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Full-text search result: 168 genes by "072" TXT SET

Synechococcus sp. WH 7803 (168 genes ) TXT SET

SynWH7803_0003 InterPro IPR000728 AIR synthase related protein; HMMPfam:PF00586 AIRS
SynWH7803_0012 InterPro IPR010822 Sporulation stage II, protein E C-terminal; HMMPfam:PF07228 SpoIIE
SynWH7803_0030 InterPro IPR000728 AIR synthase related protein; HMMPfam:PF00586 AIRS
SynWH7803_0031 InterPro IPR002130 Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; ProfileScan:PS50072 CSA_PPIASE_2
SynWH7803_0072 Gene product Aspartate-semialdehyde dehydrogenase
Gene symbol asd
Function Amino acid transport and metabolism: Amino acid transport and metabolism
GO term Biological Process: cellular amino acid biosynthetic process (GO:0008652)
GO term Biological Process: cellular amino acid metabolic process (GO:0006520)
GO term Biological Process: metabolic process (GO:0008152)
GO term Biological Process: methionine biosynthetic process (GO:0009086)
GO term Biological Process: oxidation reduction (GO:0055114)
GO term Biological Process: threonine biosynthetic process (GO:0009088)
GO term Cellular Component: cytoplasm (GO:0005737)
GO term Molecular Function: NAD or NADH binding (GO:0051287)
GO term Molecular Function: NADP or NADPH binding (GO:0050661)
GO term Molecular Function: aspartate-semialdehyde dehydrogenase activity (GO:0004073)
GO term Molecular Function: binding (GO:0005488)
GO term Molecular Function: catalytic activity (GO:0003824)
GO term Molecular Function: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (GO:0016620)
GO term Molecular Function: protein dimerization activity (GO:0046983)
InterPro IPR000534 Semialdehyde dehydrogenase, NAD-binding; HMMPfam:PF01118 Semialdhyde_dh
InterPro IPR000534 Semialdehyde dehydrogenase, NAD-binding; HMMSmart:SM00859 Semialdhyde_dh
InterPro IPR005986 Aspartate-semialdehyde dehydrogenase, bacterial; HMMTigr:TIGR01296 asd_B
InterPro IPR012080 Aspartate-semialdehyde dehydrogenase; HMMPIR:PIRSF000148 ASA_dh
InterPro IPR012280 Semialdehyde dehydrogenase, dimerisation domain; HMMPfam:PF02774 Semialdhyde_dhC
InterPro IPR016040 NAD(P)-binding domain; Gene3D:G3DSA:3.40.50.720 NAD(P)-bd
InterPro IPR016040 NAD(P)-binding domain; superfamily:SSF51735 NAD(P)-bd
InterPro NULL NULL; HMMPanther:PTHR10174 PTHR10174
InterPro NULL NULL; HMMPanther:PTHR10174:SF2 PTHR10174:SF2
InterPro NULL NULL; superfamily:SSF55347 SSF55347
Blast Hits [TAIR_pep] AT1G14810.1 | Symbols: | semialdehyde dehydrogenase family protein | chr1:5102684-5104633 REVERSE
Blast Hits [nr] ref|ZP_01125463.1| Aspartate-semialdehyde dehydrogenase, USG-1 related protein [Synechococcus sp. WH 7805] gi|88786148|gb|EAR17310.1| Aspartate-semialdehyde dehydrogenase, USG-1 related protein [Synechococcus sp. WH 7805]
Blast Hits [pln_est] dbj|ES333614|ES333614 CTZ96-C03.y1d-s SHGC-CTZ Ostreococcus lucimarinus CCE9901 cDNA 5', mRNA sequence.
Blast Hits [sprot] DHAS_PROMA (sp|P49420) Aspartate-semialdehyde dehydrogenase OS=Prochlorococcus marinus GN=asd PE=3 SV=2
SynWH7803_0173 InterPro IPR007221 Rod shape-determining protein MreC; HMMPfam:PF04085 MreC
SynWH7803_0176 InterPro IPR001789 Signal transduction response regulator, receiver domain; HMMPfam:PF00072 Response_reg
SynWH7803_0194 InterPro IPR007267 GtrA-like protein; HMMPfam:PF04138 GtrA
SynWH7803_0219 InterPro IPR007267 GtrA-like protein; HMMPfam:PF04138 GtrA
SynWH7803_0221 InterPro IPR002051 Haem oxygenase; HMMPanther:PTHR10720 Haem_Oase
SynWH7803_0241 InterPro IPR000728 AIR synthase related protein; HMMPfam:PF00586 AIRS
SynWH7803_0285 InterPro IPR011613 Glycoside hydrolase 15-related; HMMPfam:PF00723 Glyco_hydro_15
SynWH7803_0364 InterPro IPR007210 ABC-type glycine betaine transport system, substrate-binding domain; HMMPfam:PF04069 OpuAC
SynWH7803_0367 InterPro IPR006638 Elongator protein 3/MiaB/NifB; HMMSmart:SM00729 Elp3
SynWH7803_0371 InterPro IPR006638 Elongator protein 3/MiaB/NifB; HMMSmart:SM00729 Elp3
SynWH7803_0383 InterPro IPR000361 FeS cluster biogenesis; HMMPanther:PTHR10072 HesB_yadR_yfhF
InterPro NULL NULL; HMMPanther:PTHR10072:SF26 PTHR10072:SF26
Blast Hits [nr] ref|ZP_01123451.1| hypothetical protein WH7805_07256 [Synechococcus sp. WH 7805] gi|88787979|gb|EAR19135.1| hypothetical protein WH7805_07256 [Synechococcus sp. WH 7805]
SynWH7803_0387 InterPro IPR006638 Elongator protein 3/MiaB/NifB; HMMSmart:SM00729 Elp3
SynWH7803_0472 InterPro IPR000728 AIR synthase related protein; HMMPfam:PF00586 AIRS
SynWH7803_0515 InterPro NULL NULL; HMMPanther:PTHR10724 PTHR10724
SynWH7803_0614 InterPro IPR011148 N-acetylglutamate kinase; HMMPIR:PIRSF000728 NAGK
SynWH7803_0622 InterPro IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain; HMMPfam:PF04073 YbaK
InterPro IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain; superfamily:SSF55826 YbaK/aa-tRNA-synth-assoc-reg
SynWH7803_0628 InterPro IPR000223 Peptidase S26A, signal peptidase I; FPrintScan:PR00727 LEADERPTASE
SynWH7803_0650 InterPro IPR003730 Multi-copper polyphenol oxidoreductase, laccase; HMMTigr:TIGR00726 DUF152
