cyanobase » Synechocystis sp. PCC 6803 » genes » slr1225

GeneView: slr1225

GFF3

GeneAnnotation

? | +/- | Top
ID slr1225
Type protein_coding_gene
Gene symbol
Gene symbolExtracted from literature
spkF, pknF
Gene product

serine/threonine kinase

Gene productExtracted from literature
Functional category
Gene Ontology
[IEA]
ipr2go
  • Biological Process: protein amino acid phosphorylation (GO:0006468 External)
  • Molecular Function: ATP binding (GO:0005524 External)
  • Molecular Function: protein kinase activity (GO:0004672 External)

Genomic context

? | +/- | Top
Location Chr:1027844..1029331
Strand direct
Genomic context

Transcript

? | +/- | Top
Nucleotide sequence
FNA
Length1488 nt
Sequence retrieving

Peptide

? | +/- | Top
Translated sequence
FAA
Length495 AA.

Protein families, domains and functional sites

? | +/- | Top
Graphical view by InterProScan External
show/hide
PNG
Table view by InterProScan External
show/hide
TableView
GFF3

Mutants

? | +/- | Top
Gene: pknF
Genes and Mutantsposted by Masahiko Ikeuchi <mikeuchi at mail.ims.u-tokyo.ac.jp> at 1999-09-17
GeneNamepknF
GeneticBackgroundPCC
DNAno
DrugMarkerKm-F
AdditionalInformationReference to Hironori Fujita and Masahiko Ikeuchi. Department of Life Sciences (Biology). University of Tokyo. Komaba 3-8-1, Meguro, Tokyo 153-8902 Japan. Phone/Fax 81-5454-6641/81-5454-4337
Gene: spkF
Genes and Mutantsposted by Masahiko Ikeuchi <mikeuchi at bio.c.u-tokyo.ac.jp> at 2005-04-11
GeneNamespkF
GeneticBackgroundNot examined
DNAno
Medline12732981, 12168951, 11160079

Homology search results (Blast2)

? | +/- | Top
show/hide TableView GFF3

CyanoBase Ortholog table (blast reciprocal best hit pairs)

? | +/- | Top
show/hide TableView GFF3

References

? | +/- | Top

External links

? | +/- | Top

API

? | +/- | Top
Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
  • /cyanobase/GCA_000009725.1/orthologs/slr1225.gff3 -- GFF3.
  • InterProScan matches

    MicrobeBase