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Full-text search result: 165 genes by "246" TXT SET

Synechococcus sp. WH 7803 (165 genes ) TXT SET

SynWH7803_0246 Gene product photosystem II reaction center protein PsbJ
Gene symbol psbJ
Function Not in COGs: Not in COGs
GO term Biological Process: photosynthesis (GO:0015979)
GO term Cellular Component: membrane (GO:0016020)
GO term Cellular Component: photosystem II reaction center (GO:0009539)
InterPro IPR002682 Photosystem II protein PsbJ; HMMPfam:PF01788 PsbJ
InterPro NULL NULL; BlastProDom:PD003776 PD003776
Blast Hits [TAIR_pep] ATCG00550.1 | Symbols: PSBJ | PSII component | chrC:63538-63660 REVERSE
Blast Hits [nr] ref|ZP_01123600.1| photosystem II reaction center protein PsbJ [Synechococcus sp. WH 7805] gi|116075548|ref|ZP_01472807.1| photosystem II reaction center protein PsbJ [Synechococcus sp. RS9916] gi|88788128|gb|EAR19284.1| photosystem II reaction center protein PsbJ [Synechococcus sp. WH 7805] gi|116066863|gb|EAU72618.1| photosystem II reaction center protein PsbJ [Synechococcus sp. RS9916]
Blast Hits [pln_est] gb|GR302885|GR302885 WRIC_501 cDNA library of a compatible interaction between stripe rust (Puccinia striiformis) and wheat Triticum aestivum cDNA 5' similar to cytochrome b559 alpha chain, mRNA sequence.
Blast Hits [sprot] PSBJ_SYNS3 (sp|Q0IDK0) Photosystem II reaction center protein J OS=Synechococcus sp. (strain CC9311) GN=psbJ PE=3 SV=1
SynWH7803_0305 InterPro IPR008136 CinA, C-terminal; HMMPfam:PF02464 CinA
SynWH7803_0312 InterPro IPR003398 Photosystem II protein PsbN; HMMPfam:PF02468 PsbN
SynWH7803_0479 InterPro IPR006246 Phycocyanin, alpha subunit; HMMTigr:TIGR01338 phycocy_alpha
SynWH7803_0645 InterPro NULL NULL; superfamily:SSF52467 SSF52467
SynWH7803_0869 InterPro NULL NULL; superfamily:SSF52467 SSF52467
SynWH7803_1206 InterPro IPR011054 Rudiment single hybrid motif; superfamily:SSF51246 Rudmnt_hyb_motif
SynWH7803_1246 Gene product Chaperone protein DnaK
Gene symbol dnaK
Function Posttranslational modification, protein turnover, chaperones: Posttranslational modification, protein turnover, chaperones
GO term Biological Process: protein folding (GO:0006457)
GO term Molecular Function: ATP binding (GO:0005524)
GO term Molecular Function: unfolded protein binding (GO:0051082)
InterPro IPR001023 Heat shock protein Hsp70; FPrintScan:PR00301 HEATSHOCK70
InterPro IPR001023 Heat shock protein Hsp70; HMMPanther:PTHR19375 Hsp70
InterPro IPR012725 Chaperone DnaK; HMMTigr:TIGR02350 prok_dnaK
InterPro IPR013126 Heat shock protein 70; HMMPfam:PF00012 HSP70
InterPro IPR018181 Heat shock protein 70, conserved site; PatternScan:PS00297 HSP70_1
InterPro IPR018181 Heat shock protein 70, conserved site; PatternScan:PS00329 HSP70_2
InterPro IPR018181 Heat shock protein 70, conserved site; PatternScan:PS01036 HSP70_3
InterPro NULL NULL; Gene3D:G3DSA:2.60.34.10 G3DSA:2.60.34.10
InterPro NULL NULL; Gene3D:G3DSA:3.30.420.40 G3DSA:3.30.420.40
InterPro NULL NULL; Gene3D:G3DSA:3.90.640.10 G3DSA:3.90.640.10
InterPro NULL NULL; HMMPanther:PTHR19375:SF1 PTHR19375:SF1
InterPro NULL NULL; superfamily:SSF100920 SSF100920
InterPro NULL NULL; superfamily:SSF53067 SSF53067
Blast Hits [TAIR_pep] AT4G24280.1 | Symbols: cpHsc70-1 | cpHsc70-1 (chloroplast heat shock protein 70-1); ATP binding | chr4:12590094-12593437 FORWARD
Blast Hits [nr] ref|ZP_01124081.1| Molecular chaperone DnaK, heat shock protein hsp70 [Synechococcus sp. WH 7805] gi|88787559|gb|EAR18716.1| Molecular chaperone DnaK, heat shock protein hsp70 [Synechococcus sp. WH 7805]
Blast Hits [pln_est] gb|FG227684|FG227684 cucurbitaSpp_003557 Cucurbita maxima (winter squash) phloem Cucurbita maxima cDNA, mRNA sequence.
Blast Hits [sprot] DNAK1_SYNPX (sp|Q7U6R7) Chaperone protein dnaK1 OS=Synechococcus sp. (strain WH8102) GN=dnaK1 PE=2 SV=1
SynWH7803_1627 InterPro NULL NULL; superfamily:SSF52467 SSF52467
SynWH7803_1707 InterPro IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase, core; HMMTigr:TIGR02467 CbiE
InterPro IPR014008 Cobalamin (vitamin B12) biosynthesis CbiT, precorrin-6Y methyltransferase-core; HMMTigr:TIGR02469 CbiT
Blast Hits [TAIR_pep] AT5G50240.3 | Symbols: PIMT2 | PIMT2 (PROTEIN-L-ISOASPARTATE METHYLTRANSFERASE 2); protein-L-isoaspartate (D-aspartate) O-methyltransferase | chr5:20451671-20452461 FORWARD
Blast Hits [nr] ref|ZP_01124612.1| putative precorrin-6y methylase [Synechococcus sp. WH 7805] gi|88787045|gb|EAR18203.1| putative precorrin-6y methylase [Synechococcus sp. WH 7805]
SynWH7803_1832 InterPro IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1; HMMPanther:PTHR10804:SF13 Pept_M24A_MAP1
InterPro IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1; HMMTigr:TIGR00500 met_pdase_I
InterPro IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1; PatternScan:PS00680 MAP_1
SynWH7803_1851 InterPro IPR011054 Rudiment single hybrid motif; superfamily:SSF51246 Rudmnt_hyb_motif
SynWH7803_1962 InterPro IPR011054 Rudiment single hybrid motif; superfamily:SSF51246 Rudmnt_hyb_motif
SynWH7803_2015 InterPro IPR012668 Conserved hypothetical protein CHP02466; HMMTigr:TIGR02466 CHP02466
SynWH7803_2124 InterPro IPR003395 RecF/RecN/SMC protein, N-terminal; HMMPfam:PF02463 SMC_N
SynWH7803_2128 InterPro IPR011054 Rudiment single hybrid motif; superfamily:SSF51246 Rudmnt_hyb_motif
SynWH7803_2436 InterPro IPR006686 Mechanosensitive ion channel MscS, conserved site; PatternScan:PS01246 UPF0003
SynWH7803_2460 Gene product Starvation-inducible DNA-binding protein
Gene symbol dps
Function Inorganic ion transport and metabolism: Inorganic ion transport and metabolism
GO term Biological Process: cellular iron ion homeostasis (GO:0006879)
GO term Biological Process: oxidation reduction (GO:0055114)
GO term Biological Process: response to stress (GO:0006950)
GO term Molecular Function: ferric iron binding (GO:0008199)
GO term Molecular Function: oxidoreductase activity (GO:0016491)
GO term Molecular Function: transition metal ion binding (GO:0046914)
InterPro IPR002177 DNA-binding protein Dps; FPrintScan:PR01346 HELNAPAPROT
InterPro IPR002177 DNA-binding protein Dps; HMMPIR:PIRSF005900 Dps
InterPro IPR002177 DNA-binding protein Dps; PatternScan:PS00819 DPS_2
InterPro IPR008331 Ferritin/Dps protein; HMMPfam:PF00210 Ferritin
InterPro IPR009078 Ferritin/ribonucleotide reductase-like; superfamily:SSF47240 Ferritin/RR_like
Blast Hits [TAIR_pep] AT1G19850.1 | Symbols: MP, ARF5, IAA24 | MP (MONOPTEROS); transcription factor | chr1:6887353-6891182 FORWARD
Blast Hits [nr] ref|ZP_01124973.1| DpsA [Synechococcus sp. WH 7805] gi|88786684|gb|EAR17843.1| DpsA [Synechococcus sp. WH 7805]
Blast Hits [pln_est] gb|FG607772|FG607772 stem_S027_A08.SEQ Opium poppy stem cDNA library Papaver somniferum cDNA, mRNA sequence.
