chr1:4794810-4796476 FORWARD
Blast Hits [nr] ref|ZP_01124079.1| hypothetical protein WH7805_02727 [Synechococcus sp. WH 7805] gi|88787557|gb|EAR18714.1| hypothetical protein WH7805_02727 [Synechococcus sp. WH 7805]
Blast Hits [pln_est] dbj|EG721576|EG721576 GTE00011388 Guillardia theta non-normalised Guillardia theta cDNA, mRNA sequence.
Blast Hits [sprot] SYL_PELTS (sp|A5D416) Leucyl-tRNA synthetase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=leuS PE=3 SV=1
SynWH7803_1370 InterPro IPR019616 Protein of unknown function DUF2488; HMMPfam:PF10674 DUF2488
SynWH7803_1392 InterPro IPR002481 Ferric-uptake regulator; HMMPfam:PF01475 FUR
SynWH7803_1805 InterPro IPR001533 Transcriptional coactivator/pterin dehydratase; superfamily:SSF55248 Trans_pterinDh
SynWH7803_1828 InterPro IPR003488 DNA recombination-mediator protein A; HMMPfam:PF02481 DNA_processg_A
SynWH7803_1878 InterPro IPR001395 Aldo/keto reductase; HMMPfam:PF00248 Aldo_ket_red
SynWH7803_2052 InterPro IPR001395 Aldo/keto reductase; HMMPfam:PF00248 Aldo_ket_red
SynWH7803_2159 InterPro NULL NULL; HMMPanther:PTHR21248 PTHR21248
SynWH7803_2447 InterPro IPR002481 Ferric-uptake regulator; HMMPfam:PF01475 FUR
SynWH7803_2480 Gene product Nitrate/nitrite transporter, MFS family
Function Inorganic ion transport and metabolism: Inorganic ion transport and metabolism
GO term Biological Process: inorganic anion transport (GO:0015698)
GO term Biological Process: transmembrane transport (GO:0055085)
GO term Cellular Component: integral to membrane (GO:0016021)
GO term Molecular Function: inorganic anion transmembrane transporter activity (GO:0015103)
InterPro IPR004737 Nitrate transporter; HMMTigr:TIGR00886 2A0108
InterPro IPR011701 Major facilitator superfamily MFS-1; HMMPfam:PF07690 MFS_1
InterPro IPR016196 Major facilitator superfamily, general substrate transporter; superfamily:SSF103473 MFS_gen_substrate_transporter
InterPro NULL NULL; HMMPanther:PTHR10074 PTHR10074
InterPro NULL NULL; HMMPanther:PTHR10074:SF2 PTHR10074:SF2
InterPro NULL NULL; ProfileScan:PS50850 MFS
Blast Hits [TAIR_pep] AT3G45060.1 | Symbols: ATNRT2.6, NRT2.6 | ATNRT2.6; nitrate transmembrane transporter | chr3:16477671-16479386 REVERSE
Blast Hits [nr] ref|ZP_01124929.1| Nitrate transporter [Synechococcus sp. WH 7805] gi|88786640|gb|EAR17799.1| Nitrate transporter [Synechococcus sp. WH 7805]
Blast Hits [pln_est] gb|FC505499|FC505499 CAAI8414.fwd CAAI Thalassiosira pseudonana Thaps_R2 N+ 1-2kb Thalassiosira pseudonana cDNA clone CAAI8414 5', mRNA sequence.
Blast Hits [sprot] CRNA_EMENI (sp|P22152) Nitrate transporter OS=Emericella nidulans GN=crnA PE=2 SV=2
SynWH7803_2481 Gene product Nitrate reductase
Gene symbol narB
Function Energy production and conversion: Energy production and conversion
GO term Molecular Function: binding (GO:0005488)
GO term Molecular Function: molybdenum ion binding (GO:0030151)
GO term Molecular Function: oxidoreductase activity (GO:0016491)
InterPro IPR006656 Molybdopterin oxidoreductase; HMMPfam:PF00384 Molybdopterin
InterPro IPR006657 Molydopterin dinucleotide-binding domain; HMMPfam:PF01568 Molydop_binding
InterPro IPR006963 Molybdopterin oxidoreductase, Fe4S4 domain; HMMPfam:PF04879 Molybdop_Fe4S4
InterPro IPR009010 Aspartate decarboxylase-like fold; Gene3D:G3DSA:2.40.40.20 Asp_decarboxylase-like_fold
InterPro IPR009010 Aspartate decarboxylase-like fold; superfamily:SSF50692 Asp_decarb_fold
InterPro NULL NULL; Gene3D:G3DSA:3.40.228.10 G3DSA:3.40.228.10
InterPro NULL NULL; Gene3D:G3DSA:3.90.55.10 G3DSA:3.90.55.10
InterPro NULL NULL; HMMPanther:PTHR11615 PTHR11615
InterPro NULL NULL; HMMPanther:PTHR11615:SF38 PTHR11615:SF38
InterPro NULL NULL; superfamily:SSF53706 SSF53706
Blast Hits [TAIR_pep] AT5G37510.1 | Symbols: EMB1467 | EMB1467 (embryo defective 1467); NADH dehydrogenase (ubiquinone)/ NADH dehydrogenase/ electron carrier/ iron-sulfur cluster binding / oxidoreductase/ oxidoreductase, acting on NADH or NADPH | chr5:14897490-14900352 FORWARD
Blast Hits [nr] ref|ZP_01124928.1| nitrate reductase [Synechococcus sp. WH 7805] gi|88786639|gb|EAR17798.1| nitrate reductase [Synechococcus sp. WH 7805]
Blast Hits [pln_est] dbj|EY775597|EY775597 CR05-C1-103-021-B03-CT.F Mandarin leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus reticulata cDNA, mRNA sequence.
Blast Hits [sprot] NARB_SYNE7 (sp|P39458) Nitrate reductase OS=Synechococcus elongatus (strain PCC 7942) GN=narB PE=1 SV=2
SynWH7803_2482 Gene product hypothetical protein
Function Not in COGs: Not in COGs
InterPro IPR013481 Conserved hypothetical protein CHP02664, nitrate reductase-associated; HMMPfam:PF09655 Nitr_red_assoc
InterPro IPR013481 Conserved hypothetical protein CHP02664, nitrate reductase-associated; HMMTigr:TIGR02664 nitr_red_assoc
Blast Hits [nr] ref|ZP_01124927.1| hypothetical protein WH7805_09714 [Synechococcus sp. WH 7805] gi|88786638|gb|EAR17797.1| hypothetical protein WH7805_09714 [Synechococcus sp. WH 7805]
Blast Hits [pln_est] dbj|DV969866|DV969866 GC07873 Gracilaria changii cDNA library Gracilaria changii cDNA clone HCL_PLATE7_D07_07, mRNA sequence.
Blast Hits [sprot] MICLK_HUMAN (sp|Q6ZW33) MICAL C-terminal-like protein OS=Homo sapiens GN=MICALCL PE=2 SV=3
SynWH7803_2484 Gene product Molybdenum cofactor biosynthesis protein C
Gene symbol moaC
Function Coenzyme transport and metabolism: Coenzyme transport and metabolism
GO term Biological Process: Mo-molybdopterin cofactor biosynthetic process (GO:0006777)
InterPro IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain; Gene3D:G3DSA:3.30.70.640 MoaC_reg
InterPro IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain; HMMPfam:PF01967 MoaC
InterPro IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain; HMMTigr:TIGR00581 moaC
InterPro IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain; superfamily:SSF55040 MoaC
InterPro NULL NULL; HMMPanther:PTHR22960 PTHR22960
Blast Hits [TAIR_pep] AT1G01290.2 | Symbols: CNX3 | CNX3 (COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 3); catalytic | chr1:114299-115296 FORWARD
Blast Hits [nr] ref|ZP_01124923.1| molybdenum cofactor biosynthesis protein C [Synechococcus sp. WH 7805] gi|88786634|gb|EAR17793.1| molybdenum cofactor biosynthesis protein C [Synechococcus sp. WH 7805]
Blast Hits [pln_est] gb|CB065394|CB065394 EST645075 HOGA Medicago truncatula cDNA clone HOGA-2O5, mRNA sequence.