SynWH7803_0652 InterPro NULL NULL; HMMPanther:PTHR10724 PTHR10724
SynWH7803_0720 Gene product dihydroorotase
Gene symbol pyrC
Function Nucleotide transport and metabolism: Nucleotide transport and metabolism
GO term Biological Process: pyrimidine base biosynthetic process (GO:0019856)
GO term Molecular Function: dihydroorotase activity (GO:0004151)
GO term Molecular Function: hydrolase activity (GO:0016787)
GO term Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides (GO:0016812)
InterPro IPR002195 Dihydroorotase, conserved site; PatternScan:PS00482 DIHYDROOROTASE_1
InterPro IPR002195 Dihydroorotase, conserved site; PatternScan:PS00483 DIHYDROOROTASE_2
InterPro IPR004721 Dihydroorotase homodimeric type; HMMPIR:PIRSF001237 DHOdimr
InterPro IPR004721 Dihydroorotase homodimeric type; HMMTigr:TIGR00856 pyrC_dimer
InterPro IPR006680 Amidohydrolase 1; HMMPfam:PF01979 Amidohydro_1
InterPro NULL NULL; Gene3D:G3DSA:3.20.20.140 G3DSA:3.20.20.140
InterPro NULL NULL; HMMPanther:PTHR11647 PTHR11647
InterPro NULL NULL; HMMPanther:PTHR11647:SF5 PTHR11647:SF5
InterPro NULL NULL; superfamily:SSF51556 SSF51556
Blast Hits [TAIR_pep] AT4G22930.1 | Symbols: PYR4, DHOASE | PYR4 (PYRIMIDIN 4); dihydroorotase/ hydrolase/ hydrolase, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides | chr4:12019315-12021200 FORWARD
Blast Hits [nr] ref|ZP_01125051.1| dihydroorotase [Synechococcus sp. WH 7805] gi|88786294|gb|EAR17454.1| dihydroorotase [Synechococcus sp. WH 7805]
Blast Hits [pln_est] dbj|ES337047|ES337047 CTZ38-A11.x1d-t SHGC-CTZ Ostreococcus lucimarinus CCE9901 cDNA 3', mRNA sequence.
Blast Hits [sprot] PYRC_SYNR3 (sp|A5GR03) Dihydroorotase OS=Synechococcus sp. (strain RCC307) GN=pyrC PE=3 SV=1
SynWH7803_0721 Gene product hypothetical protein
Function Function unknown: Function unknown
InterPro IPR011051 Cupin, RmlC-type; superfamily:SSF51182 RmlC_like_cupin
InterPro IPR013096 Cupin 2, conserved barrel; HMMPfam:PF07883 Cupin_2
Blast Hits [TAIR_pep] AT5G07000.1 | Symbols: ATST2B, ST2B | ST2B (SULFOTRANSFERASE 2B); hydroxyjasmonate sulfotransferase/ sulfotransferase | chr5:2171651-2172694 REVERSE
Blast Hits [nr] ref|YP_731124.1| hypothetical protein sync_1921 [Synechococcus sp. CC9311] gi|113882645|gb|ABI47603.1| conserved hypothetical protein [Synechococcus sp. CC9311]
Blast Hits [pln_est] gb|BJ872371|BJ872371 BJ872371 Marchantia polymorpha sexual organ E Marchantia polymorpha cDNA clone lwb7n09 5', mRNA sequence.
Blast Hits [sprot] OXDC_BACSU (sp|O34714) Oxalate decarboxylase oxdC OS=Bacillus subtilis GN=oxdC PE=1 SV=1
SynWH7803_0722 Gene product Gluconolactonase
Function Carbohydrate transport and metabolism: Carbohydrate transport and metabolism
InterPro IPR013658 SMP-30/Gluconolaconase/LRE-like region; HMMPfam:PF08450 SGL
InterPro NULL NULL; Gene3D:G3DSA:2.120.10.70 G3DSA:2.120.10.70
InterPro NULL NULL; HMMPanther:PTHR10907 PTHR10907
InterPro NULL NULL; HMMPanther:PTHR10907:SF4 PTHR10907:SF4
InterPro NULL NULL; superfamily:SSF63829 SSF63829
Blast Hits [TAIR_pep] AT3G59530.2 | Symbols: | strictosidine synthase family protein | chr3:21993710-21995164 FORWARD
Blast Hits [nr] ref|YP_731123.1| gluconolactonase precursor [Synechococcus sp. CC9311] gi|113881246|gb|ABI46204.1| gluconolactonase precursor [Synechococcus sp. CC9311]
Blast Hits [pln_est] dbj|EH745448|EH745448 CNMS5030.b1_K09.ab1 CNM(LMS) spotted knapweed Centaurea maculosa cDNA clone CNMS5030, mRNA sequence.
Blast Hits [sprot] GNL_ZYMMO (sp|Q01578) Gluconolactonase OS=Zymomonas mobilis GN=gnl PE=1 SV=2
SynWH7803_0723 Gene product Conserved hpothetical protein
Function Not in COGs: Not in COGs
InterPro IPR012903 Protein of unknown function, nitrogen fixation; HMMPfam:PF07862 Nif11
InterPro NULL NULL; HMMTigr:TIGR03798 Ocin_TIGR03798
Blast Hits [TAIR_pep] AT2G20010.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Munc13 homology 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25800.1); Has 93 Blast hits to 88 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | chr2:8637977-8640830 REVERSE
Blast Hits [nr] ref|ZP_01079848.1| hypothetical protein RS9917_10321 [Synechococcus sp. RS9917] gi|86168567|gb|EAQ69824.1| hypothetical protein RS9917_10321 [Synechococcus sp. RS9917]
Blast Hits [sprot] GLGA_PROMT (sp|Q46LU1) Glycogen synthase OS=Prochlorococcus marinus (strain NATL2A) GN=glgA PE=3 SV=1
SynWH7803_0724 Gene product hypothetical protein
Function General function prediction only: General function prediction only
InterPro IPR005624 Protein of unknown function DUF336; HMMPfam:PF03928 DUF336
Blast Hits [TAIR_pep] AT4G27180.1 | Symbols: ATK2, KATB | ATK2 (ARABIDOPSIS THALIANA KINESIN 2); microtubule binding / microtubule motor | chr4:13615057-13618689 REVERSE
Blast Hits [nr] ref|ZP_01079849.1| hypothetical protein RS9917_10326 [Synechococcus sp. RS9917] gi|86168568|gb|EAQ69825.1| hypothetical protein RS9917_10326 [Synechococcus sp. RS9917]
Blast Hits [pln_est] dbj|ES664641|ES664641 WS03925.C21_A16 SS-B-24 Picea sitchensis cDNA clone WS03925_A16 3', mRNA sequence.