Blast Hits [sprot] Y1894_SYNY3 (sp|P73321) Uncharacterized protein slr1894 OS=Synechocystis sp. (strain PCC 6803) GN=slr1894 PE=3 SV=1
SynWH7803_2461 Gene product CTP synthetase
Gene symbol pyrG
Function Nucleotide transport and metabolism: Nucleotide transport and metabolism
GO term Biological Process: pyrimidine nucleotide biosynthetic process (GO:0006221)
GO term Molecular Function: CTP synthase activity (GO:0003883)
GO term Molecular Function: catalytic activity (GO:0003824)
InterPro IPR000991 Glutamine amidotransferase class-I, C-terminal; HMMPfam:PF00117 GATase
InterPro IPR004468 CTP synthase; HMMTigr:TIGR00337 PyrG
InterPro IPR017456 CTP synthase, N-terminal; HMMPfam:PF06418 CTP_synth_N
InterPro IPR017926 Glutamine amidotransferase type 1; ProfileScan:PS51273 GATASE_TYPE_1
InterPro NULL NULL; Gene3D:G3DSA:3.40.50.880 G3DSA:3.40.50.880
InterPro NULL NULL; HMMPanther:PTHR11550 PyrG_synth
InterPro NULL NULL; superfamily:SSF52317 SSF52317
InterPro NULL NULL; superfamily:SSF52540 SSF52540
Blast Hits [TAIR_pep] AT4G02120.1 | Symbols: | CTP synthase, putative / UTP--ammonia ligase, putative | chr4:940873-944097 FORWARD
Blast Hits [nr] ref|ZP_01124972.1| CTP synthetase [Synechococcus sp. WH 7805] gi|88786683|gb|EAR17842.1| CTP synthetase [Synechococcus sp. WH 7805]
Blast Hits [pln_est] dbj|ES334655|ES334655 CTZ10-H04.y1d-s SHGC-CTZ Ostreococcus lucimarinus CCE9901 cDNA 5', mRNA sequence.
Blast Hits [sprot] PYRG_SYNS3 (sp|Q0I677) CTP synthase OS=Synechococcus sp. (strain CC9311) GN=pyrG PE=3 SV=1
SynWH7803_2462 Gene product Organic radical activating enzyme
Function Posttranslational modification, protein turnover, chaperones: Posttranslational modification, protein turnover, chaperones
GO term Molecular Function: catalytic activity (GO:0003824)
GO term Molecular Function: iron-sulfur cluster binding (GO:0051536)
InterPro IPR007197 Radical SAM; HMMPfam:PF04055 Radical_SAM
InterPro NULL NULL; superfamily:SSF102114 SSF102114
Blast Hits [TAIR_pep] AT2G30390.1 | Symbols: FC2, FC-II, ATFC-II | FC2 (FERROCHELATASE 2); ferrochelatase | chr2:12951242-12953985 REVERSE
Blast Hits [nr] ref|ZP_01124971.1| possible organic radical activating enzyme [Synechococcus sp. WH 7805] gi|88786682|gb|EAR17841.1| possible organic radical activating enzyme [Synechococcus sp. WH 7805]
Blast Hits [pln_est] gb|FG599625|FG599625 PF_T3_03R_F12_24JUL2003_086 Opium poppy root cDNA library Papaver somniferum cDNA, mRNA sequence.
Blast Hits [sprot] YGCF_SHIFL (sp|P64556) 7-carboxy-7-deazaguanine synthase homolog OS=Shigella flexneri GN=ygcF PE=3 SV=1
SynWH7803_2463 Gene product Putative peptidase family protein with a signal peptide
Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Biological Process: proteolysis (GO:0006508)
GO term Molecular Function: metalloendopeptidase activity (GO:0004222)
InterPro IPR002886 Peptidase M23B; HMMPanther:PTHR21666:SF7 Peptidase_M23B
InterPro IPR011055 Duplicated hybrid motif; superfamily:SSF51261 Dup_hybrid_motif
InterPro IPR016047 Peptidase M23; HMMPfam:PF01551 Peptidase_M23
InterPro NULL NULL; HMMPanther:PTHR21666 PTHR21666
Blast Hits [TAIR_pep] AT5G17790.1 | Symbols: VAR3 | VAR3 (VARIEGATED 3); binding / zinc ion binding | chr5:5869810-5872671 REVERSE
Blast Hits [nr] ref|ZP_01124970.1| probable peptidase [Synechococcus sp. WH 7805] gi|88786681|gb|EAR17840.1| probable peptidase [Synechococcus sp. WH 7805]
Blast Hits [pln_est] gb|BJ603482|BJ603482 BJ603482 normalized full length cDNA library, chloronemata, caulonemata and rhizoid-like protonemata Physcomitrella patens subsp. patens cDNA clone pphn2f04 3', mRNA sequence.
Blast Hits [sprot] YIBP_ECOLI (sp|P37690) Uncharacterized protein yibP OS=Escherichia coli (strain K12) GN=yibP PE=4 SV=2
SynWH7803_2464 Gene product hypothetical protein
Function Posttranslational modification, protein turnover, chaperones: Posttranslational modification, protein turnover, chaperones
GO term Molecular Function: isomerase activity (GO:0016853)
InterPro IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type; HMMPfam:PF00639 Rotamase
InterPro IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type; ProfileScan:PS50198 PPIC_PPIASE_2
InterPro NULL NULL; superfamily:SSF54534 SSF54534
Blast Hits [TAIR_pep] AT1G55860.1 | Symbols: UPL1 | UPL1 (UBIQUITIN-PROTEIN LIGASE 1); ubiquitin-protein ligase | chr1:20879900-20895393 REVERSE
Blast Hits [nr] ref|ZP_01124969.1| hypothetical protein WH7805_09924 [Synechococcus sp. WH 7805] gi|88786680|gb|EAR17839.1| hypothetical protein WH7805_09924 [Synechococcus sp. WH 7805]
Blast Hits [pln_est] dbj|EG422200|EG422200 AYAJF56TR pooled cDNA populations Arabidopsis thaliana cDNA, mRNA sequence.