Blast Hits [sprot] MOAC_SYNS9 (sp|Q3AVP2) Molybdenum cofactor biosynthesis protein C OS=Synechococcus sp. (strain CC9902) GN=moaC PE=3 SV=1
SynWH7803_2485 Gene product Molybdopterin biosynthesis protein moeA
Gene symbol moeA
Function Coenzyme transport and metabolism: Coenzyme transport and metabolism
GO term Biological Process: Mo-molybdopterin cofactor biosynthetic process (GO:0006777)
GO term Biological Process: molybdopterin cofactor biosynthetic process (GO:0032324)
InterPro IPR001453 Molybdopterin binding; Gene3D:G3DSA:3.40.980.10 MPT_bd
InterPro IPR001453 Molybdopterin binding; HMMPfam:PF00994 MoCF_biosynth
InterPro IPR001453 Molybdopterin binding; HMMSmart:SM00852 MoCF_biosynth
InterPro IPR001453 Molybdopterin binding; superfamily:SSF53218 MoCF_biosynth
InterPro IPR005110 MoeA, N-terminal and linker domain; HMMPfam:PF03453 MoeA_N
InterPro IPR005110 MoeA, N-terminal and linker domain; superfamily:SSF63882 MoeA_N
InterPro IPR005111 MoeA, C-terminal, domain IV; HMMPfam:PF03454 MoeA_C
InterPro IPR005111 MoeA, C-terminal, domain IV; superfamily:SSF63867 MoeA_C
InterPro IPR020817 Molybdenum cofactor synthesis; HMMTigr:TIGR00177 molyb_syn
InterPro NULL NULL; Gene3D:G3DSA:2.170.190.11 G3DSA:2.170.190.11
InterPro NULL NULL; HMMPanther:PTHR10192 PTHR10192
Blast Hits [TAIR_pep] AT5G20990.1 | Symbols: B73, SIR4, CNX, CHL6, CNX1 | B73; molybdenum ion binding | chr5:7128737-7133397 REVERSE
Blast Hits [nr] ref|ZP_01124922.1| Molybdopterin binding domain protein [Synechococcus sp. WH 7805] gi|88786633|gb|EAR17792.1| Molybdopterin binding domain protein [Synechococcus sp. WH 7805]
Blast Hits [pln_est] gb|FC367680|FC367680 CAYY5437.fwd CAYY Physcomitrella patens subsp. patens Villersexel - regular (H) Physcomitrella patens subsp. patens cDNA clone CAYY5437 5', mRNA sequence.
Blast Hits [sprot] MOEA_ECOLI (sp|P12281) Molybdopterin molybdenumtransferase OS=Escherichia coli (strain K12) GN=moeA PE=1 SV=1
SynWH7803_2486 Gene product Molybdopterin converting factor subunit 2
Gene symbol moaE
Function Coenzyme transport and metabolism: Coenzyme transport and metabolism
GO term Biological Process: Mo-molybdopterin cofactor biosynthetic process (GO:0006777)
InterPro IPR003448 Molybdopterin biosynthesis MoaE; HMMPfam:PF02391 MoaE
InterPro IPR003448 Molybdopterin biosynthesis MoaE; superfamily:SSF54690 Mb_biosynth_MoaE
InterPro NULL NULL; HMMPanther:PTHR23404 PTHR23404
Blast Hits [TAIR_pep] AT2G43760.3 | Symbols: | molybdopterin biosynthesis MoaE family protein | chr2:18133276-18133872 FORWARD
Blast Hits [nr] ref|ZP_01124921.1| molybdenum cofactor biosynthesis protein E [Synechococcus sp. WH 7805] gi|88786632|gb|EAR17791.1| molybdenum cofactor biosynthesis protein E [Synechococcus sp. WH 7805]
Blast Hits [pln_est] gb|CF305921|CF305921 HDA1--02-B24.g1 OsHDAC1-overexpressing transgenic rice lambda phage cDNA library I (HDA1) Oryza sativa Japonica Group cDNA clone HDA1--02-B24, mRNA sequence.
Blast Hits [sprot] MOAE_RALSO (sp|Q8XZR3) Molybdopterin synthase catalytic subunit OS=Ralstonia solanacearum GN=moaE PE=3 SV=1
SynWH7803_2487 Gene product Molybdopterin converting factor subunit 1
Gene symbol moaD
Function Coenzyme transport and metabolism: Coenzyme transport and metabolism
GO term Biological Process: sulfur metabolic process (GO:0006790)
InterPro IPR003749 ThiamineS; HMMPfam:PF02597 ThiS
InterPro IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp; superfamily:SSF54285 Mo_synth/thiamin_syn_S_b-grasp
Blast Hits [TAIR_pep] AT4G10100.3 | Symbols: CNX7, SIR5 | CNX7; catalytic | chr4:6309091-6309381 FORWARD
Blast Hits [nr] ref|ZP_01124920.1| molydbenum cofactor biosynthesis protein D (molybdopterin converting factor small subunit) [Synechococcus sp. WH 7805] gi|88786631|gb|EAR17790.1| molydbenum cofactor biosynthesis protein D (molybdopterin converting factor small subunit) [Synechococcus sp. WH 7805]
Blast Hits [pln_est] gb|BW994172|BW994172 BW994172 Cryptomeria japonica male cone Cryptomeria japonica cDNA clone CM02317 3', mRNA sequence.
Blast Hits [sprot] MOAD_ECOLI (sp|P30748) Molybdopterin synthase sulfur carrier subunit OS=Escherichia coli (strain K12) GN=moaD PE=1 SV=2
SynWH7803_2488 Gene product Molybdenum cofactor biosynthesis protein B
Gene symbol moaB
Function Coenzyme transport and metabolism: Coenzyme transport and metabolism
GO term Biological Process: Mo-molybdopterin cofactor biosynthetic process (GO:0006777)
InterPro IPR001453 Molybdopterin binding; Gene3D:G3DSA:3.40.980.10 MPT_bd
InterPro IPR001453 Molybdopterin binding; HMMPfam:PF00994 MoCF_biosynth
InterPro IPR001453 Molybdopterin binding; HMMSmart:SM00852 MoCF_biosynth
InterPro IPR001453 Molybdopterin binding; superfamily:SSF53218 MoCF_biosynth
InterPro IPR012245 Molybdenum cofactor biosynthesis protein MoaB; HMMPIR:PIRSF006443 MoaB
InterPro IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria; HMMTigr:TIGR02667 moaB_proteo
InterPro IPR020817 Molybdenum cofactor synthesis; HMMTigr:TIGR00177 molyb_syn
InterPro NULL NULL; HMMPanther:PTHR10192 PTHR10192
Blast Hits [TAIR_pep] AT5G20990.1 | Symbols: B73, SIR4, CNX, CHL6, CNX1 | B73; molybdenum ion binding | chr5:7128737-7133397 REVERSE
Blast Hits [nr] ref|ZP_01124919.1| Molybdopterin binding domain protein [Synechococcus sp. WH 7805] gi|88786630|gb|EAR17789.1| Molybdopterin binding domain protein [Synechococcus sp. WH 7805]
Blast Hits [pln_est] gb|BQ153093|BQ153093 NF029E10IR1F1083 Irradiated Medicago truncatula cDNA clone NF029E10IR 5', mRNA sequence.
