cyanobase » Synechocystis sp. PCC 6803 » genes » sll1003

GeneView: sll1003

GFF3

GeneAnnotation

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ID sll1003
Type protein_coding_gene
Gene symbol
hik13
Gene symbolExtracted from literature
hik13
Gene product

two-component sensor histidine kinase

Gene productExtracted from literature
Sll1003
Functional category
Gene Ontology
[IEA]
ipr2go
  • Biological Process: peptidyl-histidine phosphorylation (GO:0018106 External)
  • Biological Process: phosphorylation (GO:0016310 External)
  • Biological Process: regulation of transcription, DNA-dependent (GO:0006355 External)
  • Biological Process: signal transduction (GO:0007165 External)
  • Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160 External)
  • Cellular Component: membrane (GO:0016020 External)
  • Molecular Function: ATP binding (GO:0005524 External)
  • Molecular Function: protein histidine kinase activity (GO:0004673 External)
  • Molecular Function: signal transducer activity (GO:0004871 External)
  • Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772 External)
  • Molecular Function: two-component sensor activity (GO:0000155 External)

Genomic context

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Location Chr:518287..520272
Strand complement
Genomic context

Transcript

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Nucleotide sequence
FNA
Length1986 nt
Sequence retrieving

Peptide

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Translated sequence
FAA
Length661 AA.

Protein families, domains and functional sites

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Graphical view by InterProScan External
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PNG
Table view by InterProScan External
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TableView
GFF3

Mutants

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Gene: Hik13
Genes and Mutantsposted by Hiroshi Yamamoto <hiroc at nibb.ac.jp> at 2002-11-13
GeneNameHik13
GeneticBackgroundGT
DNAno
DrugDirectionRv
DrugMarkerCm-r
AdditionalInformationCm-r Ins. site: BglII. Cm-r Ins. position: 519199. Product reference: H. Yamamoto et al. and N. Murata
Mutant: Δhik13
Genes and Mutantsposted by Iwane Suzuki <iwanes6803 at biol.tsukuba.ac.jp> at 2007-11-01
MutantNameΔhik13
GeneNamehik13
ProductNamehistidine kinase13, Hik13
GeneticBackgroundGT
DrugDirectionFw
DrugMarkerKm-r
AdditionalInformationHindIII, 519284

Homology search results (Blast2)

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show/hide TableView GFF3

CyanoBase Ortholog table (blast reciprocal best hit pairs)

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show/hide TableView GFF3

References

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External links

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API

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Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
  • /cyanobase/GCA_000009725.1/orthologs/sll1003.gff3 -- GFF3.
  • InterProScan matches

    MicrobeBase