Blast Hits [sprot] SURA_COLP3 (sp|Q47VK0) Chaperone surA OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=surA PE=3 SV=1
SynWH7803_2466 Gene product ABC-type multidrug transport system, ATPase and permease components
Function Defense mechanisms: Defense mechanisms
GO term Biological Process: protein secretion by the type I secretion system (GO:0030253)
GO term Biological Process: proteolysis (GO:0006508)
GO term Biological Process: transmembrane transport (GO:0055085)
GO term Biological Process: transport (GO:0006810)
GO term Cellular Component: integral to membrane (GO:0016021)
GO term Cellular Component: type I protein secretion system complex (GO:0030256)
GO term Molecular Function: ATP binding (GO:0005524)
GO term Molecular Function: ATPase activity (GO:0016887)
GO term Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626)
GO term Molecular Function: nucleoside-triphosphatase activity (GO:0017111)
GO term Molecular Function: nucleotide binding (GO:0000166)
GO term Molecular Function: peptidase activity (GO:0008233)
GO term Molecular Function: protein transporter activity (GO:0008565)
InterPro IPR001140 ABC transporter, transmembrane domain; HMMPfam:PF00664 ABC_membrane
InterPro IPR003439 ABC transporter-like; HMMPfam:PF00005 ABC_tran
InterPro IPR003439 ABC transporter-like; ProfileScan:PS50893 ABC_TRANSPORTER_2
InterPro IPR003593 ATPase, AAA+ type, core; HMMSmart:SM00382 AAA
InterPro IPR005074 Peptidase C39, bacteriocin processing; ProfileScan:PS50990 PEPTIDASE_C39
InterPro IPR010132 ATPase, type I secretion system, HlyB; HMMTigr:TIGR01846 type_I_sec_HlyB
InterPro IPR011527 ABC transporter, transmembrane domain, type 1; superfamily:SSF90123 ABC_TM_1
InterPro IPR017871 ABC transporter, conserved site; PatternScan:PS00211 ABC_TRANSPORTER_1
InterPro IPR017940 ABC transporter integral membrane type 1; ProfileScan:PS50929 ABC_TM1F
InterPro NULL NULL; Gene3D:G3DSA:3.40.50.300 G3DSA:3.40.50.300
InterPro NULL NULL; HMMPanther:PTHR19242 PTHR19242
InterPro NULL NULL; HMMPanther:PTHR19242:SF87 PTHR19242:SF87
InterPro NULL NULL; superfamily:SSF52540 SSF52540
Blast Hits [TAIR_pep] AT4G28630.1 | Symbols: ATM1, ATATM1 | ATM1 (ABC TRANSPORTER OF THE MITOCHONDRION); ATPase, coupled to transmembrane movement of substances / transporter | chr4:14138535-14140895 REVERSE
Blast Hits [nr] ref|ZP_01124968.1| ABC transporter, multi drug efflux family protein [Synechococcus sp. WH 7805] gi|88786679|gb|EAR17838.1| ABC transporter, multi drug efflux family protein [Synechococcus sp. WH 7805]
Blast Hits [pln_est] gb|FF551706|FF551706 MOPFD88TF MOP Vigna unguiculata cDNA 5', mRNA sequence.
Blast Hits [sprot] LKTB_AGGAC (sp|P23702) Leukotoxin translocation ATP-binding protein lktB OS=Aggregatibacter actinomycetemcomitans GN=lktB PE=3 SV=1
SynWH7803_2467 Gene product hypothetical protein
Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Biological Process: protein secretion (GO:0009306)
GO term Cellular Component: membrane (GO:0016020)
GO term Molecular Function: protein transporter activity (GO:0008565)
InterPro IPR003997 RTX secretion protein D, Gram-negative bacteria; FPrintScan:PR01490 RTXTOXIND
InterPro IPR006143 Secretion protein HlyD; HMMPfam:PF00529 HlyD
InterPro NULL NULL; Gene3D:G3DSA:2.40.50.100 G3DSA:2.40.50.100
Blast Hits [TAIR_pep] AT2G35330.1 | Symbols: | protein binding / zinc ion binding | chr2:14869179-14871673 FORWARD
Blast Hits [nr] ref|ZP_01124967.1| possible transporter component [Synechococcus sp. WH 7805] gi|88786678|gb|EAR17837.1| possible transporter component [Synechococcus sp. WH 7805]
Blast Hits [pln_est] gb|FG599932|FG599932 PF_T3_07R_A04_25JUL2003_032 Opium poppy root cDNA library Papaver somniferum cDNA, mRNA sequence.
Blast Hits [sprot] HLYD_PASHA (sp|P16534) Leukotoxin secretion protein D OS=Pasteurella haemolytica GN=lktD PE=3 SV=1
SynWH7803_2468 Gene product Ecotin
Gene symbol eco
Function General function prediction only: General function prediction only
InterPro IPR005658 Proteinase inhibitor I11, ecotin; Gene3D:G3DSA:2.60.40.550 Prot_inh_ecotin
InterPro IPR005658 Proteinase inhibitor I11, ecotin; HMMPfam:PF03974 Ecotin
InterPro IPR005658 Proteinase inhibitor I11, ecotin; superfamily:SSF49772 Prot_inh_ecotin
Blast Hits [TAIR_pep] AT2G12190.1 | Symbols: | cytochrome P450, putative | chr2:4891807-4893345 REVERSE
Blast Hits [nr] ref|ZP_01124966.1| possible serine protease inhibitor [Synechococcus sp. WH 7805] gi|150382366|sp|A4CX36.1|ECOTL_SYNPV RecName: Full=Putative ecotin-like protein; Flags: Precursor gi|88786677|gb|EAR17836.1| possible serine protease inhibitor [Synechococcus sp. WH 7805]
Blast Hits [pln_est] gb|FL683396|FL683396 B_H18_D09_0414F_p4 Olea europaea cv. Leccino fruitlet Olea europaea cDNA, mRNA sequence.
Blast Hits [sprot] ECOTL_SYNPV (sp|A4CX36) Putative ecotin-like protein OS=Synechococcus sp. (strain WH7805) GN=WH7805_09909 PE=3 SV=1
SynWH7803_2469 Gene product Predicted PP-loop superfamily ATPase
Gene symbol exsB
Function General function prediction only: General function prediction only
GO term Biological Process: queuosine biosynthetic process (GO:0008616)
GO term Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds (GO:0016810)
InterPro IPR004479 Exoenzyme S synthesis protein B/queuosine synthesis; HMMPIR:PIRSF006293 ExsB
InterPro IPR004479 Exoenzyme S synthesis protein B/queuosine synthesis; HMMTigr:TIGR00364 ExsB
InterPro IPR018317 Queuosine synthesis-like; HMMPfam:PF06508 ExsB
InterPro NULL NULL; superfamily:SSF52402 SSF52402
Blast Hits [TAIR_pep] AT5G10240.2 | Symbols: ASN3 | ASN3 (ASPARAGINE SYNTHETASE 3); asparagine synthase (glutamine-hydrolyzing) | chr5:3212934-3216418 REVERSE
Blast Hits [nr] ref|YP_732051.1| exsB protein [Synechococcus sp. CC9311] gi|113881278|gb|ABI46236.1| exsB protein [Synechococcus sp. CC9311]
Blast Hits [pln_est] dbj|EY759665|EY759665 CR05-C1-100-018-E06-CT.F Mandarin leaf, greenhouse plant Citrus reticulata cDNA, mRNA sequence.