Blast Hits [sprot] MOAB_ECOLI (sp|P0AEZ9) Molybdenum cofactor biosynthesis protein B OS=Escherichia coli (strain K12) GN=moaB PE=1 SV=2
SynWH7803_2489 Gene product Uroporphyrin-III c-methyltransferase
Gene symbol cobA
Function Coenzyme transport and metabolism: Coenzyme transport and metabolism
GO term Biological Process: metabolic process (GO:0008152)
GO term Biological Process: oxidation reduction (GO:0055114)
GO term Biological Process: porphyrin biosynthetic process (GO:0006779)
GO term Molecular Function: methyltransferase activity (GO:0008168)
InterPro IPR000878 Tetrapyrrole methylase; HMMPfam:PF00590 TP_methylase
InterPro IPR000878 Tetrapyrrole methylase; superfamily:SSF53790 Cor/por_Metransf
InterPro IPR003043 Uroporphiryn-III C-methyltransferase, conserved site; PatternScan:PS00839 SUMT_1
InterPro IPR003043 Uroporphiryn-III C-methyltransferase, conserved site; PatternScan:PS00840 SUMT_2
InterPro IPR006366 Uroporphyrin-III C-methyltransferase, C-terminal; HMMTigr:TIGR01469 cobA_cysG_Cterm
InterPro IPR014776 Tetrapyrrole methylase, subdomain 2; Gene3D:G3DSA:3.30.950.10 4pyrrole_Mease_sub2
InterPro IPR014777 Tetrapyrrole methylase, subdomain 1; Gene3D:G3DSA:3.40.1010.10 4pyrrole_Mease_sub1
InterPro NULL NULL; HMMPanther:PTHR21091 PTHR21091
InterPro NULL NULL; HMMPanther:PTHR21091:SF16 PTHR21091:SF16
Blast Hits [TAIR_pep] AT5G40850.1 | Symbols: UPM1 | UPM1 (UROPHORPHYRIN METHYLASE 1); uroporphyrin-III C-methyltransferase | chr5:16367205-16368724 FORWARD
Blast Hits [nr] ref|ZP_01124918.1| Uroporphyrin-III C-methyltransferase-like protein [Synechococcus sp. WH 7805] gi|88786629|gb|EAR17788.1| Uroporphyrin-III C-methyltransferase-like protein [Synechococcus sp. WH 7805]
Blast Hits [pln_est] gb|CK267636|CK267636 EST713714 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POACB82 5' end, mRNA sequence.
Blast Hits [sprot] SUMT_SYNY3 (sp|Q55749) Uroporphyrinogen-III C-methyltransferase OS=Synechocystis sp. (strain PCC 6803) GN=cobA PE=3 SV=1
SynWH7803_2248 Gene product Two-component system response regulator
Function Signal transduction mechanisms: Signal transduction mechanisms
GO term Biological Process: regulation of transcription, DNA-dependent (GO:0006355)
GO term Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160)
GO term Molecular Function: DNA binding (GO:0003677)
GO term Molecular Function: two-component response regulator activity (GO:0000156)
InterPro IPR001789 Signal transduction response regulator, receiver domain; HMMPfam:PF00072 Response_reg
InterPro IPR001789 Signal transduction response regulator, receiver domain; HMMSmart:SM00448 REC
InterPro IPR001789 Signal transduction response regulator, receiver domain; ProfileScan:PS50110 RESPONSE_REGULATORY
InterPro IPR001867 Signal transduction response regulator, C-terminal; HMMPfam:PF00486 Trans_reg_C
InterPro IPR001867 Signal transduction response regulator, C-terminal; HMMSmart:SM00862 Trans_reg_C
InterPro IPR011006 CheY-like; superfamily:SSF52172 CheY_like
InterPro IPR011991 Winged helix-turn-helix transcription repressor DNA-binding; Gene3D:G3DSA:1.10.10.10 Wing_hlx_DNA_bd
InterPro NULL NULL; Gene3D:G3DSA:3.40.50.2300 G3DSA:3.40.50.2300
InterPro NULL NULL; HMMPanther:PTHR23283 PTHR23283
InterPro NULL NULL; HMMPanther:PTHR23283:SF21 PTHR23283:SF21
Blast Hits [TAIR_pep] AT2G01760.1 | Symbols: ARR14 | ARR14 (ARABIDOPSIS RESPONSE REGULATOR 14); transcription factor/ two-component response regulator | chr2:333041-334514 FORWARD
Blast Hits [nr] ref|ZP_01122610.1| two component transcriptional regulator, winged helix family protein [Synechococcus sp. WH 7805] gi|88788312|gb|EAR19467.1| two component transcriptional regulator, winged helix family protein [Synechococcus sp. WH 7805]
Blast Hits [pln_est] dbj|EY874312|EY874312 CL06-C4-501-013-G09-CT.F Rangpur lime root, plant with hydric stress Citrus limonia cDNA, mRNA sequence.
Blast Hits [sprot] YCF27_PORYE (sp|Q1XDC9) Probable transcriptional regulator ycf27 OS=Porphyra yezoensis GN=ycf27 PE=3 SV=2
SynWH7803_2274 InterPro IPR018922 NAD(P)H-quinone oxidoreductase subunit M; HMMPfam:PF10664 DUF2485
SynWH7803_2483 Gene product hypothetical protein
Function Not in COGs: Not in COGs
Blast Hits [TAIR_pep] AT5G20360.1 | Symbols: | octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein | chr5:6882121-6884630 REVERSE
Blast Hits [nr] ref|ZP_01124924.1| hypothetical protein WH7805_09699 [Synechococcus sp. WH 7805] gi|88786635|gb|EAR17794.1| hypothetical protein WH7805_09699 [Synechococcus sp. WH 7805]
SynWH7803_0001 Blast Hits [nr] ref|ZP_01124871.1| DNA polymerase III subunit beta [Synechococcus sp. WH 7805] gi|88786582|gb|EAR17741.1| DNA polymerase III subunit beta [Synechococcus sp. WH 7805]
SynWH7803_0002 Blast Hits [nr] ref|ZP_01124870.1| hypothetical protein WH7805_09429 [Synechococcus sp. WH 7805] gi|88786581|gb|EAR17740.1| hypothetical protein WH7805_09429 [Synechococcus sp. WH 7805]
SynWH7803_0003 Blast Hits [nr] ref|ZP_01124869.1| phosphoribosylformylglycinamidine synthase subunit II [Synechococcus sp. WH 7805] gi|88786580|gb|EAR17739.1| phosphoribosylformylglycinamidine synthase subunit II [Synechococcus sp. WH 7805]
SynWH7803_0004 Blast Hits [nr] ref|ZP_01124868.1| amidophosphoribosyltransferase [Synechococcus sp. WH 7805] gi|88786579|gb|EAR17738.1| amidophosphoribosyltransferase [Synechococcus sp. WH 7805]
SynWH7803_0005 Blast Hits [nr] ref|ZP_01124867.1| DNA gyrase/topoisomerase IV, subunit A [Synechococcus sp. WH 7805] gi|88786578|gb|EAR17737.1| DNA gyrase/topoisomerase IV, subunit A [Synechococcus sp. WH 7805]
SynWH7803_0006 Blast Hits [nr] ref|ZP_01124866.1| hypothetical protein WH7805_09409 [Synechococcus sp. WH 7805] gi|88786577|gb|EAR17736.1| hypothetical protein WH7805_09409 [Synechococcus sp. WH 7805]
SynWH7803_0007 Blast Hits [nr] ref|ZP_01124865.1| 4Fe-4S cluster binding protein [Synechococcus sp. WH 7805] gi|88786576|gb|EAR17735.1| 4Fe-4S cluster binding protein [Synechococcus sp. WH 7805]
SynWH7803_0008 Blast Hits [nr] ref|ZP_01124864.1| hypothetical protein WH7805_09399 [Synechococcus sp. WH 7805] gi|88786575|gb|EAR17734.1| hypothetical protein WH7805_09399 [Synechococcus sp. WH 7805]