Blast Hits [sprot] GLCG_ECOLI (sp|P0AEQ1) Protein glcG OS=Escherichia coli (strain K12) GN=glcG PE=3 SV=1
SynWH7803_0725 Gene product Glucose 1-dehydrogenase
Gene symbol gdh
Function Lipid transport and metabolism: Lipid transport and metabolism
GO term Biological Process: metabolic process (GO:0008152)
GO term Biological Process: oxidation reduction (GO:0055114)
GO term Molecular Function: binding (GO:0005488)
GO term Molecular Function: catalytic activity (GO:0003824)
GO term Molecular Function: oxidoreductase activity (GO:0016491)
InterPro IPR002198 Short-chain dehydrogenase/reductase SDR; FPrintScan:PR00080 SDRFAMILY
InterPro IPR002198 Short-chain dehydrogenase/reductase SDR; HMMPanther:PTHR19410 ADH_short_C2
InterPro IPR002198 Short-chain dehydrogenase/reductase SDR; HMMPfam:PF00106 adh_short
InterPro IPR002347 Glucose/ribitol dehydrogenase; FPrintScan:PR00081 GDHRDH
InterPro IPR016040 NAD(P)-binding domain; Gene3D:G3DSA:3.40.50.720 NAD(P)-bd
InterPro IPR016040 NAD(P)-binding domain; superfamily:SSF51735 NAD(P)-bd
InterPro IPR020904 Short-chain dehydrogenase/reductase, conserved site; PatternScan:PS00061 ADH_SHORT
InterPro NULL NULL; HMMPanther:PTHR19410:SF85 PTHR19410:SF85
Blast Hits [TAIR_pep] AT1G24360.1 | Symbols: | 3-oxoacyl-(acyl-carrier protein) reductase, chloroplast / 3-ketoacyl-acyl carrier protein reductase | chr1:8640820-8643283 FORWARD
Blast Hits [nr] ref|ZP_01079850.1| 3-oxoacyl-[acyl-carrier protein] reductase [Synechococcus sp. RS9917] gi|86168569|gb|EAQ69826.1| 3-oxoacyl-[acyl-carrier protein] reductase [Synechococcus sp. RS9917]
Blast Hits [pln_est] dbj|DT753872|DT753872 EST1187721 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1XA93, mRNA sequence.
Blast Hits [sprot] DHG2_BACME (sp|P39483) Glucose 1-dehydrogenase 2 OS=Bacillus megaterium GN=gdhII PE=3 SV=1
SynWH7803_0726 Gene product Conserved hypothetical protein related to Glyoxalase/Bleomycin resistance protein/Dioxygenase
Function Amino acid transport and metabolism: Amino acid transport and metabolism
GO term Molecular Function: lactoylglutathione lyase activity (GO:0004462)
GO term Molecular Function: metal ion binding (GO:0046872)
InterPro IPR018146 Glyoxalase I, conserved site; PatternScan:PS00934 GLYOXALASE_I_1
InterPro NULL NULL; Gene3D:G3DSA:3.10.180.10 G3DSA:3.10.180.10
InterPro NULL NULL; superfamily:SSF54593 SSF54593
Blast Hits [TAIR_pep] AT5G63590.1 | Symbols: FLS3 | FLS3 (FLAVONOL SYNTHASE 3); flavonol synthase | chr5:25457172-25458427 REVERSE
Blast Hits [nr] ref|YP_731120.1| hypothetical protein sync_1917 [Synechococcus sp. CC9311] gi|113882540|gb|ABI47498.1| conserved hypothetical protein [Synechococcus sp. CC9311]
Blast Hits [pln_est] dbj|EC884047|EC884047 ZM_BFc0021E18.r ZM_BFc Zea mays cDNA clone ZM_BFc0021E18 5', mRNA sequence.
Blast Hits [sprot] IF2_CARHZ (sp|Q3AB98) Translation initiation factor IF-2 OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=infB PE=3 SV=1
SynWH7803_0727 Gene product hypothetical protein
Function Function unknown: Function unknown
InterPro IPR011637 DoxX; HMMPfam:PF07681 DoxX
Blast Hits [TAIR_pep] AT3G44610.1 | Symbols: | protein kinase family protein | chr3:16188266-16192107 REVERSE
Blast Hits [nr] ref|ZP_01079852.1| hypothetical protein RS9917_10341 [Synechococcus sp. RS9917] gi|86168571|gb|EAQ69828.1| hypothetical protein RS9917_10341 [Synechococcus sp. RS9917]
Blast Hits [sprot] CATD_BACSU (sp|P54720) Putative oxidoreductase catD OS=Bacillus subtilis GN=catD PE=2 SV=1
SynWH7803_0728 Gene product Predicted flavoprotein related to choline dehydrogenase
Function Amino acid transport and metabolism: Amino acid transport and metabolism
GO term Molecular Function: FAD binding (GO:0050660)
GO term Molecular Function: oxidoreductase activity, acting on CH-OH group of donors (GO:0016614)
InterPro IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal; HMMPfam:PF00732 GMC_oxred_N
InterPro IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal; HMMPfam:PF05199 GMC_oxred_C
InterPro NULL NULL; Gene3D:G3DSA:3.50.50.60 G3DSA:3.50.50.60
InterPro NULL NULL; HMMPanther:PTHR11552 PTHR11552
InterPro NULL NULL; superfamily:SSF51905 SSF51905
Blast Hits [TAIR_pep] AT3G23410.1 | Symbols: | alcohol oxidase-related | chr3:8382860-8386024 FORWARD
Blast Hits [nr] ref|ZP_01079853.1| putative choline dehydrogenase [Synechococcus sp. RS9917] gi|86168572|gb|EAQ69829.1| putative choline dehydrogenase [Synechococcus sp. RS9917]
Blast Hits [pln_est] gb|FD737259|FD737259 WS03941.C21.1_C21 SS-B-24 Picea sitchensis cDNA clone WS03941_C21 3', mRNA sequence.