Blast Hits [sprot] QUEC_SYNS3 (sp|Q0I671) 7-cyano-7-deazaguanine synthase OS=Synechococcus sp. (strain CC9311) GN=queC PE=3 SV=2
SynWH7803_2530 InterPro IPR003395 RecF/RecN/SMC protein, N-terminal; HMMPfam:PF02463 SMC_N
SynWH7803_2246 Gene product photosystem I assembly protein Ycf3
Gene symbol ycf3
Function General function prediction only: General function prediction only
GO term Molecular Function: binding (GO:0005488)
InterPro IPR001440 Tetratricopeptide TPR-1; HMMPfam:PF00515 TPR_1
InterPro IPR011990 Tetratricopeptide-like helical; Gene3D:G3DSA:1.25.40.10 TPR-like_helical
InterPro IPR013026 Tetratricopeptide repeat-containing; ProfileScan:PS50293 TPR_REGION
InterPro IPR019734 Tetratricopeptide repeat; ProfileScan:PS50005 TPR
InterPro NULL NULL; HMMPanther:PTHR23083 PTHR23083
InterPro NULL NULL; HMMPanther:PTHR23083:SF22 PTHR23083:SF22
InterPro NULL NULL; superfamily:SSF48452 SSF48452
Blast Hits [TAIR_pep] ATCG00360.1 | Symbols: YCF3 | Encodes a protein required for photosystem I assembly and stability. In Chlamydomonas reinhardtii, this protein seems to act as a PSI specific chaperone facilitating the assembly of the complex by interacting with PsaA and PsaD. A loss of function mutation in tobacco leads to a loss of photosystem I. | chrC:42584-43751 REVERSE
Blast Hits [nr] ref|ZP_01122612.1| photosystem I assembly protein Ycf3 [Synechococcus sp. WH 7805] gi|88788314|gb|EAR19469.1| photosystem I assembly protein Ycf3 [Synechococcus sp. WH 7805]
Blast Hits [pln_est] gb|CD822159|CD822159 BN25.044D17F011129 BN25 Brassica napus cDNA clone BN25044D17, mRNA sequence.
Blast Hits [sprot] YCF3_SYNS3 (sp|Q0I6Y9) Photosystem I assembly protein ycf3 OS=Synechococcus sp. (strain CC9311) GN=ycf3 PE=3 SV=1
SynWH7803_2465 Gene product hypothetical protein
Function Not in COGs: Not in COGs
Blast Hits [TAIR_pep] AT5G45650.1 | Symbols: | subtilase family protein | chr5:18513520-18518790 REVERSE
Blast Hits [nr] ref|XP_001513163.1| PREDICTED: similar to aftiphilin protein [Ornithorhynchus anatinus]
Blast Hits [sprot] YFDQ_ECOLI (sp|P76513) Uncharacterized protein yfdQ OS=Escherichia coli (strain K12) GN=yfdQ PE=4 SV=1
SynWH7803_0213 GO term Molecular Function: carbohydrate binding (GO:0030246)
SynWH7803_2068 GO term Molecular Function: carbohydrate binding (GO:0030246)
SynWH7803_2069 GO term Molecular Function: carbohydrate binding (GO:0030246)
SynWH7803_2345 GO term Molecular Function: carbohydrate binding (GO:0030246)
SynWH7803_2361 GO term Molecular Function: carbohydrate binding (GO:0030246)
SynWH7803_0276 Blast Hits [nr] ref|ZP_01123562.1| hypothetical protein WH7805_07811 [Synechococcus sp. WH 7805] gi|88788090|gb|EAR19246.1| hypothetical protein WH7805_07811 [Synechococcus sp. WH 7805]
SynWH7803_0685 Blast Hits [nr] ref|ZP_01123246.1| NADH dehydrogenase subunit L [Synechococcus sp. WH 7805] gi|88788948|gb|EAR20103.1| NADH dehydrogenase subunit L [Synechococcus sp. WH 7805]
SynWH7803_0722 Blast Hits [nr] ref|YP_731123.1| gluconolactonase precursor [Synechococcus sp. CC9311] gi|113881246|gb|ABI46204.1| gluconolactonase precursor [Synechococcus sp. CC9311]
SynWH7803_0884 Blast Hits [nr] ref|YP_001224603.1| hypothetical protein SynWH7803_0880 [Synechococcus sp. WH 7803] gi|147847755|emb|CAK23306.1| Conserved hypothetical protein [Synechococcus sp. WH 7803]
SynWH7803_0906 Blast Hits [nr] ref|YP_001224635.1| hypothetical protein SynWH7803_0912 [Synechococcus sp. WH 7803] gi|147847787|emb|CAK23338.1| Hypothetical protein [Synechococcus sp. WH 7803]
SynWH7803_0912 Blast Hits [nr] ref|YP_001224629.1| hypothetical protein SynWH7803_0906 [Synechococcus sp. WH 7803] gi|147847781|emb|CAK23332.1| Hypothetical protein [Synechococcus sp. WH 7803]
SynWH7803_0925 Blast Hits [nr] ref|ZP_01123768.1| hypothetical protein WH7805_01172 [Synechococcus sp. WH 7805] gi|88787246|gb|EAR18403.1| hypothetical protein WH7805_01172 [Synechococcus sp. WH 7805]
SynWH7803_1485 Blast Hits [nr] ref|ZP_01124380.1| hypothetical protein WH7805_04246 [Synechococcus sp. WH 7805] gi|88786813|gb|EAR17971.1| hypothetical protein WH7805_04246 [Synechococcus sp. WH 7805]
SynWH7803_1499 Blast Hits [nr] ref|YP_001772627.1| methyltransferase type 11 [Methylobacterium sp. 4-46] gi|168198246|gb|ACA20193.1| Methyltransferase type 11 [Methylobacterium sp. 4-46]
SynWH7803_1704 Blast Hits [nr] ref|ZP_01124605.1| hypothetical protein WH7805_05371 [Synechococcus sp. WH 7805] gi|88787038|gb|EAR18196.1| hypothetical protein WH7805_05371 [Synechococcus sp. WH 7805]
SynWH7803_1705 Blast Hits [nr] ref|ZP_01124610.1| hypothetical protein WH7805_05396 [Synechococcus sp. WH 7805] gi|88787043|gb|EAR18201.1| hypothetical protein WH7805_05396 [Synechococcus sp. WH 7805]
SynWH7803_1706 Blast Hits [nr] ref|ZP_01124611.1| hypothetical protein WH7805_05401 [Synechococcus sp. WH 7805] gi|88787044|gb|EAR18202.1| hypothetical protein WH7805_05401 [Synechococcus sp. WH 7805]
SynWH7803_1708 Blast Hits [nr] ref|ZP_01124615.1| hypothetical protein WH7805_05421 [Synechococcus sp. WH 7805] gi|88787048|gb|EAR18206.1| hypothetical protein WH7805_05421 [Synechococcus sp. WH 7805]
SynWH7803_1709 Blast Hits [nr] ref|ZP_01124616.1| two component transcriptional regulator, winged helix family protein [Synechococcus sp. WH 7805] gi|88787049|gb|EAR18207.1| two component transcriptional regulator, winged helix family protein [Synechococcus sp. WH 7805]
SynWH7803_1710 Blast Hits [nr] ref|ZP_01124617.1| inorganic polyphosphate/ATP-NAD kinase [Synechococcus sp. WH 7805] gi|88787050|gb|EAR18208.1| inorganic polyphosphate/ATP-NAD kinase [Synechococcus sp. WH 7805]
SynWH7803_1711 Blast Hits [TAIR_pep] AT3G07700.2 | Symbols: | ABC1 family protein | chr3:2459696-2463241 REVERSE
Blast Hits [nr] ref|ZP_01124618.1| ABC-1 [Synechococcus sp. WH 7805] gi|88787051|gb|EAR18209.1| ABC-1 [Synechococcus sp. WH 7805]
SynWH7803_1712 Blast Hits [nr] ref|ZP_01124619.1| Phenylalanyl-tRNA synthetase, alpha subunit [Synechococcus sp. WH 7805] gi|88787052|gb|EAR18210.1| Phenylalanyl-tRNA synthetase, alpha subunit [Synechococcus sp. WH 7805]
SynWH7803_1713 Blast Hits [nr] ref|ZP_01124620.1| stationary-phase survival protein SurE [Synechococcus sp. WH 7805] gi|88787053|gb|EAR18211.1| stationary-phase survival protein SurE [Synechococcus sp. WH 7805]
SynWH7803_1714 Blast Hits [nr] ref|ZP_01124621.1| hypothetical protein WH7805_05451 [Synechococcus sp. WH 7805] gi|88787054|gb|EAR18212.1| hypothetical protein WH7805_05451 [Synechococcus sp. WH 7805]
SynWH7803_1715 Blast Hits [nr] ref|ZP_01124622.1| putative riboflavin kinase/FAD synthase [Synechococcus sp. WH 7805] gi|88787055|gb|EAR18213.1| putative riboflavin kinase/FAD synthase [Synechococcus sp. WH 7805]
SynWH7803_1716 Blast Hits [nr] ref|ZP_01124624.1| thiamine-phosphate pyrophosphorylase [Synechococcus sp. WH 7805] gi|88787057|gb|EAR18215.1| thiamine-phosphate pyrophosphorylase [Synechococcus sp. WH 7805]
SynWH7803_1717 Blast Hits [nr] ref|ZP_01124625.1| hypothetical protein WH7805_05471 [Synechococcus sp. WH 7805] gi|88787058|gb|EAR18216.1| hypothetical protein WH7805_05471 [Synechococcus sp. WH 7805]
Blast Hits [pln_est] dbj|EV146533|EV146533 0212467 Brassica napus Very early anther Brassica napus cDNA, mRNA sequence.