SynWH7803_0009 Blast Hits [nr] ref|ZP_01124863.1| hypothetical protein WH7805_09394 [Synechococcus sp. WH 7805] gi|88786574|gb|EAR17733.1| hypothetical protein WH7805_09394 [Synechococcus sp. WH 7805]
SynWH7803_0010 Blast Hits [nr] ref|ZP_01124862.1| transcription antitermination protein NusB [Synechococcus sp. WH 7805] gi|88786573|gb|EAR17732.1| transcription antitermination protein NusB [Synechococcus sp. WH 7805]
SynWH7803_0011 Blast Hits [TAIR_pep] AT2G45770.1 | Symbols: CPFTSY, FRD4 | CPFTSY; 7S RNA binding / GTP binding / nucleoside-triphosphatase/ nucleotide binding | chr2:18851248-18853402 FORWARD
Blast Hits [nr] ref|ZP_01124861.1| signal recognition particle docking protein FtsY [Synechococcus sp. WH 7805] gi|88786572|gb|EAR17731.1| signal recognition particle docking protein FtsY [Synechococcus sp. WH 7805]
SynWH7803_0012 Blast Hits [nr] ref|ZP_01124860.1| hypothetical protein WH7805_09379 [Synechococcus sp. WH 7805] gi|88786571|gb|EAR17730.1| hypothetical protein WH7805_09379 [Synechococcus sp. WH 7805]
SynWH7803_0013 Blast Hits [nr] ref|ZP_01124859.1| argininosuccinate lyase [Synechococcus sp. WH 7805] gi|88786570|gb|EAR17729.1| argininosuccinate lyase [Synechococcus sp. WH 7805]
SynWH7803_0015 Blast Hits [nr] ref|ZP_01124857.1| hypothetical protein WH7805_09364 [Synechococcus sp. WH 7805] gi|88786568|gb|EAR17727.1| hypothetical protein WH7805_09364 [Synechococcus sp. WH 7805]
SynWH7803_0016 Blast Hits [nr] ref|ZP_01124856.1| Methionine sulfoxide reductase B [Synechococcus sp. WH 7805] gi|88786567|gb|EAR17726.1| Methionine sulfoxide reductase B [Synechococcus sp. WH 7805]
SynWH7803_0017 Blast Hits [nr] ref|ZP_01124855.1| HI0933-like protein [Synechococcus sp. WH 7805] gi|88786566|gb|EAR17725.1| HI0933-like protein [Synechococcus sp. WH 7805]
SynWH7803_0019 Blast Hits [nr] ref|ZP_01124854.1| pili biogenesis protein [Synechococcus sp. WH 7805] gi|88786565|gb|EAR17724.1| pili biogenesis protein [Synechococcus sp. WH 7805]
SynWH7803_0020 Blast Hits [nr] ref|ZP_01124853.1| hypothetical protein WH7805_09344 [Synechococcus sp. WH 7805] gi|88786564|gb|EAR17723.1| hypothetical protein WH7805_09344 [Synechococcus sp. WH 7805]
SynWH7803_0021 Blast Hits [nr] ref|ZP_01124852.1| General secretion pathway protein E [Synechococcus sp. WH 7805] gi|88786563|gb|EAR17722.1| General secretion pathway protein E [Synechococcus sp. WH 7805]
SynWH7803_0022 Blast Hits [nr] ref|ZP_01124851.1| Heat shock protein GrpE [Synechococcus sp. WH 7805] gi|88786562|gb|EAR17721.1| Heat shock protein GrpE [Synechococcus sp. WH 7805]
SynWH7803_0023 Blast Hits [nr] ref|ZP_01124850.1| DnaJ protein [Synechococcus sp. WH 7805] gi|88786561|gb|EAR17720.1| DnaJ protein [Synechococcus sp. WH 7805]
SynWH7803_0024 Blast Hits [nr] ref|ZP_01124849.1| hypothetical protein WH7805_09324 [Synechococcus sp. WH 7805] gi|88786560|gb|EAR17719.1| hypothetical protein WH7805_09324 [Synechococcus sp. WH 7805]
SynWH7803_0025 Blast Hits [nr] ref|ZP_01124848.1| hypothetical protein WH7805_09319 [Synechococcus sp. WH 7805] gi|88786559|gb|EAR17718.1| hypothetical protein WH7805_09319 [Synechococcus sp. WH 7805]
SynWH7803_0026 Blast Hits [nr] ref|ZP_01124847.1| hypothetical protein WH7805_09314 [Synechococcus sp. WH 7805] gi|88786558|gb|EAR17717.1| hypothetical protein WH7805_09314 [Synechococcus sp. WH 7805]
SynWH7803_0027 Blast Hits [nr] ref|ZP_01124846.1| UDP-N-acetylenolpyruvoylglucosamine reductase [Synechococcus sp. WH 7805] gi|88786557|gb|EAR17716.1| UDP-N-acetylenolpyruvoylglucosamine reductase [Synechococcus sp. WH 7805]
SynWH7803_0028 Blast Hits [nr] ref|ZP_01124845.1| UDP-N-acetylmuramate--alanine ligase [Synechococcus sp. WH 7805] gi|88786556|gb|EAR17715.1| UDP-N-acetylmuramate--alanine ligase [Synechococcus sp. WH 7805]
SynWH7803_0029 Blast Hits [nr] ref|ZP_01124844.1| glyceraldehyde 3-phosphate dehydrogenase (NADP+) [Synechococcus sp. WH 7805] gi|88786555|gb|EAR17714.1| glyceraldehyde 3-phosphate dehydrogenase (NADP+) [Synechococcus sp. WH 7805]
SynWH7803_0030 Blast Hits [nr] ref|ZP_01124843.1| putative thiamine monophosphate kinase [Synechococcus sp. WH 7805] gi|88786554|gb|EAR17713.1| putative thiamine monophosphate kinase [Synechococcus sp. WH 7805]
SynWH7803_0031 Blast Hits [nr] ref|ZP_01124842.1| putative cyclophilin-type peptidyl-prolyl cis-trans isomerase [Synechococcus sp. WH 7805] gi|88786553|gb|EAR17712.1| putative cyclophilin-type peptidyl-prolyl cis-trans isomerase [Synechococcus sp. WH 7805]
SynWH7803_0033 Blast Hits [nr] ref|ZP_01124840.1| acetyl-CoA carboxylase, biotin carboxyl carrier protein [Synechococcus sp. WH 7805] gi|88786551|gb|EAR17710.1| acetyl-CoA carboxylase, biotin carboxyl carrier protein [Synechococcus sp. WH 7805]
SynWH7803_0034 Blast Hits [nr] ref|ZP_01124839.1| 4-hydroxythreonine-4-phosphate dehydrogenase [Synechococcus sp. WH 7805] gi|88786550|gb|EAR17709.1| 4-hydroxythreonine-4-phosphate dehydrogenase [Synechococcus sp. WH 7805]
SynWH7803_0035 Blast Hits [nr] ref|ZP_01124838.1| 4-hydroxythreonine-4-phosphate dehydrogenase [Synechococcus sp. WH 7805] gi|88786549|gb|EAR17708.1| 4-hydroxythreonine-4-phosphate dehydrogenase [Synechococcus sp. WH 7805]
SynWH7803_0036 Blast Hits [nr] ref|ZP_01124837.1| hypothetical protein WH7805_09264 [Synechococcus sp. WH 7805] gi|88786548|gb|EAR17707.1| hypothetical protein WH7805_09264 [Synechococcus sp. WH 7805]
SynWH7803_0039 Blast Hits [nr] ref|ZP_01124833.1| possible helicase [Synechococcus sp. WH 7805] gi|88786544|gb|EAR17703.1| possible helicase [Synechococcus sp. WH 7805]
SynWH7803_0040 Blast Hits [nr] ref|ZP_01124832.1| hypothetical protein WH7805_09239 [Synechococcus sp. WH 7805] gi|88786543|gb|EAR17702.1| hypothetical protein WH7805_09239 [Synechococcus sp. WH 7805]
SynWH7803_0041 Blast Hits [nr] ref|ZP_01124831.1| hypothetical protein WH7805_09234 [Synechococcus sp. WH 7805] gi|88786542|gb|EAR17701.1| hypothetical protein WH7805_09234 [Synechococcus sp. WH 7805]
SynWH7803_0043 Blast Hits [nr] ref|ZP_01124829.1| hypothetical protein WH7805_09224 [Synechococcus sp. WH 7805] gi|88786540|gb|EAR17699.1| hypothetical protein WH7805_09224 [Synechococcus sp. WH 7805]
SynWH7803_0044 Blast Hits [nr] ref|ZP_01124828.1| hypothetical protein WH7805_09219 [Synechococcus sp. WH 7805] gi|88786539|gb|EAR17698.1| hypothetical protein WH7805_09219 [Synechococcus sp. WH 7805]