Blast Hits [sprot] GADH1_PECCY (sp|O34214) Gluconate 2-dehydrogenase flavoprotein OS=Pectobacterium cypripedii PE=1 SV=1
SynWH7803_0729 Gene product hypothetical protein
Function Not in COGs: Not in COGs
GO term Biological Process: oligosaccharide metabolic process (GO:0009311)
GO term Molecular Function: catalytic activity (GO:0003824)
GO term Molecular Function: mannosyl-oligosaccharide glucosidase activity (GO:0004573)
InterPro IPR004888 Glycoside hydrolase, family 63; HMMPfam:PF03200 Glyco_hydro_63
InterPro IPR008928 Six-hairpin glycosidase-like; superfamily:SSF48208 Glyco_trans_6hp
InterPro NULL NULL; HMMPanther:PTHR10412 PTHR10412
Blast Hits [TAIR_pep] AT1G24320.1 | Symbols: | alpha-glucosidase, putative | chr1:8626437-8630935 REVERSE
Blast Hits [nr] ref|ZP_01125053.1| hypothetical protein WH7805_00040 [Synechococcus sp. WH 7805] gi|88786296|gb|EAR17456.1| hypothetical protein WH7805_00040 [Synechococcus sp. WH 7805]
Blast Hits [pln_est] gb|FG604947|FG604947 PF_T3_71R_H11_04SEPT2003_081 Opium poppy root cDNA library Papaver somniferum cDNA, mRNA sequence.
Blast Hits [sprot] YM54_YEAST (sp|Q04336) Uncharacterized protein YMR196W OS=Saccharomyces cerevisiae GN=YMR196W PE=1 SV=1
SynWH7803_0761 InterPro IPR019664 Protein of unknown function DUF2518; HMMPfam:PF10726 DUF2518
SynWH7803_0838 InterPro IPR007263 Putative thiol-disulphide oxidoreductase DCC; HMMPfam:PF04134 DUF393
SynWH7803_0923 InterPro IPR001789 Signal transduction response regulator, receiver domain; HMMPfam:PF00072 Response_reg
SynWH7803_0999 InterPro IPR010721 Protein of unknown function DUF1295; HMMPfam:PF06966 DUF1295
SynWH7803_1020 InterPro IPR000223 Peptidase S26A, signal peptidase I; FPrintScan:PR00727 LEADERPTASE
SynWH7803_1038 InterPro IPR000092 Polyprenyl synthetase; PatternScan:PS00723 POLYPRENYL_SYNTHET_1
SynWH7803_1060 InterPro IPR020072 Glycosyl transferase, family 3, subgroup, N-terminal; Gene3D:G3DSA:1.20.970.10 Glyco_trans_3
SynWH7803_1072 Gene product Permease of the drug/metabolite transporter (DMT) superfamily
Function Carbohydrate transport and metabolism: Carbohydrate transport and metabolism
GO term Cellular Component: membrane (GO:0016020)
InterPro IPR000620 Protein of unknown function DUF6, transmembrane; HMMPfam:PF00892 DUF6
InterPro NULL NULL; HMMPanther:PTHR22911 PTHR22911
InterPro NULL NULL; HMMPanther:PTHR22911:SF6 PTHR22911:SF6
InterPro NULL NULL; superfamily:SSF103481 SSF103481
Blast Hits [TAIR_pep] AT2G05755.1 | Symbols: | integral membrane family protein | chr2:2170905-2173646 FORWARD
Blast Hits [nr] ref|ZP_01123946.1| hypothetical protein WH7805_02062 [Synechococcus sp. WH 7805] gi|88787424|gb|EAR18581.1| hypothetical protein WH7805_02062 [Synechococcus sp. WH 7805]
Blast Hits [pln_est] gb|CO489396|CO489396 GQ0259.B7_I14 GQ025: Annual flush SHOOTS diurnal cycle- trees Picea glauca cDNA clone GQ0259_I14 3', mRNA sequence.
Blast Hits [sprot] Y1234_HELPY (sp|O25832) Uncharacterized transporter HP_1234 OS=Helicobacter pylori GN=HP_1234 PE=3 SV=1
SynWH7803_1081 InterPro IPR006197 Peptidase S24, LexA-like, conserved region; FPrintScan:PR00726 LEXASERPTASE
SynWH7803_1086 InterPro IPR007297 Protein of unknown function DUF404, bacteria N-terminal; HMMPfam:PF04169 DUF404
SynWH7803_1138 InterPro IPR007269 Isoprenylcysteine carboxyl methyltransferase; HMMPfam:PF04140 ICMT
SynWH7803_1154 InterPro IPR011529 Glutamate 5-kinase, pro-B; HMMPIR:PIRSF000729 GK
SynWH7803_1251 InterPro IPR002130 Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; ProfileScan:PS50072 CSA_PPIASE_2
SynWH7803_1377 InterPro IPR001789 Signal transduction response regulator, receiver domain; HMMPfam:PF00072 Response_reg
SynWH7803_1385 InterPro IPR001789 Signal transduction response regulator, receiver domain; HMMPfam:PF00072 Response_reg
Blast Hits [TAIR_pep] AT2G25180.1 | Symbols: ARR12 | ARR12 (ARABIDOPSIS RESPONSE REGULATOR 12); transcription factor/ two-component response regulator | chr2:10724490-10726961 REVERSE
SynWH7803_1437 InterPro IPR007263 Putative thiol-disulphide oxidoreductase DCC; HMMPfam:PF04134 DUF393
Blast Hits [TAIR_pep] AT5G50100.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin-like fold (InterPro:IPR012336), Putative thiol-disulphide oxidoreductase DCC (InterPro:IPR007263); Has 598 Blast hits to 598 proteins in 152 species: Archae - 0; Bacteria - 266; Metazoa - 3; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). | chr5:20371916-20373172 FORWARD
SynWH7803_1449 InterPro IPR001789 Signal transduction response regulator, receiver domain; HMMPfam:PF00072 Response_reg
SynWH7803_1526 InterPro IPR006638 Elongator protein 3/MiaB/NifB; HMMSmart:SM00729 Elp3
SynWH7803_1530 InterPro IPR006638 Elongator protein 3/MiaB/NifB; HMMSmart:SM00729 Elp3
InterPro IPR010722 Biotin/thiamin synthesis-associated protein; HMMPfam:PF06968 BATS
InterPro IPR010722 Biotin/thiamin synthesis-associated protein; HMMSmart:SM00876 BATS
SynWH7803_1545 InterPro IPR001789 Signal transduction response regulator, receiver domain; HMMPfam:PF00072 Response_reg
SynWH7803_1569 InterPro IPR000092 Polyprenyl synthetase; PatternScan:PS00723 POLYPRENYL_SYNTHET_1
SynWH7803_1645 InterPro IPR002130 Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; ProfileScan:PS50072 CSA_PPIASE_2