SynWH7803_1718 Blast Hits [nr] ref|ZP_01124626.1| hypothetical protein WH7805_05476 [Synechococcus sp. WH 7805] gi|88787059|gb|EAR18217.1| hypothetical protein WH7805_05476 [Synechococcus sp. WH 7805]
SynWH7803_1721 Blast Hits [nr] ref|ZP_01124630.1| putative circadian phase modifier CpmA [Synechococcus sp. WH 7805] gi|88787063|gb|EAR18221.1| putative circadian phase modifier CpmA [Synechococcus sp. WH 7805]
SynWH7803_1722 Blast Hits [nr] ref|ZP_01124631.1| hypothetical protein WH7805_05501 [Synechococcus sp. WH 7805] gi|88787064|gb|EAR18222.1| hypothetical protein WH7805_05501 [Synechococcus sp. WH 7805]
SynWH7803_1723 Blast Hits [nr] ref|ZP_01124632.1| putative bifuntional enzyme: tRNA methyltransferase; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Synechococcus sp. WH 7805] gi|88787065|gb|EAR18223.1| putative bifuntional enzyme: tRNA methyltransferase; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Synechococcus sp. WH 7805]
SynWH7803_1724 Blast Hits [nr] ref|ZP_01124633.1| tRNA (guanine-N1)-methyltransferase [Synechococcus sp. WH 7805] gi|88787066|gb|EAR18224.1| tRNA (guanine-N1)-methyltransferase [Synechococcus sp. WH 7805]
SynWH7803_1725 Blast Hits [nr] ref|ZP_01124634.1| hypothetical protein WH7805_05516 [Synechococcus sp. WH 7805] gi|88787067|gb|EAR18225.1| hypothetical protein WH7805_05516 [Synechococcus sp. WH 7805]
SynWH7803_1726 Blast Hits [nr] ref|ZP_01124635.1| hypothetical protein WH7805_05521 [Synechococcus sp. WH 7805] gi|88787068|gb|EAR18226.1| hypothetical protein WH7805_05521 [Synechococcus sp. WH 7805]
SynWH7803_1727 Blast Hits [nr] ref|ZP_01124636.1| hypothetical protein WH7805_05526 [Synechococcus sp. WH 7805] gi|88787069|gb|EAR18227.1| hypothetical protein WH7805_05526 [Synechococcus sp. WH 7805]
SynWH7803_1728 Blast Hits [nr] ref|ZP_01124637.1| hypothetical protein WH7805_05531 [Synechococcus sp. WH 7805] gi|88787070|gb|EAR18228.1| hypothetical protein WH7805_05531 [Synechococcus sp. WH 7805]
SynWH7803_1729 Blast Hits [nr] ref|ZP_01124638.1| PhoH-like phosphate starvation-inducible protein [Synechococcus sp. WH 7805] gi|88787071|gb|EAR18229.1| PhoH-like phosphate starvation-inducible protein [Synechococcus sp. WH 7805]
SynWH7803_1730 Blast Hits [nr] ref|ZP_01124639.1| 30S ribosomal protein S16 [Synechococcus sp. WH 7805] gi|88787072|gb|EAR18230.1| 30S ribosomal protein S16 [Synechococcus sp. WH 7805]
SynWH7803_1731 Blast Hits [nr] ref|ZP_01124640.1| signal recognition particle protein (SRP54) [Synechococcus sp. WH 7805] gi|88787073|gb|EAR18231.1| signal recognition particle protein (SRP54) [Synechococcus sp. WH 7805]
SynWH7803_1733 Blast Hits [nr] ref|ZP_01124643.1| hypothetical protein WH7805_05561 [Synechococcus sp. WH 7805] gi|88787076|gb|EAR18234.1| hypothetical protein WH7805_05561 [Synechococcus sp. WH 7805]
SynWH7803_1734 Blast Hits [nr] ref|ZP_01124644.1| Pyruvate dehydrogenase E1 alpha subunit [Synechococcus sp. WH 7805] gi|88787077|gb|EAR18235.1| Pyruvate dehydrogenase E1 alpha subunit [Synechococcus sp. WH 7805]
SynWH7803_1735 Blast Hits [nr] ref|ZP_01124645.1| putative histone deacetylase/AcuC/AphA family protein [Synechococcus sp. WH 7805] gi|88787078|gb|EAR18236.1| putative histone deacetylase/AcuC/AphA family protein [Synechococcus sp. WH 7805]
SynWH7803_1736 Blast Hits [nr] ref|ZP_01124646.1| Type II alternative RNA polymerase sigma factor, sigma-70 family protein [Synechococcus sp. WH 7805] gi|88787079|gb|EAR18237.1| Type II alternative RNA polymerase sigma factor, sigma-70 family protein [Synechococcus sp. WH 7805]
SynWH7803_1737 Blast Hits [nr] ref|ZP_01124647.1| hypothetical protein WH7805_05581 [Synechococcus sp. WH 7805] gi|88787080|gb|EAR18238.1| hypothetical protein WH7805_05581 [Synechococcus sp. WH 7805]
SynWH7803_1738 Blast Hits [nr] ref|ZP_01124648.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Synechococcus sp. WH 7805] gi|88787081|gb|EAR18239.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Synechococcus sp. WH 7805]
SynWH7803_1739 Blast Hits [nr] ref|ZP_01124649.1| possible apolipoprotein n-acyltransferase [Synechococcus sp. WH 7805] gi|88787082|gb|EAR18240.1| possible apolipoprotein n-acyltransferase [Synechococcus sp. WH 7805]
SynWH7803_1740 Blast Hits [nr] ref|ZP_01124650.1| hypothetical protein WH7805_05596 [Synechococcus sp. WH 7805] gi|88787083|gb|EAR18241.1| hypothetical protein WH7805_05596 [Synechococcus sp. WH 7805]
SynWH7803_1741 Blast Hits [nr] ref|ZP_01124651.1| Peptidylprolyl isomerase [Synechococcus sp. WH 7805] gi|88787084|gb|EAR18242.1| Peptidylprolyl isomerase [Synechococcus sp. WH 7805]