SynWH7803_0045 Blast Hits [nr] ref|ZP_01124827.1| hypothetical protein WH7805_09214 [Synechococcus sp. WH 7805] gi|88786538|gb|EAR17697.1| hypothetical protein WH7805_09214 [Synechococcus sp. WH 7805]
SynWH7803_0046 Blast Hits [nr] ref|ZP_01124826.1| soluble hydrogenase small subunit [Synechococcus sp. WH 7805] gi|88786537|gb|EAR17696.1| soluble hydrogenase small subunit [Synechococcus sp. WH 7805]
SynWH7803_0047 Blast Hits [nr] ref|ZP_01124825.1| cobalt-precorrin-6A synthase [Synechococcus sp. WH 7805] gi|88786536|gb|EAR17695.1| cobalt-precorrin-6A synthase [Synechococcus sp. WH 7805]
SynWH7803_0048 Blast Hits [nr] ref|ZP_01124824.1| bifunctional GMP synthase/glutamine amidotransferase protein [Synechococcus sp. WH 7805] gi|88786535|gb|EAR17694.1| bifunctional GMP synthase/glutamine amidotransferase protein [Synechococcus sp. WH 7805]
SynWH7803_0049 Blast Hits [nr] ref|ZP_01124822.1| hypothetical protein WH7805_09189 [Synechococcus sp. WH 7805] gi|88786533|gb|EAR17692.1| hypothetical protein WH7805_09189 [Synechococcus sp. WH 7805]
SynWH7803_0050 Blast Hits [nr] ref|ZP_01124821.1| hypothetical protein WH7805_09184 [Synechococcus sp. WH 7805] gi|88786532|gb|EAR17691.1| hypothetical protein WH7805_09184 [Synechococcus sp. WH 7805]
SynWH7803_0051 Blast Hits [TAIR_pep] AT1G28060.1 | Symbols: | small nuclear ribonucleoprotein family protein / snRNP family protein | chr1:9779167-9782486 FORWARD
Blast Hits [nr] ref|ZP_01124820.1| Putative penicillin-binding protein [Synechococcus sp. WH 7805] gi|88786531|gb|EAR17690.1| Putative penicillin-binding protein [Synechococcus sp. WH 7805]
SynWH7803_0052 Blast Hits [nr] ref|ZP_01124819.1| SqdX [Synechococcus sp. WH 7805] gi|88786530|gb|EAR17689.1| SqdX [Synechococcus sp. WH 7805]
SynWH7803_0054 Blast Hits [nr] ref|ZP_01124817.1| hypothetical protein WH7805_09164 [Synechococcus sp. WH 7805] gi|88786528|gb|EAR17687.1| hypothetical protein WH7805_09164 [Synechococcus sp. WH 7805]
SynWH7803_0055 Blast Hits [nr] ref|ZP_01124816.1| thiazole synthase [Synechococcus sp. WH 7805] gi|88786527|gb|EAR17686.1| thiazole synthase [Synechococcus sp. WH 7805]
SynWH7803_0056 Blast Hits [nr] ref|ZP_01124815.1| hypothetical protein WH7805_09154 [Synechococcus sp. WH 7805] gi|88786526|gb|EAR17685.1| hypothetical protein WH7805_09154 [Synechococcus sp. WH 7805]
SynWH7803_0057 Blast Hits [nr] ref|ZP_01124814.1| hypothetical protein WH7805_09149 [Synechococcus sp. WH 7805] gi|88786525|gb|EAR17684.1| hypothetical protein WH7805_09149 [Synechococcus sp. WH 7805]
SynWH7803_0058 Blast Hits [nr] ref|ZP_01124813.1| 50S ribosomal protein L20 [Synechococcus sp. WH 7805] gi|88786524|gb|EAR17683.1| 50S ribosomal protein L20 [Synechococcus sp. WH 7805]
SynWH7803_0059 Blast Hits [nr] ref|ZP_01124812.1| 50S ribosomal protein L35 [Synechococcus sp. WH 7805] gi|88786523|gb|EAR17682.1| 50S ribosomal protein L35 [Synechococcus sp. WH 7805]
SynWH7803_0060 Blast Hits [nr] ref|ZP_01124811.1| possible amidase enhancer [Synechococcus sp. WH 7805] gi|88786522|gb|EAR17681.1| possible amidase enhancer [Synechococcus sp. WH 7805]
SynWH7803_0061 Blast Hits [nr] ref|ZP_01124810.1| Glycosyl transferase, family 2 [Synechococcus sp. WH 7805] gi|88786521|gb|EAR17680.1| Glycosyl transferase, family 2 [Synechococcus sp. WH 7805]
SynWH7803_0062 Blast Hits [nr] ref|ZP_01124809.1| DNA polymerase, gamma and tau subunits [Synechococcus sp. WH 7805] gi|88786520|gb|EAR17679.1| DNA polymerase, gamma and tau subunits [Synechococcus sp. WH 7805]
SynWH7803_0063 Blast Hits [nr] ref|ZP_01124808.1| hypothetical protein WH7805_09119 [Synechococcus sp. WH 7805] gi|88786519|gb|EAR17678.1| hypothetical protein WH7805_09119 [Synechococcus sp. WH 7805]
SynWH7803_0089 Blast Hits [nr] ref|YP_002485842.1| Capsular polysaccharide biosynthesis protein-like protein [Cyanothece sp. PCC 7425] gi|219867142|gb|ACL47481.1| Capsular polysaccharide biosynthesis protein-like protein [Cyanothece sp. PCC 7425]
SynWH7803_0182 Blast Hits [nr] ref|ZP_01123720.1| hypothetical protein WH7805_08601 [Synechococcus sp. WH 7805] gi|88788248|gb|EAR19404.1| hypothetical protein WH7805_08601 [Synechococcus sp. WH 7805]
SynWH7803_0274 Blast Hits [nr] ref|ZP_01123564.1| putative sarcosine oxidase [Synechococcus sp. WH 7805] gi|88788092|gb|EAR19248.1| putative sarcosine oxidase [Synechococcus sp. WH 7805]
SynWH7803_0414 Blast Hits [nr] ref|NP_898178.1| 50S ribosomal protein L36 [Synechococcus sp. WH 8102] gi|78185542|ref|YP_377976.1| 50S ribosomal protein L36 [Synechococcus sp. CC9902] gi|87300893|ref|ZP_01083735.1| Ribosomal protein L36 [Synechococcus sp. WH 5701] gi|116072180|ref|ZP_01469448.1| Ribosomal protein L36 [Synechococcus sp. BL107] gi|254430396|ref|ZP_05044099.1| ribosomal protein L36 [Cyanobium sp. PCC 7001] gi|59798842|sp|Q7U4I0.1|RL36_SYNPX RecName: Full=50S ribosomal protein L36 gi|123581061|sp|Q3AW73.1|RL36_SYNS9 RecName: Full=50S ribosomal protein L36 gi|33633397|emb|CAE08602.1| 50S ribosomal protein L36 [Synechococcus sp. WH 8102] gi|78169836|gb|ABB26933.1| LSU ribosomal protein L36P [Synechococcus sp. CC9902] gi|87284764|gb|EAQ76716.1| Ribosomal protein L36 [Synechococcus sp. WH 5701] gi|116065803|gb|EAU71561.1| Ribosomal protein L36 [Synechococcus sp. BL107] gi|197624849|gb|EDY37408.1| ribosomal protein L36 [Cyanobium sp. PCC 7001]
SynWH7803_0548 Blast Hits [nr] ref|ZP_01124805.1| Glycoside hydrolase family protein [Synechococcus sp. WH 7805] gi|88787238|gb|EAR18396.1| Glycoside hydrolase family protein [Synechococcus sp. WH 7805]
SynWH7803_0549 Blast Hits [nr] ref|ZP_01124804.1| 3-dehydroquinate dehydratase [Synechococcus sp. WH 7805] gi|88787237|gb|EAR18395.1| 3-dehydroquinate dehydratase [Synechococcus sp. WH 7805]
SynWH7803_0550 Blast Hits [nr] ref|ZP_01124803.1| tRNA-(MS(2)IO(6)A)-hydroxylase-like protein [Synechococcus sp. WH 7805] gi|88787236|gb|EAR18394.1| tRNA-(MS(2)IO(6)A)-hydroxylase-like protein [Synechococcus sp. WH 7805]
SynWH7803_0551 Blast Hits [nr] ref|ZP_01124801.1| hypothetical protein WH7805_06351 [Synechococcus sp. WH 7805] gi|88787234|gb|EAR18392.1| hypothetical protein WH7805_06351 [Synechococcus sp. WH 7805]
SynWH7803_0557 Blast Hits [nr] ref|YP_002483735.1| ABC transporter related [Cyanothece sp. PCC 7425] gi|219865035|gb|ACL45374.1| ABC transporter related [Cyanothece sp. PCC 7425]