SynWH7803_1694 InterPro IPR007247 Ureidoglycolate hydrolase; HMMPfam:PF04115 Ureidogly_hydro
SynWH7803_1746 InterPro IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; HMMTigr:TIGR01072 murA
SynWH7803_1755 InterPro IPR006638 Elongator protein 3/MiaB/NifB; HMMSmart:SM00729 Elp3
SynWH7803_1761 InterPro IPR006638 Elongator protein 3/MiaB/NifB; HMMSmart:SM00729 Elp3
InterPro IPR010723 HemN, C-terminal; HMMPfam:PF06969 HemN_C
SynWH7803_1783 InterPro IPR009908 Methylamine utilisation MauE; HMMPfam:PF07291 MauE
SynWH7803_1793 InterPro IPR001789 Signal transduction response regulator, receiver domain; HMMPfam:PF00072 Response_reg
SynWH7803_1826 InterPro IPR001972 Stomatin; FPrintScan:PR00721 STOMATIN
SynWH7803_1846 InterPro IPR008145 Guanylate kinase/L-type calcium channel; HMMSmart:SM00072 GuKc
SynWH7803_1865 InterPro IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase; HMMPfam:PF04131 NanE
SynWH7803_1886 InterPro IPR001789 Signal transduction response regulator, receiver domain; HMMPfam:PF00072 Response_reg
SynWH7803_1959 InterPro IPR010827 Surface antigen variable number; HMMPfam:PF07244 Surf_Ag_VNR
SynWH7803_2058 InterPro IPR006638 Elongator protein 3/MiaB/NifB; HMMSmart:SM00729 Elp3
SynWH7803_2061 InterPro IPR000722 RNA polymerase, alpha subunit; HMMPfam:PF00623 RNA_pol_Rpb1_2
SynWH7803_2072 Gene product ABC-type amino acid transport system, periplasmic component
Function Amino acid transport and metabolism: Amino acid transport and metabolism
GO term Biological Process: transport (GO:0006810)
GO term Cellular Component: outer membrane-bounded periplasmic space (GO:0030288)
GO term Molecular Function: transporter activity (GO:0005215)
InterPro IPR001638 Extracellular solute-binding protein, family 3; HMMPfam:PF00497 SBP_bac_3
InterPro IPR001638 Extracellular solute-binding protein, family 3; HMMSmart:SM00062 PBPb
InterPro NULL NULL; Gene3D:G3DSA:3.40.190.10 G3DSA:3.40.190.10
InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
InterPro NULL NULL; superfamily:SSF53850 SSF53850
Blast Hits [TAIR_pep] AT2G05752.1 | Symbols: | unknown protein | chr2:2169305-2170528 REVERSE
Blast Hits [nr] ref|ZP_01122830.1| possible ABC transporter, solute binding protein [Synechococcus sp. WH 7805] gi|88788532|gb|EAR19687.1| possible ABC transporter, solute binding protein [Synechococcus sp. WH 7805]
Blast Hits [pln_est] gb|FF382986|FF382986 MOOB920TF MOO Vigna unguiculata cDNA 5', mRNA sequence.
Blast Hits [sprot] BVGS_BORBR (sp|P26762) Virulence sensor protein bvgS OS=Bordetella bronchiseptica GN=bvgS PE=3 SV=2
SynWH7803_2478 InterPro IPR006638 Elongator protein 3/MiaB/NifB; HMMSmart:SM00729 Elp3
SynWH7803_2497 InterPro IPR020072 Glycosyl transferase, family 3, subgroup, N-terminal; Gene3D:G3DSA:1.20.970.10 Glyco_trans_3
SynWH7803_2507 InterPro IPR006638 Elongator protein 3/MiaB/NifB; HMMSmart:SM00729 Elp3
SynWH7803_2206 InterPro IPR006638 Elongator protein 3/MiaB/NifB; HMMSmart:SM00729 Elp3
SynWH7803_2208 InterPro IPR006638 Elongator protein 3/MiaB/NifB; HMMSmart:SM00729 Elp3
SynWH7803_2225 InterPro IPR000361 FeS cluster biogenesis; HMMPanther:PTHR10072 HesB_yadR_yfhF
InterPro NULL NULL; HMMPanther:PTHR10072:SF26 PTHR10072:SF26
SynWH7803_2242 InterPro IPR001789 Signal transduction response regulator, receiver domain; HMMPfam:PF00072 Response_reg
SynWH7803_2248 InterPro IPR001789 Signal transduction response regulator, receiver domain; HMMPfam:PF00072 Response_reg
SynWH7803_2270 InterPro IPR001789 Signal transduction response regulator, receiver domain; HMMPfam:PF00072 Response_reg
SynWH7803_2271 InterPro IPR001789 Signal transduction response regulator, receiver domain; HMMPfam:PF00072 Response_reg
Blast Hits [TAIR_pep] AT5G10720.1 | Symbols: AHK5, CKI2 | AHK5 (ARABIDOPSIS HISTIDINE KINASE 5); protein histidine kinase | chr5:3386835-3390541 FORWARD
SynWH7803_2272 InterPro IPR001789 Signal transduction response regulator, receiver domain; HMMPfam:PF00072 Response_reg
SynWH7803_2277 InterPro NULL NULL; HMMPfam:PF07298 NnrU
SynWH7803_2309 InterPro IPR001789 Signal transduction response regulator, receiver domain; HMMPfam:PF00072 Response_reg
SynWH7803_2361 InterPro IPR007235 Glycosyl transferase, family 28, C-terminal; HMMPfam:PF04101 Glyco_tran_28_C
SynWH7803_0023 GO term Molecular Function: heat shock protein binding (GO:0031072)
SynWH7803_0081 GO term Molecular Function: aspartate kinase activity (GO:0004072)
SynWH7803_0546 GO term Biological Process: glycerol-3-phosphate metabolic process (GO:0006072)
SynWH7803_0547 GO term Biological Process: glycerol-3-phosphate metabolic process (GO:0006072)
SynWH7803_0821 GO term Molecular Function: heat shock protein binding (GO:0031072)
SynWH7803_0857 GO term Molecular Function: heat shock protein binding (GO:0031072)
SynWH7803_0904 GO term Molecular Function: heat shock protein binding (GO:0031072)
SynWH7803_1247 GO term Molecular Function: heat shock protein binding (GO:0031072)
SynWH7803_1287 GO term Molecular Function: heat shock protein binding (GO:0031072)
SynWH7803_1491 GO term Molecular Function: heat shock protein binding (GO:0031072)
SynWH7803_1733 GO term Molecular Function: heat shock protein binding (GO:0031072)
SynWH7803_2050 GO term Molecular Function: heat shock protein binding (GO:0031072)
