| Gene set by search |
TXT
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| SynWH7803_0815 | InterPro | IPR013149 Alcohol dehydrogenase, zinc-binding; HMMPfam:PF00107 ADH_zinc_N |
| SynWH7803_0877 | InterPro | IPR013149 Alcohol dehydrogenase, zinc-binding; HMMPfam:PF00107 ADH_zinc_N |
| SynWH7803_1314 | Gene product | GTP-binding protein TypA/BipA homolog |
| Gene symbol | typA | |
| Function | Signal transduction mechanisms: Signal transduction mechanisms | |
| GO term | Cellular Component: intracellular (GO:0005622) | |
| GO term | Molecular Function: GTP binding (GO:0005525) | |
| GO term | Molecular Function: GTPase activity (GO:0003924) | |
| InterPro | IPR000640 Translation elongation factor EFG/EF2, C-terminal; Gene3D:G3DSA:3.30.70.240 Transl_elong_EFG/EF2_C | |
| InterPro | IPR000640 Translation elongation factor EFG/EF2, C-terminal; HMMPfam:PF00679 EFG_C | |
| InterPro | IPR000640 Translation elongation factor EFG/EF2, C-terminal; HMMSmart:SM00838 EFG_C | |
| InterPro | IPR000795 Protein synthesis factor, GTP-binding; FPrintScan:PR00315 ELONGATNFCT | |
| InterPro | IPR000795 Protein synthesis factor, GTP-binding; HMMPfam:PF00009 GTP_EFTU | |
| InterPro | IPR000795 Protein synthesis factor, GTP-binding; PatternScan:PS00301 EFACTOR_GTP | |
| InterPro | IPR004161 Translation elongation factor EFTu/EF1A, domain 2; HMMPfam:PF03144 GTP_EFTU_D2 | |
| InterPro | IPR005225 Small GTP-binding protein; HMMTigr:TIGR00231 small_GTP | |
| InterPro | IPR006298 GTP-binding protein TypA; HMMTigr:TIGR01394 TypA_BipA | |
| InterPro | IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel; superfamily:SSF50447 Translat_factor | |
| InterPro | IPR009022 Elongation factor G/III/V; superfamily:SSF54980 EFG_III_V | |
| InterPro | NULL NULL; Gene3D:G3DSA:3.40.50.300 G3DSA:3.40.50.300 | |
| InterPro | NULL NULL; HMMPanther:PTHR23115 PTHR23115 | |
| InterPro | NULL NULL; HMMPanther:PTHR23115:SF14 PTHR23115:SF14 | |
| InterPro | NULL NULL; superfamily:SSF52540 SSF52540 | |
| Blast Hits | [TAIR_pep] AT5G13650.1 | Symbols: | elongation factor family protein | chr5:4397821-4402364 FORWARD | |
| Blast Hits | [nr] ref|ZP_01124017.1| tyrosine binding protein [Synechococcus sp. WH 7805] gi|88787495|gb|EAR18652.1| tyrosine binding protein [Synechococcus sp. WH 7805] | |
| Blast Hits | [pln_est] gb|GO880141|GO880141 CLS_CLiFpEfSpn_81a1_1_k17cLibkit5LD_F09 CLS_CLiFpEfSPn_plant Festuca pratensis cDNA clone 81k17 5', mRNA sequence. | |
| Blast Hits | [sprot] TYPA_SYNY3 (sp|P72749) GTP-binding protein TypA/BipA homolog OS=Synechocystis sp. (strain PCC 6803) GN=typA PE=3 SV=1 | |
| SynWH7803_2330 | Blast Hits | [sprot] Y1314_THEON (sp|B6YXJ1) UPF0173 metal-dependent hydrolase TON_1314 OS=Thermococcus onnurineus (strain NA1) GN=TON_1314 PE=3 SV=1 |
| SynWH7803_0157 | Blast Hits | [TAIR_pep] AT2G22560.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: kinase interacting family protein (TAIR:AT5G10500.1); Has 47807 Blast hits to 30104 proteins in 1314 species: Archae - 612; Bacteria - 5009; Metazoa - 22214; Fungi - 3986; Plants - 1654; Viruses - 215; Other Eukaryotes - 14117 (source: NCBI BLink). | chr2:9585892-9588838 FORWARD |
| SynWH7803_1039 | Blast Hits | [TAIR_pep] AT4G25840.1 | Symbols: GPP1 | GPP1 (glycerol-3-phosphatase 1); catalytic/ hydrolase | chr4:13139026-13140719 FORWARD |
| SynWH7803_1920 | Blast Hits | [TAIR_pep] AT1G61150.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), CTLH, C-terminal to LisH motif (InterPro:IPR006595), LisH dimerisation motif (InterPro:IPR006594), CT11-RanBPM (InterPro:IPR013144); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G11110.1); Has 740 Blast hits to 708 proteins in 137 species: Archae - 0; Bacteria - 0; Metazoa - 401; Fungi - 144; Plants - 139; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). | chr1:22542928-22544355 FORWARD |
| SynWH7803_2066 | Blast Hits | [TAIR_pep] AT3G04790.1 | Symbols: | ribose 5-phosphate isomerase-related | chr3:1313365-1314195 FORWARD |
| SynWH7803_2257 | Blast Hits | [TAIR_pep] AT4G13850.3 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD |
| Gene set by search |
TXT
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