SynWH7803_0560 Blast Hits [nr] ref|ZP_01124800.1| hypothetical protein WH7805_06346 [Synechococcus sp. WH 7805] gi|88787233|gb|EAR18391.1| hypothetical protein WH7805_06346 [Synechococcus sp. WH 7805]
SynWH7803_0592 Blast Hits [nr] ref|ZP_01472311.1| hypothetical protein RS9916_25864 [Synechococcus sp. RS9916] gi|116067248|gb|EAU73002.1| hypothetical protein RS9916_25864 [Synechococcus sp. RS9916]
SynWH7803_0687 Blast Hits [nr] ref|ZP_01123248.1| CO2 hydration protein [Synechococcus sp. WH 7805] gi|88788950|gb|EAR20105.1| CO2 hydration protein [Synechococcus sp. WH 7805]
SynWH7803_0879 Blast Hits [nr] ref|YP_001055201.1| DNA repair helicase RAD25 [Pyrobaculum calidifontis JCM 11548] gi|126248644|gb|ABO07735.1| DNA repair helicase RAD25 [Pyrobaculum calidifontis JCM 11548]
SynWH7803_1051 Blast Hits [nr] ref|YP_001226132.1| permease [Synechococcus sp. WH 7803] gi|147849284|emb|CAK24835.1| Predicted permease [Synechococcus sp. WH 7803]
SynWH7803_1084 Blast Hits [nr] ref|NP_251177.1| hypothetical protein PA2487 [Pseudomonas aeruginosa PAO1] gi|107101931|ref|ZP_01365849.1| hypothetical protein PaerPA_01002978 [Pseudomonas aeruginosa PACS2] gi|218891533|ref|YP_002440400.1| hypothetical protein PLES_28091 [Pseudomonas aeruginosa LESB58] gi|254235486|ref|ZP_04928809.1| hypothetical protein PACG_01403 [Pseudomonas aeruginosa C3719] gi|254240919|ref|ZP_04934241.1| hypothetical protein PA2G_01597 [Pseudomonas aeruginosa 2192] gi|296389094|ref|ZP_06878569.1| hypothetical protein PaerPAb_13131 [Pseudomonas aeruginosa PAb1] gi|9948539|gb|AAG05875.1|AE004676_7 hypothetical protein PA2487 [Pseudomonas aeruginosa PAO1] gi|126167417|gb|EAZ52928.1| hypothetical protein PACG_01403 [Pseudomonas aeruginosa C3719] gi|126194297|gb|EAZ58360.1| hypothetical protein PA2G_01597 [Pseudomonas aeruginosa 2192] gi|218771759|emb|CAW27536.1| hypothetical protein [Pseudomonas aeruginosa LESB58]
SynWH7803_1230 Blast Hits [nr] ref|ZP_01080278.1| hypothetical protein RS9917_12485 [Synechococcus sp. RS9917] gi|86168001|gb|EAQ69259.1| hypothetical protein RS9917_12485 [Synechococcus sp. RS9917]
SynWH7803_1295 Blast Hits [nr] ref|ZP_01124031.1| hypothetical protein WH7805_02487 [Synechococcus sp. WH 7805] gi|88787509|gb|EAR18666.1| hypothetical protein WH7805_02487 [Synechococcus sp. WH 7805]
SynWH7803_1678 Blast Hits [nr] ref|ZP_01124897.1| hypothetical protein WH7805_09564 [Synechococcus sp. WH 7805] gi|88786608|gb|EAR17767.1| hypothetical protein WH7805_09564 [Synechococcus sp. WH 7805]
SynWH7803_2030 Blast Hits [nr] ref|ZP_01468588.1| putative c-type cytochrome biogenesis protein CcdA [Synechococcus sp. BL107] gi|116066724|gb|EAU72481.1| putative c-type cytochrome biogenesis protein CcdA [Synechococcus sp. BL107]
SynWH7803_2107 Blast Hits [nr] ref|YP_002482324.1| Cupin 2 conserved barrel domain protein [Cyanothece sp. PCC 7425] gi|219863624|gb|ACL43963.1| Cupin 2 conserved barrel domain protein [Cyanothece sp. PCC 7425]
SynWH7803_2113 Blast Hits [nr] ref|YP_001224814.1| hypothetical protein SynWH7803_1091 [Synechococcus sp. WH 7803] gi|147847966|emb|CAK23517.1| Hypothetical protein [Synechococcus sp. WH 7803]
SynWH7803_2270 Blast Hits [nr] ref|YP_002481497.1| response regulator receiver protein [Cyanothece sp. PCC 7425] gi|219862797|gb|ACL43136.1| response regulator receiver protein [Cyanothece sp. PCC 7425]
SynWH7803_2271 Blast Hits [nr] ref|YP_002481496.1| response regulator receiver protein [Cyanothece sp. PCC 7425] gi|219862796|gb|ACL43135.1| response regulator receiver protein [Cyanothece sp. PCC 7425]
SynWH7803_2272 Blast Hits [nr] ref|YP_002484234.1| Cache sensor hybrid histidine kinase [Cyanothece sp. PCC 7425] gi|219865534|gb|ACL45873.1| Cache sensor hybrid histidine kinase [Cyanothece sp. PCC 7425]
SynWH7803_2279 Blast Hits [nr] ref|ZP_01472482.1| hypothetical protein RS9916_26719 [Synechococcus sp. RS9916] gi|116067419|gb|EAU73173.1| hypothetical protein RS9916_26719 [Synechococcus sp. RS9916]
SynWH7803_2326 Blast Hits [nr] ref|ZP_01125370.1| hypothetical protein WH7805_10823 [Synechococcus sp. WH 7805] gi|88786248|gb|EAR17409.1| hypothetical protein WH7805_10823 [Synechococcus sp. WH 7805]
SynWH7803_2506 Blast Hits [nr] ref|ZP_01124899.1| putative chloride channel [Synechococcus sp. WH 7805] gi|88786610|gb|EAR17769.1| putative chloride channel [Synechococcus sp. WH 7805]
SynWH7803_2507 Blast Hits [nr] ref|ZP_01124898.1| hypothetical protein WH7805_09569 [Synechococcus sp. WH 7805] gi|88786609|gb|EAR17768.1| hypothetical protein WH7805_09569 [Synechococcus sp. WH 7805]
SynWH7803_2508 Blast Hits [nr] ref|ZP_01124896.1| hypothetical protein WH7805_09559 [Synechococcus sp. WH 7805] gi|88786607|gb|EAR17766.1| hypothetical protein WH7805_09559 [Synechococcus sp. WH 7805]
SynWH7803_2509 Blast Hits [nr] ref|ZP_01124895.1| formyltetrahydrofolate deformylase [Synechococcus sp. WH 7805] gi|88786606|gb|EAR17765.1| formyltetrahydrofolate deformylase [Synechococcus sp. WH 7805]
SynWH7803_2511 Blast Hits [nr] ref|ZP_01124893.1| hypothetical protein WH7805_09544 [Synechococcus sp. WH 7805] gi|88786604|gb|EAR17763.1| hypothetical protein WH7805_09544 [Synechococcus sp. WH 7805]
SynWH7803_2512 Blast Hits [nr] ref|ZP_01124892.1| NAD binding site:D-amino acid oxidase [Synechococcus sp. WH 7805] gi|88786603|gb|EAR17762.1| NAD binding site:D-amino acid oxidase [Synechococcus sp. WH 7805]
SynWH7803_2513 Blast Hits [nr] ref|ZP_01124891.1| ABC transporter, substrate binding protein, phosphate [Synechococcus sp. WH 7805] gi|88786602|gb|EAR17761.1| ABC transporter, substrate binding protein, phosphate [Synechococcus sp. WH 7805]
SynWH7803_2514 Blast Hits [nr] ref|ZP_01124890.1| molecular chaperone DnaK [Synechococcus sp. WH 7805] gi|88786601|gb|EAR17760.1| molecular chaperone DnaK [Synechococcus sp. WH 7805]
SynWH7803_2515 Blast Hits [nr] ref|ZP_01124889.1| shikimate / quinate 5-dehydrogenase [Synechococcus sp. WH 7805] gi|88786600|gb|EAR17759.1| shikimate / quinate 5-dehydrogenase [Synechococcus sp. WH 7805]
SynWH7803_2516 Blast Hits [nr] ref|ZP_01124888.1| hypothetical protein WH7805_09519 [Synechococcus sp. WH 7805] gi|88786599|gb|EAR17758.1| hypothetical protein WH7805_09519 [Synechococcus sp. WH 7805]