SynWH7803_1742 Blast Hits [nr] ref|ZP_01124652.1| superoxide dismutase [Synechococcus sp. WH 7805] gi|88787085|gb|EAR18243.1| superoxide dismutase [Synechococcus sp. WH 7805]
SynWH7803_1743 Blast Hits [nr] ref|ZP_01124653.1| indole-3-glycerol-phosphate synthase [Synechococcus sp. WH 7805] gi|88787086|gb|EAR18244.1| indole-3-glycerol-phosphate synthase [Synechococcus sp. WH 7805]
SynWH7803_1744 Blast Hits [nr] ref|ZP_01124658.1| dihydrolipoamide dehydrogenase [Synechococcus sp. WH 7805] gi|88787091|gb|EAR18249.1| dihydrolipoamide dehydrogenase [Synechococcus sp. WH 7805]
SynWH7803_1745 Blast Hits [nr] ref|ZP_01124659.1| tRNA/rRNA methyltransferase (SpoU) [Synechococcus sp. WH 7805] gi|88787092|gb|EAR18250.1| tRNA/rRNA methyltransferase (SpoU) [Synechococcus sp. WH 7805]
SynWH7803_1746 Blast Hits [nr] ref|ZP_01124661.1| UDP-N-glucosamine 1-carboxyvinyltransferase [Synechococcus sp. WH 7805] gi|88787094|gb|EAR18252.1| UDP-N-glucosamine 1-carboxyvinyltransferase [Synechococcus sp. WH 7805]
SynWH7803_1747 Blast Hits [nr] ref|ZP_01124662.1| acetylornithine aminotransferase [Synechococcus sp. WH 7805] gi|88787095|gb|EAR18253.1| acetylornithine aminotransferase [Synechococcus sp. WH 7805]
SynWH7803_1748 Blast Hits [nr] ref|ZP_01124663.1| FolC bifunctional protein [Synechococcus sp. WH 7805] gi|88787096|gb|EAR18254.1| FolC bifunctional protein [Synechococcus sp. WH 7805]
SynWH7803_1749 Blast Hits [nr] ref|ZP_01124664.1| hypothetical protein WH7805_05666 [Synechococcus sp. WH 7805] gi|88787097|gb|EAR18255.1| hypothetical protein WH7805_05666 [Synechococcus sp. WH 7805]
SynWH7803_1750 Blast Hits [nr] ref|ZP_01124665.1| FAD linked oxidase, N-terminal [Synechococcus sp. WH 7805] gi|88787098|gb|EAR18256.1| FAD linked oxidase, N-terminal [Synechococcus sp. WH 7805]
SynWH7803_1751 Blast Hits [nr] ref|ZP_01124666.1| possible cytosine deaminase [Synechococcus sp. WH 7805] gi|88787099|gb|EAR18257.1| possible cytosine deaminase [Synechococcus sp. WH 7805]
SynWH7803_1752 Blast Hits [nr] ref|ZP_01124667.1| hypothetical protein WH7805_05681 [Synechococcus sp. WH 7805] gi|88787100|gb|EAR18258.1| hypothetical protein WH7805_05681 [Synechococcus sp. WH 7805]
SynWH7803_1753 Blast Hits [nr] ref|ZP_01124668.1| hypothetical protein WH7805_05686 [Synechococcus sp. WH 7805] gi|88787101|gb|EAR18259.1| hypothetical protein WH7805_05686 [Synechococcus sp. WH 7805]
SynWH7803_1754 Blast Hits [nr] ref|ZP_01124669.1| hypothetical protein WH7805_05691 [Synechococcus sp. WH 7805] gi|88787102|gb|EAR18260.1| hypothetical protein WH7805_05691 [Synechococcus sp. WH 7805]
SynWH7803_1755 Blast Hits [nr] ref|ZP_01124670.1| hypothetical protein WH7805_05696 [Synechococcus sp. WH 7805] gi|88787103|gb|EAR18261.1| hypothetical protein WH7805_05696 [Synechococcus sp. WH 7805]
SynWH7803_1756 Blast Hits [nr] ref|ZP_01124671.1| D-alanine--D-alanine ligase [Synechococcus sp. WH 7805] gi|88787104|gb|EAR18262.1| D-alanine--D-alanine ligase [Synechococcus sp. WH 7805]
SynWH7803_1757 Blast Hits [nr] ref|ZP_01124672.1| Uncharacterized secreted or membrane protein [Synechococcus sp. WH 7805] gi|88787105|gb|EAR18263.1| Uncharacterized secreted or membrane protein [Synechococcus sp. WH 7805]
SynWH7803_1758 Blast Hits [nr] ref|ZP_01124673.1| hypothetical protein WH7805_05711 [Synechococcus sp. WH 7805] gi|88787106|gb|EAR18264.1| hypothetical protein WH7805_05711 [Synechococcus sp. WH 7805]
SynWH7803_1759 Blast Hits [nr] ref|ZP_01124674.1| cell division protein FtsZ [Synechococcus sp. WH 7805] gi|88787107|gb|EAR18265.1| cell division protein FtsZ [Synechococcus sp. WH 7805]
SynWH7803_1761 Blast Hits [nr] ref|ZP_01124676.1| hypothetical protein WH7805_05726 [Synechococcus sp. WH 7805] gi|88787109|gb|EAR18267.1| hypothetical protein WH7805_05726 [Synechococcus sp. WH 7805]
SynWH7803_1762 Blast Hits [nr] ref|ZP_01124677.1| hypothetical protein WH7805_05731 [Synechococcus sp. WH 7805] gi|88787110|gb|EAR18268.1| hypothetical protein WH7805_05731 [Synechococcus sp. WH 7805]
SynWH7803_1764 Blast Hits [nr] ref|ZP_01124679.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp. WH 7805] gi|88787112|gb|EAR18270.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp. WH 7805]
SynWH7803_1765 Blast Hits [nr] ref|ZP_01124681.1| ketol-acid reductoisomerase [Synechococcus sp. WH 7805] gi|88787114|gb|EAR18272.1| ketol-acid reductoisomerase [Synechococcus sp. WH 7805]
SynWH7803_1766 Blast Hits [nr] ref|ZP_01124682.1| putative cobalamin biosynthetic protein [Synechococcus sp. WH 7805] gi|88787115|gb|EAR18273.1| putative cobalamin biosynthetic protein [Synechococcus sp. WH 7805]