SynWH7803_2100 GO term Molecular Function: heat shock protein binding (GO:0031072)
SynWH7803_2233 GO term Molecular Function: heat shock protein binding (GO:0031072)
SynWH7803_2340 GO term Biological Process: small GTPase mediated signal transduction (GO:0007264)
SynWH7803_2394 GO term Biological Process: intracellular signaling cascade (GO:0007242)
SynWH7803_0077 Blast Hits [nr] ref|ZP_01125458.1| hypothetical protein WH7805_09072 [Synechococcus sp. WH 7805] gi|88786143|gb|EAR17305.1| hypothetical protein WH7805_09072 [Synechococcus sp. WH 7805]
SynWH7803_0110 Blast Hits [nr] ref|ZP_05046072.1| GDP-fucose synthetase [Cyanobium sp. PCC 7001] gi|197626822|gb|EDY39381.1| GDP-fucose synthetase [Cyanobium sp. PCC 7001]
SynWH7803_0292 Blast Hits [nr] ref|ZP_01123544.1| probable esterase [Synechococcus sp. WH 7805] gi|88788072|gb|EAR19228.1| probable esterase [Synechococcus sp. WH 7805]
SynWH7803_0378 Blast Hits [nr] ref|YP_292266.1| 30S ribosomal protein S10 [Prochlorococcus marinus str. NATL2A] gi|78185590|ref|YP_378024.1| 30S ribosomal protein S10 [Synechococcus sp. CC9902] gi|116072129|ref|ZP_01469397.1| 30S ribosomal protein S10 [Synechococcus sp. BL107] gi|124026653|ref|YP_001015768.1| 30S ribosomal protein S10 [Prochlorococcus marinus str. NATL1A] gi|115305644|sp|Q46IW5.1|RS10_PROMT RecName: Full=30S ribosomal protein S10 gi|118597333|sp|Q3AW52.1|RS10_SYNS9 RecName: Full=30S ribosomal protein S10 gi|166231309|sp|A2C4U4.1|RS10_PROM1 RecName: Full=30S ribosomal protein S10 gi|72002761|gb|AAZ58563.1| SSU ribosomal protein S10P [Prochlorococcus marinus str. NATL2A] gi|78169884|gb|ABB26981.1| SSU ribosomal protein S10P [Synechococcus sp. CC9902] gi|116065752|gb|EAU71510.1| 30S ribosomal protein S10 [Synechococcus sp. BL107] gi|123961721|gb|ABM76504.1| 30S ribosomal protein S10 [Prochlorococcus marinus str. NATL1A]
SynWH7803_0384 Blast Hits [nr] ref|ZP_01123450.1| hypothetical protein WH7805_07251 [Synechococcus sp. WH 7805] gi|88787978|gb|EAR19134.1| hypothetical protein WH7805_07251 [Synechococcus sp. WH 7805]
SynWH7803_0389 Blast Hits [nr] ref|ZP_01123440.1| hypothetical protein WH7805_07201 [Synechococcus sp. WH 7805] gi|88787968|gb|EAR19124.1| hypothetical protein WH7805_07201 [Synechococcus sp. WH 7805]
SynWH7803_0414 Blast Hits [nr] ref|NP_898178.1| 50S ribosomal protein L36 [Synechococcus sp. WH 8102] gi|78185542|ref|YP_377976.1| 50S ribosomal protein L36 [Synechococcus sp. CC9902] gi|87300893|ref|ZP_01083735.1| Ribosomal protein L36 [Synechococcus sp. WH 5701] gi|116072180|ref|ZP_01469448.1| Ribosomal protein L36 [Synechococcus sp. BL107] gi|254430396|ref|ZP_05044099.1| ribosomal protein L36 [Cyanobium sp. PCC 7001] gi|59798842|sp|Q7U4I0.1|RL36_SYNPX RecName: Full=50S ribosomal protein L36 gi|123581061|sp|Q3AW73.1|RL36_SYNS9 RecName: Full=50S ribosomal protein L36 gi|33633397|emb|CAE08602.1| 50S ribosomal protein L36 [Synechococcus sp. WH 8102] gi|78169836|gb|ABB26933.1| LSU ribosomal protein L36P [Synechococcus sp. CC9902] gi|87284764|gb|EAQ76716.1| Ribosomal protein L36 [Synechococcus sp. WH 5701] gi|116065803|gb|EAU71561.1| Ribosomal protein L36 [Synechococcus sp. BL107] gi|197624849|gb|EDY37408.1| ribosomal protein L36 [Cyanobium sp. PCC 7001]
SynWH7803_0424 Blast Hits [nr] ref|YP_377966.1| 50S ribosomal protein L14 [Synechococcus sp. CC9902] gi|87304029|ref|ZP_01086633.1| 50S ribosomal protein L14 [Synechococcus sp. WH 5701] gi|116072554|ref|ZP_01469820.1| 50S ribosomal protein L14 [Synechococcus sp. BL107] gi|123757083|sp|Q3AW83.1|RL14_SYNS9 RecName: Full=50S ribosomal protein L14 gi|78169826|gb|ABB26923.1| LSU ribosomal protein L14P [Synechococcus sp. CC9902] gi|87281527|gb|EAQ73563.1| 50S ribosomal protein L14 [Synechococcus sp. WH 5701] gi|116064441|gb|EAU70201.1| 50S ribosomal protein L14 [Synechococcus sp. BL107]
SynWH7803_0440 Blast Hits [nr] ref|ZP_01123388.1| hypothetical protein WH7805_06941 [Synechococcus sp. WH 7805] gi|88787916|gb|EAR19072.1| hypothetical protein WH7805_06941 [Synechococcus sp. WH 7805]
SynWH7803_0655 Blast Hits [nr] ref|ZP_01123215.1| hypothetical protein WH7805_14168 [Synechococcus sp. WH 7805] gi|88788917|gb|EAR20072.1| hypothetical protein WH7805_14168 [Synechococcus sp. WH 7805]
SynWH7803_0746 Blast Hits [nr] ref|ZP_01125072.1| histidine biosynthesis bifunctional protein HisIE [Synechococcus sp. WH 7805] gi|88786315|gb|EAR17475.1| histidine biosynthesis bifunctional protein HisIE [Synechococcus sp. WH 7805]
SynWH7803_0853 Blast Hits [nr] ref|ZP_01125189.1| hypothetical protein WH7805_00720 [Synechococcus sp. WH 7805] gi|88786432|gb|EAR17592.1| hypothetical protein WH7805_00720 [Synechococcus sp. WH 7805]
SynWH7803_1255 Blast Hits [nr] ref|ZP_01124072.1| hypothetical protein WH7805_02692 [Synechococcus sp. WH 7805] gi|88787550|gb|EAR18707.1| hypothetical protein WH7805_02692 [Synechococcus sp. WH 7805]
SynWH7803_1730 Blast Hits [nr] ref|ZP_01124639.1| 30S ribosomal protein S16 [Synechococcus sp. WH 7805] gi|88787072|gb|EAR18230.1| 30S ribosomal protein S16 [Synechococcus sp. WH 7805]
Blast Hits [pln_est] gb|BM448072|BM448072 DSA001B03_58765 An expressed sequence tag database for the halotolerant green alga, Dunaliella salina Dunaliella salina cDNA clone DSA001B03 5, mRNA sequence.