SynWH7803_2517 Blast Hits [nr] ref|ZP_01124887.1| 30S ribosomal protein S6 [Synechococcus sp. WH 7805] gi|88786598|gb|EAR17757.1| 30S ribosomal protein S6 [Synechococcus sp. WH 7805]
SynWH7803_2518 Blast Hits [nr] ref|ZP_01124886.1| hypothetical protein WH7805_09509 [Synechococcus sp. WH 7805] gi|88786597|gb|EAR17756.1| hypothetical protein WH7805_09509 [Synechococcus sp. WH 7805]
SynWH7803_2519 Blast Hits [TAIR_pep] AT4G24830.1 | Symbols: | arginosuccinate synthase family | chr4:12793085-12795857 REVERSE
Blast Hits [nr] ref|ZP_01124885.1| Argininosuccinate synthase [Synechococcus sp. WH 7805] gi|88786596|gb|EAR17755.1| Argininosuccinate synthase [Synechococcus sp. WH 7805]
SynWH7803_2520 Blast Hits [nr] ref|ZP_01124884.1| hypothetical protein WH7805_09499 [Synechococcus sp. WH 7805] gi|88786595|gb|EAR17754.1| hypothetical protein WH7805_09499 [Synechococcus sp. WH 7805]
SynWH7803_2521 Blast Hits [nr] ref|ZP_01124883.1| hypothetical protein WH7805_09494 [Synechococcus sp. WH 7805] gi|88786594|gb|EAR17753.1| hypothetical protein WH7805_09494 [Synechococcus sp. WH 7805]
SynWH7803_2522 Blast Hits [nr] ref|ZP_01124882.1| Putative phospho-N-acetylmuramoyl-pentapeptide-transferase [Synechococcus sp. WH 7805] gi|88786593|gb|EAR17752.1| Putative phospho-N-acetylmuramoyl-pentapeptide-transferase [Synechococcus sp. WH 7805]
SynWH7803_2523 Blast Hits [nr] ref|ZP_01124881.1| hypothetical protein WH7805_09484 [Synechococcus sp. WH 7805] gi|88786592|gb|EAR17751.1| hypothetical protein WH7805_09484 [Synechococcus sp. WH 7805]
SynWH7803_2525 Blast Hits [nr] ref|ZP_01124880.1| hypothetical protein WH7805_09479 [Synechococcus sp. WH 7805] gi|88786591|gb|EAR17750.1| hypothetical protein WH7805_09479 [Synechococcus sp. WH 7805]
SynWH7803_2526 Blast Hits [nr] ref|ZP_01124879.1| 5'-phosphoribosylglycinamide transformylase [Synechococcus sp. WH 7805] gi|88786590|gb|EAR17749.1| 5'-phosphoribosylglycinamide transformylase [Synechococcus sp. WH 7805]
SynWH7803_2527 Blast Hits [nr] ref|ZP_01124878.1| Sucrose phosphate synthase [Synechococcus sp. WH 7805] gi|88786589|gb|EAR17748.1| Sucrose phosphate synthase [Synechococcus sp. WH 7805]
SynWH7803_2528 Blast Hits [nr] ref|ZP_01124877.1| hypothetical protein WH7805_09464 [Synechococcus sp. WH 7805] gi|88786588|gb|EAR17747.1| hypothetical protein WH7805_09464 [Synechococcus sp. WH 7805]
SynWH7803_2529 Blast Hits [nr] ref|ZP_01124876.1| excinuclease ABC subunit A [Synechococcus sp. WH 7805] gi|88786587|gb|EAR17746.1| excinuclease ABC subunit A [Synechococcus sp. WH 7805]
SynWH7803_2530 Blast Hits [nr] ref|ZP_01124875.1| DNA repair protein RecN [Synechococcus sp. WH 7805] gi|88786586|gb|EAR17745.1| DNA repair protein RecN [Synechococcus sp. WH 7805]
SynWH7803_2531 Blast Hits [nr] ref|ZP_01124874.1| possible protein kinase: ABC1 family protein [Synechococcus sp. WH 7805] gi|88786585|gb|EAR17744.1| possible protein kinase: ABC1 family protein [Synechococcus sp. WH 7805]
SynWH7803_2532 Blast Hits [nr] ref|ZP_01124873.1| hypothetical protein WH7805_09444 [Synechococcus sp. WH 7805] gi|88786584|gb|EAR17743.1| hypothetical protein WH7805_09444 [Synechococcus sp. WH 7805]
SynWH7803_2533 Blast Hits [nr] ref|ZP_01124872.1| threonine synthase [Synechococcus sp. WH 7805] gi|88786583|gb|EAR17742.1| threonine synthase [Synechococcus sp. WH 7805]
SynWH7803_0291 Blast Hits [sprot] RUVX_GEOTN (sp|A4IR78) Putative Holliday junction resolvase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=GTNG_2487 PE=3 SV=1
SynWH7803_0739 Blast Hits [sprot] CD248_MOUSE (sp|Q91V98) Endosialin OS=Mus musculus GN=Cd248 PE=2 SV=1
SynWH7803_1436 Blast Hits [sprot] DHPS_SYNY3 (sp|P73248) Dihydropteroate synthase OS=Synechocystis sp. (strain PCC 6803) GN=folP PE=3 SV=1
SynWH7803_1643 Blast Hits [sprot] MHPC_BURVG (sp|A4JPX5) 2-hydroxy-6-oxononadienedioate/2-hydroxy-6- oxononatrienedioate hydrolase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=mhpC PE=3 SV=1
SynWH7803_1979 Blast Hits [sprot] FER_MASLA (sp|P00248) Ferredoxin OS=Mastigocladus laminosus GN=petF PE=1 SV=2
SynWH7803_0259 Blast Hits [pln_est] dbj|EV119532|EV119532 0124844 Brassica napus Root library Brassica napus cDNA, mRNA sequence.
SynWH7803_0366 Blast Hits [pln_est] gb|GR302482|GR302482 WRIC_98 cDNA library of a compatible interaction between stripe rust (Puccinia striiformis) and wheat Triticum aestivum cDNA 5' similar to photosystem II thylakoid membrane protein, mRNA sequence.
SynWH7803_0784 Blast Hits [pln_est] gb|GR302482|GR302482 WRIC_98 cDNA library of a compatible interaction between stripe rust (Puccinia striiformis) and wheat Triticum aestivum cDNA 5' similar to photosystem II thylakoid membrane protein, mRNA sequence.
SynWH7803_0790 Blast Hits [pln_est] gb|GR302482|GR302482 WRIC_98 cDNA library of a compatible interaction between stripe rust (Puccinia striiformis) and wheat Triticum aestivum cDNA 5' similar to photosystem II thylakoid membrane protein, mRNA sequence.
SynWH7803_0813 Blast Hits [pln_est] gb|BE024811|BE024811 894006C06.y1 C. reinhardtii CC-1690, normalized, Lambda Zap II Chlamydomonas reinhardtii cDNA, mRNA sequence.
SynWH7803_1064 Blast Hits [pln_est] gb|GO615851|GO615851 djr248-T3 Potato dormant meristem library Solanum tuberosum cDNA, mRNA sequence.
SynWH7803_1254 Blast Hits [pln_est] gb|CK248280|CK248280 EST731917 potato callus cDNA library, normalized and full-length Solanum tuberosum cDNA clone POCAZ75 5' end, mRNA sequence.
SynWH7803_2036 Blast Hits [pln_est] dbj|EH042485|EH042485 AS1RN23P1D07.ab1 Healthy Roots (RN) Arachis stenosperma cDNA 5', mRNA sequence.
SynWH7803_2050 Blast Hits [pln_est] gb|FC443756|FC443756 CBAX2489.fwd CBAX Physcomitrella patens subsp. patens Gransden - dessicated (L) Physcomitrella patens subsp. patens cDNA clone CBAX2489 5', mRNA sequence.
SynWH7803_2084 Blast Hits [pln_est] gb|GR302482|GR302482 WRIC_98 cDNA library of a compatible interaction between stripe rust (Puccinia striiformis) and wheat Triticum aestivum cDNA 5' similar to photosystem II thylakoid membrane protein, mRNA sequence.
SynWH7803_2408 Blast Hits [pln_est] gb|GE248669|GE248669 CBWC1463.b1 CBWC Chlorella sp. NC64A EST library (H) Chlorella sp. NC64A cDNA clone CBWC1463 5', mRNA sequence.