SynWH7803_1767 Blast Hits [nr] ref|ZP_01124683.1| galactosyl-1-phosphate transferase [Synechococcus sp. WH 7805] gi|88787116|gb|EAR18274.1| galactosyl-1-phosphate transferase [Synechococcus sp. WH 7805]
SynWH7803_1768 Blast Hits [nr] ref|ZP_01124684.1| hypothetical protein WH7805_05766 [Synechococcus sp. WH 7805] gi|88787117|gb|EAR18275.1| hypothetical protein WH7805_05766 [Synechococcus sp. WH 7805]
SynWH7803_1804 Blast Hits [nr] ref|YP_731246.1| hypothetical protein sync_2043 [Synechococcus sp. CC9311] gi|113881646|gb|ABI46604.1| hypothetical protein sync_2043 [Synechococcus sp. CC9311]
SynWH7803_1913 Blast Hits [nr] ref|YP_001224630.1| hypothetical protein SynWH7803_0907 [Synechococcus sp. WH 7803] gi|147847782|emb|CAK23333.1| Hypothetical protein [Synechococcus sp. WH 7803]
SynWH7803_1947 Blast Hits [nr] ref|ZP_01079527.1| hypothetical protein RS9917_08716 [Synechococcus sp. RS9917] gi|86168246|gb|EAQ69503.1| hypothetical protein RS9917_08716 [Synechococcus sp. RS9917]
SynWH7803_2034 Blast Hits [nr] ref|ZP_01122874.1| hypothetical protein WH7805_12463 [Synechococcus sp. WH 7805] gi|88788576|gb|EAR19731.1| hypothetical protein WH7805_12463 [Synechococcus sp. WH 7805]
SynWH7803_2114 Blast Hits [nr] ref|YP_001224624.1| nuclease-like protein [Synechococcus sp. WH 7803] gi|147847776|emb|CAK23327.1| Staphylococcal nuclease homolog [Synechococcus sp. WH 7803]
SynWH7803_2328 Blast Hits [nr] ref|ZP_01125368.1| Prokaryotic diacylglycerol kinase [Synechococcus sp. WH 7805] gi|88786246|gb|EAR17407.1| Prokaryotic diacylglycerol kinase [Synechococcus sp. WH 7805]
SynWH7803_1196 Blast Hits [sprot] DNLI_OPITP (sp|B1ZZL9) Probable DNA ligase OS=Opitutus terrae (strain DSM 11246 / PB90-1) GN=lig PE=3 SV=1
SynWH7803_1311 Blast Hits [sprot] LPTB_THIFE (sp|P24693) Lipopolysaccharide export system ATP-binding protein lptB OS=Thiobacillus ferrooxidans GN=lptB PE=3 SV=1
SynWH7803_1536 Blast Hits [sprot] Y1167_SYNY3 (sp|P74246) Uncharacterized oxidoreductase slr1167 OS=Synechocystis sp. (strain PCC 6803) GN=slr1167 PE=3 SV=1
SynWH7803_2008 Blast Hits [sprot] NADD_SYNY3 (sp|P73246) Probable nicotinate-nucleotide adenylyltransferase OS=Synechocystis sp. (strain PCC 6803) GN=nadD PE=3 SV=1
SynWH7803_2220 Blast Hits [sprot] Y270_SYNE7 (sp|P42460) TPR repeat-containing protein Synpcc7942_0270 OS=Synechococcus elongatus (strain PCC 7942) GN=Synpcc7942_0270 PE=4 SV=1
SynWH7803_0508 Blast Hits [pln_est] gb|FF562246|FF562246 MUSRI92TF MUSR Musa acuminata cDNA 5', mRNA sequence.
SynWH7803_1060 Blast Hits [pln_est] gb|GR147359|GR147359 CCBX24683.b1 CCBX Mimulus guttatus IM62 floral buds (N) Mimulus guttatus cDNA clone CCBX24683 5', mRNA sequence.
SynWH7803_1193 Blast Hits [pln_est] gb|CB924652|CB924652 ABA1_1_C08.b1_A012 Abscisic acid-treated seedlings Sorghum bicolor cDNA clone ABA1_1_C08_A012 3', mRNA sequence.
SynWH7803_1386 Blast Hits [pln_est] gb|FC432465|FC432465 CBAW2321.fwd CBAW Physcomitrella patens subsp. patens Gransden - dessicated (H) Physcomitrella patens subsp. patens cDNA clone CBAW2321 5', mRNA sequence.
SynWH7803_1805 Blast Hits [pln_est] gb|GW081246|GW081246 CCUX11696.b1 CCUX Fragilariopsis cylindrus pooled RNA Fragilariopsis cylindrus cDNA clone CCUX11696 5', mRNA sequence.
SynWH7803_1967 Blast Hits [TAIR_pep] AT1G35680.1 | Symbols: | 50S ribosomal protein L21, chloroplast / CL21 (RPL21) | chr1:13208777-13210246 FORWARD
Blast Hits [pln_est] dbj|EC112466|EC112466 CIE00006163 Chlamydomonas incerta Regular library 2 Chlamydomonas incerta cDNA, mRNA sequence.
SynWH7803_2000 Blast Hits [pln_est] gb|GR302461|GR302461 WRIC_77 cDNA library of a compatible interaction between stripe rust (Puccinia striiformis) and wheat Triticum aestivum cDNA 5' similar to ATP synthase CF1 beta chain, mRNA sequence.
SynWH7803_2249 Blast Hits [pln_est] gb|FD524637|FD524637 RUS112H12r HY Hordeum vulgare subsp. vulgare cDNA clone HY01L23, mRNA sequence.
SynWH7803_2267 Blast Hits [pln_est] dbj|DR994096|DR994096 Mdas9005E10.g1 Apple_EST_Mdas Malus x domestica cDNA similar to emb|CAD21307.1| related to putative nucleotide binding protein (NUPB) [Neurospora crassa] gb|EAA32460.1| hypothetical protein [Neurospora crassa], mRNA sequence.
SynWH7803_2316 Blast Hits [pln_est] dbj|DN152462|DN152462 5222_H05_O10 Switchgrass callus cDNA library Panicum virgatum cDNA clone 5222_H05_O10 5', mRNA sequence.
SynWH7803_2349 Blast Hits [pln_est] dbj|EX407246|EX407246 GQ03518.B7_C02 GQ035 - Needles - End of season Picea glauca cDNA clone GQ03518_C02 5', mRNA sequence.
