cyanobase » Anabaena sp. PCC 7120 » genes » alr0610

GeneView: alr0610

GFF3

GeneAnnotation

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ID alr0610
Type protein_coding_gene
Gene symbol
nrtC
Gene symbolExtracted from literature
nrtC, alr0610
Gene product

nitrate transport ATP-binding protein NrtC

Gene productExtracted from literature
ABC-type permease for nitrate and nitrite, multicomponent transporter, multicomponent transportion, ABC-type nitrate/nitrite uptake transporter, NrtC, nitrate permease
Functional category Glutamate family / Nitrogen assimilation
Gene Ontology
[IEA]
ipr2go
  • Biological Process: nitrate transport (GO:0015706 External)
  • Cellular Component: membrane (GO:0016020 External)
  • Molecular Function: ATP binding (GO:0005524 External)
  • Molecular Function: ATPase activity (GO:0016887 External)
  • Molecular Function: nitrate transmembrane transporter activity (GO:0015112 External)
  • Molecular Function: nucleoside-triphosphatase activity (GO:0017111 External)
  • Molecular Function: nucleotide binding (GO:0000166 External)

Genomic context

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Location Chr:708712..710685 External
Strand direct
Genomic context

GenomeView External

GenomeView (old) External

Transcript

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Nucleotide sequence
FNA
Length1974 nt
Sequence retrieving

Peptide

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Translated sequence
FAA
Length657 AA.

Protein families, domains and functional sites

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Graphical view by InterProScan External
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PNG
Anabaena:alr0610
Table view by InterProScan External
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TableView
GFF3
Transmembrane regions predicted by SOSUI
Not detected.

Mutants

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Homology search results (Blast2)

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show/hide TableView GFF3

CyanoBase Ortholog table (blast reciprocal best hit pairs)

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show/hide TableView GFF3

Geneset

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Variation

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References

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External links

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Sequence databases
Gene annotation databases
Protein databases
3D structure databases
Ortholog/paralog cluster databases
  • COG alr0610 External -- Phylogenetic classification of ortholog.
  • MBGD ana:alr0610 External -- The automated construction of orthologous groups.
  • Gclust *alr0610* External -- trans-kingdom classification of proteins.
Phenotype database

API

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Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
InterProScan matches

CyanoBase

Kazusa DNA Research Institute

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