SynWH7803_0160 Blast Hits [TAIR_pep] AT2G23093.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF791 (InterPro:IPR008509), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49310.1); Has 251 Blast hits to 248 proteins in 89 species: Archae - 0; Bacteria - 66; Metazoa - 68; Fungi - 18; Plants - 79; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). | chr2:9832193-9834416 FORWARD
SynWH7803_0237 Blast Hits [TAIR_pep] AT5G21930.2 | Symbols: PAA2, HMA8 | PAA2 (P-TYPE ATPASE OF ARABIDOPSIS 2); ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism / copper ion transmembrane transporter | chr5:7243129-7248721 FORWARD
SynWH7803_0267 Blast Hits [TAIR_pep] AT5G24850.1 | Symbols: CRY3 | CRY3 (cryptochrome 3); DNA binding / DNA photolyase/ FMN binding | chr5:8535399-8538016 REVERSE
SynWH7803_0268 Blast Hits [TAIR_pep] AT2G05990.2 | Symbols: MOD1, ENR1 | MOD1 (MOSAIC DEATH 1); enoyl-[acyl-carrier-protein] reductase (NADH)/ enoyl-[acyl-carrier-protein] reductase/ oxidoreductase | chr2:2322876-2324867 FORWARD
SynWH7803_0513 Blast Hits [TAIR_pep] AT3G17390.1 | Symbols: MTO3, SAMS3, MAT4 | MTO3 (METHIONINE OVER-ACCUMULATOR 3); methionine adenosyltransferase | chr3:5952484-5953665 REVERSE
SynWH7803_0637 Blast Hits [TAIR_pep] AT1G74470.1 | Symbols: | geranylgeranyl reductase | chr1:27991248-27992845 FORWARD
SynWH7803_0712 Blast Hits [TAIR_pep] AT1G03990.1 | Symbols: | alcohol oxidase-related | chr1:1024847-1027616 FORWARD
SynWH7803_0761 Blast Hits [TAIR_pep] AT1G04570.1 | Symbols: | integral membrane transporter family protein | chr1:1246859-1248600 REVERSE
SynWH7803_0811 Blast Hits [TAIR_pep] AT5G55020.1 | Symbols: ATMYB120, MYB120 | MYB120 (MYB DOMAIN PROTEIN 120); DNA binding / transcription factor | chr5:22324599-22326248 REVERSE
SynWH7803_0851 Blast Hits [TAIR_pep] AT3G45300.1 | Symbols: IVD, ATIVD | IVD (ISOVALERYL-COA-DEHYDROGENASE); ATP binding / isovaleryl-CoA dehydrogenase | chr3:16621659-16624848 REVERSE
SynWH7803_0960 Blast Hits [TAIR_pep] AT1G58248.1 | Symbols: | Encodes a Plant thionin family protein | chr1:21586036-21586311 REVERSE
SynWH7803_1002 Blast Hits [TAIR_pep] AT1G74470.1 | Symbols: | geranylgeranyl reductase | chr1:27991248-27992845 FORWARD
SynWH7803_1042 Blast Hits [TAIR_pep] AT3G26060.1 | Symbols: ATPRX Q | ATPRX Q; antioxidant/ peroxiredoxin | chr3:9524807-9526123 FORWARD
SynWH7803_1099 Blast Hits [TAIR_pep] AT1G66520.1 | Symbols: pde194 | pde194 (pigment defective 194); catalytic/ formyltetrahydrofolate deformylase/ hydroxymethyl-, formyl- and related transferase | chr1:24816330-24818693 REVERSE
SynWH7803_1100 Blast Hits [TAIR_pep] AT4G24880.1 | Symbols: | unknown protein | chr4:12808593-12811218 FORWARD
SynWH7803_1143 Blast Hits [TAIR_pep] AT1G66510.2 | Symbols: | AAR2 protein family | chr1:24812881-24815804 FORWARD
SynWH7803_1228 Blast Hits [TAIR_pep] AT5G61810.1 | Symbols: | mitochondrial substrate carrier family protein | chr5:24831843-24833735 REVERSE
SynWH7803_1300 Blast Hits [TAIR_pep] AT4G24880.1 | Symbols: | unknown protein | chr4:12808593-12811218 FORWARD
SynWH7803_1317 Blast Hits [TAIR_pep] AT1G74470.1 | Symbols: | geranylgeranyl reductase | chr1:27991248-27992845 FORWARD
SynWH7803_1733 Blast Hits [TAIR_pep] AT5G42480.1 | Symbols: ARC6 | ARC6 (ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6); protein binding | chr5:16985295-16988332 FORWARD
SynWH7803_1785 Blast Hits [TAIR_pep] AT1G71850.1 | Symbols: | ubiquitin thiolesterase | chr1:27024875-27026287 REVERSE
SynWH7803_2004 Blast Hits [TAIR_pep] AT1G66730.1 | Symbols: | ATP dependent DNA ligase family protein | chr1:24884991-24891823 FORWARD
SynWH7803_2054 Blast Hits [TAIR_pep] AT3G50010.1 | Symbols: | DC1 domain-containing protein | chr3:18537248-18539557 REVERSE
SynWH7803_2123 Blast Hits [TAIR_pep] AT3G24870.1 | Symbols: | DNA binding | chr3:9075237-9084278 REVERSE
SynWH7803_2142 Blast Hits [TAIR_pep] AT5G36210.1 | Symbols: | serine-type peptidase | chr5:14248202-14253272 REVERSE
SynWH7803_2172 Blast Hits [TAIR_pep] AT3G26060.1 | Symbols: ATPRX Q | ATPRX Q; antioxidant/ peroxiredoxin | chr3:9524807-9526123 FORWARD
SynWH7803_2203 Blast Hits [TAIR_pep] AT5G24810.1 | Symbols: | ABC1 family protein | chr5:8516902-8522616 REVERSE
SynWH7803_2265 Blast Hits [TAIR_pep] AT2G24820.1 | Symbols: TIC55 | TIC55 (TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 55); 2 iron, 2 sulfur cluster binding / electron carrier/ oxidoreductase | chr2:10575038-10576829 FORWARD
SynWH7803_2318 Blast Hits [TAIR_pep] AT1G60600.2 | Symbols: ABC4 | ABC4 (ABERRANT CHLOROPLAST DEVELOPMENT 4); 1,4-dihydroxy-2-naphthoate octaprenyltransferase/ prenyltransferase | chr1:22324807-22326759 REVERSE
SynWH7803_2320 Blast Hits [TAIR_pep] AT5G36210.1 | Symbols: | serine-type peptidase | chr5:14248202-14253272 REVERSE
SynWH7803_2331 Blast Hits [TAIR_pep] AT5G10330.2 | Symbols: EMB2196, HPA1, HISN6A, ATHPA1 | HPA1 (HISTIDINOL PHOSPHATE AMINOTRANSFERASE 1); histidinol-phosphate transaminase | chr5:3248027-3249858 REVERSE
SynWH7803_2362 Blast Hits [TAIR_pep] AT5G10330.2 | Symbols: EMB2196, HPA1, HISN6A, ATHPA1 | HPA1 (HISTIDINOL PHOSPHATE AMINOTRANSFERASE 1); histidinol-phosphate transaminase | chr5:3248027-3249858 REVERSE
SynWH7803_2376 Blast Hits [TAIR_pep] AT4G14870.1 | Symbols: | P-P-bond-hydrolysis-driven protein transmembrane transporter | chr4:8517248-8517781 FORWARD
SynWH7803_2394 Blast Hits [TAIR_pep] AT3G24870.1 | Symbols: | DNA binding | chr3:9075237-9084278 REVERSE
SynWH7803_2436 Blast Hits [TAIR_pep] AT1G58200.2 | Symbols: MSL3 | MSL3 (MscS-LIKE 3); ion channel | chr1:21548370-21552488 REVERSE

Word clouds

API

? | +/- | Top
Gene set by search TXT
ColumnDescription and example
1Data Source Namec.f. Synechocystis
2Gene IDc.f. slr1311
3Category nameone of gene_symbol, gi_gname, definition, function, goterm, interpro, blast_hits and 'Gene and Mutants'.
4DescriptionFree text
SET
ColumnDescription and example
1Gene IDc.f. slr1311
Table of contents (191)
2.614242719

MicrobeBase