cyanobase » Anabaena sp. PCC 7120 » genes » alr2515

GeneView: alr2515

GFF3

GeneAnnotation

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ID alr2515
Type protein_coding_gene
Gene symbol
coxA
Gene symbolExtracted from literature
coxA2, coxAII, coax-II
Gene product

cytochrome c oxidase subunit I

Gene productExtracted from literature
Functional category Respiratory terminal oxidases
Gene Ontology
[IEA]
ipr2go

Genomic context

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Location Chr:3022214..3023893 External
Strand direct
Genomic context

GenomeView External

GenomeView (old) External

Transcript

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Nucleotide sequence
FNA
Length1680 nt
Sequence retrieving

Peptide

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Translated sequence
FAA
Length559 AA.

Protein families, domains and functional sites

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Graphical view by InterProScan External
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PNG
Anabaena:alr2515
Table view by InterProScan External
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TableView
GFF3
Transmembrane regions predicted by SOSUI
 FromToLength(A.A.)
Transmembrane segments 51 73 22
95 117 22
130 152 22
173 195 22
215 237 22
267 289 22
299 321 22
330 352 22
362 384 22
399 421 22
475 497 22

Mutants

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Homology search results (Blast2)

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CyanoBase Ortholog table (blast reciprocal best hit pairs)

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Geneset

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Variation

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References

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External links

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Sequence databases
Gene annotation databases
Protein databases
3D structure databases
Ortholog/paralog cluster databases
  • COG alr2515 External -- Phylogenetic classification of ortholog.
  • MBGD ana:alr2515 External -- The automated construction of orthologous groups.
  • Gclust *alr2515* External -- trans-kingdom classification of proteins.
Phenotype database

API

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Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
InterProScan matches

CyanoBase

Kazusa DNA Research Institute

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