SynWH7803_1891 Blast Hits [nr] ref|ZP_01123072.1| hypothetical protein WH7805_13453 [Synechococcus sp. WH 7805] gi|88788774|gb|EAR19929.1| hypothetical protein WH7805_13453 [Synechococcus sp. WH 7805]
SynWH7803_2235 Blast Hits [nr] ref|ZP_01081040.1| hypothetical protein RS9917_07250 [Synechococcus sp. RS9917] gi|86166963|gb|EAQ68224.1| hypothetical protein RS9917_07250 [Synechococcus sp. RS9917]
SynWH7803_0117 Blast Hits [sprot] PQQE_KLEP7 (sp|A6T9H2) Coenzyme PQQ synthesis protein E OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=pqqE PE=3 SV=1
SynWH7803_0301 Blast Hits [sprot] Y729_SYNY3 (sp|P72673) Thylakoid-associated protein slr0729 OS=Synechocystis sp. (strain PCC 6803) GN=slr0729 PE=4 SV=1
SynWH7803_0663 Blast Hits [sprot] YRKJ_BACSU (sp|P54437) UPF0721 transmembrane protein yrkJ OS=Bacillus subtilis GN=yrkJ PE=3 SV=1
SynWH7803_0712 Blast Hits [sprot] BETA_KLEP7 (sp|A6T613) Choline dehydrogenase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=betA PE=3 SV=1
SynWH7803_0861 Blast Hits [sprot] LSRG_KLEP7 (sp|A6TEB3) Autoinducer 2-degrading protein lsrG OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=lsrG PE=3 SV=1
SynWH7803_0919 Blast Hits [sprot] Y441_METJA (sp|Q57883) UPF0721 transmembrane protein MJ0441 OS=Methanocaldococcus jannaschii GN=MJ0441 PE=3 SV=1
SynWH7803_1597 Blast Hits [sprot] TRMJ_KLEP7 (sp|A6TCF3) tRNA (cytidine/uridine-2'-O-)-methyltransferase trmJ OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=trmJ PE=3 SV=1
SynWH7803_0343 Blast Hits [pln_est] dbj|DW072980|DW072980 CLLZ4375.b1_N13.ab1 CLL(XYZ) lettuce saligna Lactuca saligna cDNA clone CLLZ4375, mRNA sequence.
SynWH7803_0417 Blast Hits [pln_est] gb|GW070723|GW070723 CCUX5188.b1 CCUX Fragilariopsis cylindrus pooled RNA Fragilariopsis cylindrus cDNA clone CCUX5188 5', mRNA sequence.
SynWH7803_0578 Blast Hits [pln_est] gb|GR072341|GR072341 CCIF10242.b1 CCIF Mimulus guttatus IM62 leaves (H) Mimulus guttatus cDNA clone CCIF10242 5', mRNA sequence.
SynWH7803_0685 Blast Hits [pln_est] gb|CX051072|CX051072 UCRCS09_36D02_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-36D02-G3-1-5.g, mRNA sequence.
SynWH7803_0686 Blast Hits [pln_est] gb|CX050728|CX050728 UCRCS09_34B12_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-34B12-D23-1-5.g, mRNA sequence.
SynWH7803_0772 Blast Hits [pln_est] gb|CX050728|CX050728 UCRCS09_34B12_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-34B12-D23-1-5.g, mRNA sequence.
SynWH7803_1074 Blast Hits [pln_est] gb|FP072896|FP072896 FP072896 LG0AAD Quercus robur cDNA clone LG0AAD15YE18RM1, mRNA sequence.
SynWH7803_1099 Blast Hits [pln_est] gb|FG607261|FG607261 stem_S020_G06.SEQ Opium poppy stem cDNA library Papaver somniferum cDNA, mRNA sequence.
SynWH7803_1450 Blast Hits [pln_est] dbj|EY763742|EY763742 CR05-C1-100-072-B08-CT.F Mandarin leaf, greenhouse plant Citrus reticulata cDNA, mRNA sequence.
SynWH7803_1468 Blast Hits [pln_est] gb|CV092842|CV092842 FAMU_USDA_FP_865 Vitis shuttleworthii L., grape Vitis shuttleworthii cDNA clone JLVs072_E04 5', mRNA sequence.
SynWH7803_1754 Blast Hits [pln_est] dbj|DV159814|DV159814 KP1B.101H09F.050722T7 KP1B Nicotiana tabacum cDNA clone KP1B.101H09, mRNA sequence.
SynWH7803_2020 Blast Hits [pln_est] gb|GW231971|GW231971 CBOZ10721.b1 CBOZ Coccomyxa sp. C-169 8kb Coccomyxa sp. C-169 cDNA clone CBOZ10721 5', mRNA sequence.
SynWH7803_2055 Blast Hits [pln_est] dbj|EG716470|EG716470 GTE00007269 Guillardia theta non-normalised Guillardia theta cDNA, mRNA sequence.
SynWH7803_2280 Blast Hits [pln_est] gb|CX050728|CX050728 UCRCS09_34B12_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-34B12-D23-1-5.g, mRNA sequence.
SynWH7803_2336 Blast Hits [pln_est] dbj|DV161405|DV161405 KP1B.108A05F.050726T7 KP1B Nicotiana tabacum cDNA clone KP1B.108A05, mRNA sequence.
SynWH7803_2345 Blast Hits [pln_est] gb|FP042072|FP042072 FP042072 LG0AAC Quercus petraea cDNA clone LG0AAC7YK14RM1, mRNA sequence.
SynWH7803_2349 Blast Hits [pln_est] dbj|EX407246|EX407246 GQ03518.B7_C02 GQ035 - Needles - End of season Picea glauca cDNA clone GQ03518_C02 5', mRNA sequence.
