| Gene set by search |
TXT
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| SynWH7803_1654 | Gene product | Putative mechanosensitive ion channel, MscS family |
| Function | Cell wall/membrane biogenesis: Cell wall/membrane biogenesis | |
| GO term | Biological Process: transmembrane transport (GO:0055085) | |
| GO term | Cellular Component: membrane (GO:0016020) | |
| InterPro | IPR006685 Mechanosensitive ion channel MscS; HMMPfam:PF00924 MS_channel | |
| InterPro | IPR010920 Like-Sm ribonucleoprotein (LSM)-related domain; superfamily:SSF50182 Sm_like_riboprot | |
| Blast Hits | [TAIR_pep] AT4G00290.1 | Symbols: | mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein | chr4:123097-125300 REVERSE | |
| Blast Hits | [nr] ref|ZP_01081282.1| possible mechanosensitive ion channel, MscS family protein [Synechococcus sp. RS9917] gi|86166737|gb|EAQ67999.1| possible mechanosensitive ion channel, MscS family protein [Synechococcus sp. RS9917] | |
| Blast Hits | [pln_est] dbj|EY167891|EY167891 CBTI1420.g1_G20.ab1:P Triphysaria pusilla root tip normalized cDNA library Triphysaria pusilla cDNA, mRNA sequence. | |
| Blast Hits | [sprot] YKUT_BACSU (sp|O34897) Uncharacterized mscS family protein ykuT OS=Bacillus subtilis GN=ykuT PE=2 SV=2 | |
| SynWH7803_1339 | Blast Hits | [nr] ref|YP_001017663.1| hypothetical protein P9303_16541 [Prochlorococcus marinus str. MIT 9303] gi|123963642|gb|ABM78398.1| Uncharacterized conserved protein [Prochlorococcus marinus str. MIT 9303] |
| SynWH7803_2118 | Blast Hits | [nr] ref|YP_720448.1| hypothetical protein Tery_0523 [Trichodesmium erythraeum IMS101] gi|110165435|gb|ABG49975.1| hypothetical protein Tery_0523 [Trichodesmium erythraeum IMS101] |
| SynWH7803_0521 | Blast Hits | [sprot] Y1654_SYNY3 (sp|P72817) Uncharacterized protein sll1654 OS=Synechocystis sp. (strain PCC 6803) GN=sll1654 PE=3 SV=1 |
| SynWH7803_2350 | Blast Hits | [sprot] Y1654_SYNY3 (sp|P72817) Uncharacterized protein sll1654 OS=Synechocystis sp. (strain PCC 6803) GN=sll1654 PE=3 SV=1 |
| SynWH7803_0157 | Blast Hits | [TAIR_pep] AT2G22560.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: kinase interacting family protein (TAIR:AT5G10500.1); Has 47807 Blast hits to 30104 proteins in 1314 species: Archae - 612; Bacteria - 5009; Metazoa - 22214; Fungi - 3986; Plants - 1654; Viruses - 215; Other Eukaryotes - 14117 (source: NCBI BLink). | chr2:9585892-9588838 FORWARD |
| SynWH7803_0373 | Blast Hits | [TAIR_pep] AT2G25100.2 | Symbols: | ribonuclease HII family protein | chr2:10679767-10681654 REVERSE |
| Gene set by search |
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