SynWH7803_0014 Blast Hits [TAIR_pep] AT5G04280.1 | Symbols: | glycine-rich RNA-binding protein | chr5:1192461-1195413 FORWARD
SynWH7803_0061 Blast Hits [TAIR_pep] AT2G24630.1 | Symbols: ATCSLC08, CSLC08, ATCSLC8 | ATCSLC08; cellulose synthase/ transferase, transferring glycosyl groups | chr2:10471558-10473984 REVERSE
SynWH7803_0075 Blast Hits [TAIR_pep] AT5G61140.1 | Symbols: | DEAD box RNA helicase, putative | chr5:24589999-24603311 FORWARD
SynWH7803_0166 Blast Hits [TAIR_pep] AT1G80460.1 | Symbols: NHO1, GLI1 | NHO1 (nonhost resistance to P. s. phaseolicola 1); carbohydrate kinase/ glycerol kinase | chr1:30246960-30249055 REVERSE
SynWH7803_0188 Blast Hits [TAIR_pep] AT5G48400.2 | Symbols: ATGLR1.2, GLR1.2 | ATGLR1.2; intracellular ligand-gated ion channel | chr5:19616244-19619246 FORWARD
SynWH7803_0191 Blast Hits [TAIR_pep] AT2G07050.1 | Symbols: CAS1 | CAS1 (cycloartenol synthase 1); cycloartenol synthase | chr2:2924629-2930295 FORWARD
SynWH7803_0217 Blast Hits [TAIR_pep] AT2G17130.1 | Symbols: IDH2 | IDH2 (ISOCITRATE DEHYDROGENASE SUBUNIT 2); isocitrate dehydrogenase (NAD+)/ oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor | chr2:7461062-7462466 REVERSE
SynWH7803_0224 Blast Hits [TAIR_pep] AT5G54770.1 | Symbols: THI1, TZ, THI4 | THI1; protein homodimerization | chr5:22246634-22247891 FORWARD
SynWH7803_0238 Blast Hits [TAIR_pep] AT3G54690.1 | Symbols: | sugar isomerase (SIS) domain-containing protein / CBS domain-containing protein | chr3:20246586-20247810 FORWARD
SynWH7803_0244 Blast Hits [TAIR_pep] AT1G26570.1 | Symbols: UGD1, ATUGD1 | UGD1 (UDP-GLUCOSE DEHYDROGENASE 1); NAD or NADH binding / UDP-glucose 6-dehydrogenase/ binding / catalytic/ coenzyme binding / oxidoreductase/ oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor | chr1:9182801-9184246 FORWARD
SynWH7803_0280 Blast Hits [TAIR_pep] AT1G60990.3 | Symbols: | aminomethyltransferase | chr1:22462771-22465416 REVERSE
SynWH7803_0547 Blast Hits [TAIR_pep] AT1G80460.1 | Symbols: NHO1, GLI1 | NHO1 (nonhost resistance to P. s. phaseolicola 1); carbohydrate kinase/ glycerol kinase | chr1:30246960-30249055 REVERSE
SynWH7803_0563 Blast Hits [TAIR_pep] AT2G24630.1 | Symbols: ATCSLC08, CSLC08, ATCSLC8 | ATCSLC08; cellulose synthase/ transferase, transferring glycosyl groups | chr2:10471558-10473984 REVERSE
SynWH7803_0688 Blast Hits [TAIR_pep] AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr5:24681550-24683514 FORWARD
SynWH7803_0731 Blast Hits [TAIR_pep] AT3G17930.1 | Symbols: | unknown protein | chr3:6142307-6143246 REVERSE
SynWH7803_0761 Blast Hits [TAIR_pep] AT1G04570.1 | Symbols: | integral membrane transporter family protein | chr1:1246859-1248600 REVERSE
SynWH7803_0805 Blast Hits [TAIR_pep] AT3G01660.1 | Symbols: | methyltransferase | chr3:245532-246432 FORWARD
SynWH7803_0916 Blast Hits [TAIR_pep] AT4G38050.1 | Symbols: | transmembrane transporter | chr4:17869529-17872461 REVERSE
SynWH7803_0942 Blast Hits [TAIR_pep] AT2G24690.1 | Symbols: | DNA binding / transcription factor | chr2:10499551-10503110 REVERSE
SynWH7803_1095 Blast Hits [TAIR_pep] AT3G01680.1 | Symbols: | unknown protein | chr3:252033-255246 FORWARD
SynWH7803_1129 Blast Hits [TAIR_pep] AT2G23050.1 | Symbols: NPY4 | NPY4 (NAKED PINS IN YUC MUTANTS 4); protein binding / signal transducer | chr2:9810785-9812468 FORWARD
SynWH7803_1136 Blast Hits [TAIR_pep] AT1G09960.1 | Symbols: SUT4, ATSUT4, suc4 | SUT4 (SUCROSE TRANSPORTER 4); carbohydrate transmembrane transporter/ sucrose transmembrane transporter/ sucrose:hydrogen symporter/ sugar:hydrogen symporter | chr1:3244258-3246718 FORWARD
SynWH7803_1172 Blast Hits [TAIR_pep] AT5G03550.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: carpel; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: meprin and TRAF homology domain-containing protein / MATH domain-containing protein (TAIR:AT2G42460.1); Has 63 Blast hits to 57 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:895813-896145 REVERSE
SynWH7803_1209 Blast Hits [TAIR_pep] AT1G09960.1 | Symbols: SUT4, ATSUT4, suc4 | SUT4 (SUCROSE TRANSPORTER 4); carbohydrate transmembrane transporter/ sucrose transmembrane transporter/ sucrose:hydrogen symporter/ sugar:hydrogen symporter | chr1:3244258-3246718 FORWARD
SynWH7803_1220 Blast Hits [TAIR_pep] AT4G27990.1 | Symbols: | YGGT family protein | chr4:13923991-13924647 REVERSE
SynWH7803_1259 Blast Hits [TAIR_pep] AT4G24620.1 | Symbols: PGI1, PGI | PGI1 (PHOSPHOGLUCOSE ISOMERASE 1); glucose-6-phosphate isomerase | chr4:12708972-12712610 REVERSE
SynWH7803_1301 Blast Hits [TAIR_pep] AT5G61410.2 | Symbols: RPE | RPE; catalytic/ ribulose-phosphate 3-epimerase | chr5:24684085-24685836 REVERSE
SynWH7803_1448 Blast Hits [TAIR_pep] AT1G24620.1 | Symbols: | polcalcin, putative / calcium-binding pollen allergen, putative | chr1:8723893-8724453 REVERSE
SynWH7803_1474 Blast Hits [TAIR_pep] AT3G07700.2 | Symbols: | ABC1 family protein | chr3:2459696-2463241 REVERSE
SynWH7803_1477 Blast Hits [TAIR_pep] AT1G66210.1 | Symbols: | subtilase family protein | chr1:24665735-24668650 REVERSE
SynWH7803_1769 Blast Hits [TAIR_pep] AT1G03360.1 | Symbols: ATRRP4 | ATRRP4 (ARABIDOPSIS THALIANA RIBOSOMAL RNA PROCESSING 4); RNA binding / exonuclease | chr1:824653-826179 FORWARD
SynWH7803_1789 Blast Hits [TAIR_pep] AT2G33010.1 | Symbols: | ubiquitin-associated (UBA)/TS-N domain-containing protein | chr2:14010892-14013246 FORWARD
SynWH7803_1876 Blast Hits [TAIR_pep] AT2G20690.1 | Symbols: | lumazine-binding family protein | chr2:8923342-8924621 FORWARD
SynWH7803_1936 Blast Hits [TAIR_pep] AT1G66250.1 | Symbols: | glycosyl hydrolase family 17 protein | chr1:24693063-24695416 FORWARD
SynWH7803_1949 Blast Hits [TAIR_pep] AT1G31400.1 | Symbols: | meprin and TRAF homology domain-containing protein / MATH domain-containing protein | chr1:11245225-11246481 REVERSE
SynWH7803_1975 Blast Hits [TAIR_pep] AT3G16130.1 | Symbols: ATROPGEF13, ROPGEF13 | ROPGEF13; Rho guanyl-nucleotide exchange factor | chr3:5466246-5468512 FORWARD
SynWH7803_2047 Blast Hits [TAIR_pep] AT1G10417.1 | Symbols: | Encodes protein with unknown function whose expression is repressed by inoculation with Agrobacterium tumerifaciens. | chr1:3424616-3427457 REVERSE
SynWH7803_2192 Blast Hits [TAIR_pep] AT1G14040.1 | Symbols: | LOCATED IN: integral to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331), EXS, C-terminal (InterPro:IPR004342); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G03240.1); Has 732 Blast hits to 696 proteins in 144 species: Archae - 0; Bacteria - 0; Metazoa - 238; Fungi - 246; Plants - 151; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). | chr1:4810488-4814543 FORWARD
SynWH7803_2268 Blast Hits [TAIR_pep] AT5G47460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr5:19252463-19254193 REVERSE
SynWH7803_2315 Blast Hits [TAIR_pep] AT1G68280.1 | Symbols: | thioesterase-related | chr1:25592467-25593595 REVERSE
SynWH7803_2380 Blast Hits [TAIR_pep] AT3G07700.2 | Symbols: | ABC1 family protein | chr3:2459696-2463241 REVERSE

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ColumnDescription and example
1Data Source Namec.f. Synechocystis
2Gene IDc.f. slr1311
3Category nameone of gene_symbol, gi_gname, definition, function, goterm, interpro, blast_hits and 'Gene and Mutants'.
4DescriptionFree text
SET
ColumnDescription and example
1Gene IDc.f. slr1311
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