cyanobase » Prochlorococcus marinus str. MIT 9215 » genes » P9215_19611

GeneView: P9215_19611

GFF3

GeneAnnotation

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ID P9215_19611
Type protein_coding_gene
Gene symbol
aspS
Gene symbolExtracted from literature
Gene product

Aspartyl-tRNA synthetase

Gene productExtracted from literature
Functional category
Gene Ontology
[IEA]
ipr2go
  • Biological Process: aspartyl-tRNA aminoacylation (GO:0006422 External)
  • Biological Process: tRNA aminoacylation for protein translation (GO:0006418 External)
  • Biological Process: translation (GO:0006412 External)
  • Cellular Component: cytoplasm (GO:0005737 External)
  • Molecular Function: ATP binding (GO:0005524 External)
  • Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812 External)
  • Molecular Function: aspartate-tRNA ligase activity (GO:0004815 External)
  • Molecular Function: ligase activity (GO:0016874 External)
  • Molecular Function: nucleic acid binding (GO:0003676 External)
  • Molecular Function: nucleotide binding (GO:0000166 External)

Genomic context

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Location Chr:1702164..1703960
Strand direct
Genomic context

Transcript

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Nucleotide sequence
FNA
Length1797 nt
Sequence retrieving

Peptide

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Translated sequence
FAA
Length598 AA.

Protein families, domains and functional sites

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Graphical view by InterProScan External
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PNG
Table view by InterProScan External
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TableView
GFF3

Mutants

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Homology search results (Blast2)

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CyanoBase Ortholog table (blast reciprocal best hit pairs)

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References

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External links

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API

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Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
  • /cyanobase/GCA_000018065.1/orthologs/P9215_19611.gff3 -- GFF3.
  • InterProScan matches

    MicrobeBase