cyanobase » Synechocystis sp. PCC 6803 » genes » slr1212

GeneView: slr1212

GFF3

GeneAnnotation

? | +/- | Top
ID slr1212
Type protein_coding_gene
Gene symbol
Gene symbolExtracted from literature
ETR1, uirS, slr1212, pixA
Gene product

similar to two-component sensor histidine kinase

Gene productExtracted from literature
UirS, Slr1212, SySlr1212, PixA, photoreceptor histidine kinase
Functional category
Gene Ontology
[IEA]
ipr2go
  • Biological Process: peptidyl-histidine phosphorylation (GO:0018106 External)
  • Biological Process: protein-chromophore linkage (GO:0018298 External)
  • Biological Process: regulation of transcription (GO:0045449 External)
  • Biological Process: regulation of transcription, DNA-dependent (GO:0006355 External)
  • Biological Process: sensory perception (GO:0007600 External)
  • Biological Process: signal transduction (GO:0007165 External)
  • Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160 External)
  • Molecular Function: ATP binding (GO:0005524 External)
  • Molecular Function: G-protein coupled photoreceptor activity (GO:0008020 External)
  • Molecular Function: protein histidine kinase activity (GO:0004673 External)
  • Molecular Function: signal transducer activity (GO:0004871 External)
  • Molecular Function: two-component sensor activity (GO:0000155 External)

Genomic context

? | +/- | Top
Location Chr:897354..899888
Strand direct
Genomic context

Transcript

? | +/- | Top
Nucleotide sequence
FNA
Length2535 nt
Sequence retrieving

Peptide

? | +/- | Top
Translated sequence
FAA
Length844 AA.

Protein families, domains and functional sites

? | +/- | Top
Graphical view by InterProScan External
show/hide
PNG
Table view by InterProScan External
show/hide
TableView
GFF3

Mutants

? | +/- | Top
Gene: ETR1
Genes and Mutantsposted by Masahiko Ikeuchi <mikeuchi at mail.ims.u-tokyo.ac.jp> at 1999-09-17
GeneNameETR1
ProductNameethylene response sensor protein (ETR1)
GeneticBackgroundPCC
DNAno
DrugMarkerKm-F
AdditionalInformationReference to Hironori Fujita and Masahiko Ikeuchi. Department of Life Sciences (Biology). University of Tokyo. Komaba 3-8-1, Meguro, Tokyo 153-8902 Japan. Phone/Fax 81-5454-6641/81-5454-4337
Mutant: Δhik44
Genes and Mutantsposted by Iwane Suzuki <iwanes6803 at biol.tsukuba.ac.jp> at 2007-11-01
MutantNameΔhik44
GeneNamehik44
ProductNamehistidine kinase44, Hik44
GeneticBackgroundGT
DrugDirectionFw
DrugMarkerSp-r
AdditionalInformationSmaI, 897908

Homology search results (Blast2)

? | +/- | Top
show/hide TableView GFF3

CyanoBase Ortholog table (blast reciprocal best hit pairs)

? | +/- | Top
show/hide TableView GFF3

References

? | +/- | Top

External links

? | +/- | Top

API

? | +/- | Top
Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
  • /cyanobase/GCA_000009725.1/orthologs/slr1212.gff3 -- GFF3.
  • InterProScan matches

    MicrobeBase