SynWH7803_2420 Blast Hits [pln_est] dbj|DV161695|DV161695 KP1B.108O12F.050726T7 KP1B Nicotiana tabacum cDNA clone KP1B.108O12, mRNA sequence.
SynWH7803_0006 Blast Hits [TAIR_pep] AT3G04240.1 | Symbols: SEC | SEC (secret agent); transferase, transferring glycosyl groups | chr3:1114187-1120722 REVERSE
SynWH7803_0186 Blast Hits [TAIR_pep] AT3G04240.1 | Symbols: SEC | SEC (secret agent); transferase, transferring glycosyl groups | chr3:1114187-1120722 REVERSE
SynWH7803_0290 Blast Hits [TAIR_pep] AT5G10720.1 | Symbols: AHK5, CKI2 | AHK5 (ARABIDOPSIS HISTIDINE KINASE 5); protein histidine kinase | chr5:3386835-3390541 FORWARD
SynWH7803_0491 Blast Hits [TAIR_pep] AT1G55250.1 | Symbols: HUB2 | HUB2 (HISTONE MONO-UBIQUITINATION 2); protein binding / zinc ion binding | chr1:20607214-20612302 FORWARD
SynWH7803_0533 Blast Hits [TAIR_pep] ATCG00720.1 | Symbols: PETB | Encodes the cytochrome b(6) subunit of the cytochrome b6f complex. | chrC:74841-76292 FORWARD
SynWH7803_0631 Blast Hits [TAIR_pep] AT5G60750.1 | Symbols: | CAAX amino terminal protease family protein | chr5:24431072-24433199 FORWARD
SynWH7803_0649 Blast Hits [TAIR_pep] AT4G30720.1 | Symbols: | electron carrier/ oxidoreductase | chr4:14972212-14975461 REVERSE
SynWH7803_0658 Blast Hits [TAIR_pep] AT3G07270.2 | Symbols: | GTP cyclohydrolase I | chr3:2314005-2317059 FORWARD
SynWH7803_0741 Blast Hits [TAIR_pep] AT4G19925.1 | Symbols: | disease resistance protein (TIR class), putative | chr4:10799875-10800726 REVERSE
SynWH7803_0830 Blast Hits [TAIR_pep] AT5G07260.1 | Symbols: | homeobox protein-related | chr5:2278058-2280091 FORWARD
SynWH7803_0959 Blast Hits [TAIR_pep] AT4G20720.1 | Symbols: | dentin sialophosphoprotein-related | chr4:11105409-11107841 FORWARD
SynWH7803_1176 Blast Hits [TAIR_pep] AT4G02725.1 | Symbols: | unknown protein | chr4:1206055-1207290 FORWARD
SynWH7803_1488 Blast Hits [TAIR_pep] AT5G08400.1 | Symbols: | unknown protein | chr5:2707225-2708911 REVERSE
SynWH7803_1509 Blast Hits [TAIR_pep] AT5G47010.1 | Symbols: UPF1, LBA1, ATUPF1 | LBA1 (LOW-LEVEL BETA-AMYLASE 1); ATP binding / DNA binding / RNA helicase/ hydrolase | chr5:19072009-19078856 FORWARD
SynWH7803_1558 Blast Hits [TAIR_pep] AT5G10720.1 | Symbols: AHK5, CKI2 | AHK5 (ARABIDOPSIS HISTIDINE KINASE 5); protein histidine kinase | chr5:3386835-3390541 FORWARD
SynWH7803_1650 Blast Hits [TAIR_pep] AT5G60750.1 | Symbols: | CAAX amino terminal protease family protein | chr5:24431072-24433199 FORWARD
SynWH7803_1676 Blast Hits [TAIR_pep] AT2G07280.1 | Symbols: | unknown protein | chr2:3026398-3029074 FORWARD
SynWH7803_1696 Blast Hits [TAIR_pep] AT5G08400.2 | Symbols: | unknown protein | chr5:2707225-2708911 REVERSE
SynWH7803_1786 Blast Hits [TAIR_pep] AT5G10720.1 | Symbols: AHK5, CKI2 | AHK5 (ARABIDOPSIS HISTIDINE KINASE 5); protein histidine kinase | chr5:3386835-3390541 FORWARD
SynWH7803_1794 Blast Hits [TAIR_pep] AT5G10720.1 | Symbols: AHK5, CKI2 | AHK5 (ARABIDOPSIS HISTIDINE KINASE 5); protein histidine kinase | chr5:3386835-3390541 FORWARD
SynWH7803_1864 Blast Hits [TAIR_pep] AT1G07250.1 | Symbols: UGT71C4 | UGT71C4 (UDP-GLUCOSYL TRANSFERASE 71C4); quercetin 3-O-glucosyltransferase/ quercetin 7-O-glucosyltransferase/ transferase, transferring glycosyl groups | chr1:2225963-2227402 FORWARD
SynWH7803_1940 Blast Hits [TAIR_pep] AT3G04240.1 | Symbols: SEC | SEC (secret agent); transferase, transferring glycosyl groups | chr3:1114187-1120722 REVERSE
SynWH7803_1992 Blast Hits [TAIR_pep] AT1G24460.1 | Symbols: | unknown protein | chr1:8666072-8672338 FORWARD
SynWH7803_1999 Blast Hits [TAIR_pep] AT5G20720.2 | Symbols: CPN20, CPN10, CHCPN10, ATCPN21, CPN21 | CPN20 (CHAPERONIN 20); calmodulin binding | chr5:7015015-7016354 FORWARD
SynWH7803_2039 Blast Hits [TAIR_pep] AT5G50950.2 | Symbols: | fumarate hydratase, putative / fumarase, putative | chr5:20729687-20733636 FORWARD
SynWH7803_2220 Blast Hits [TAIR_pep] AT3G04240.1 | Symbols: SEC | SEC (secret agent); transferase, transferring glycosyl groups | chr3:1114187-1120722 REVERSE
SynWH7803_2234 Blast Hits [TAIR_pep] AT3G59760.3 | Symbols: OASC, ATCS-C | OASC (O-ACETYLSERINE (THIOL) LYASE ISOFORM C); ATP binding / cysteine synthase | chr3:22072668-22075345 REVERSE

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Gene set by search TXT
ColumnDescription and example
1Data Source Namec.f. Synechocystis
2Gene IDc.f. slr1311
3Category nameone of gene_symbol, gi_gname, definition, function, goterm, interpro, blast_hits and 'Gene and Mutants'.
4DescriptionFree text
SET
ColumnDescription and example
1Gene IDc.f. slr1311
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