cyanobase » Anabaena sp. PCC 7120 » genes » all4023

GeneView: all4023

GFF3

GeneAnnotation

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ID all4023
Type protein_coding_gene
Gene symbol
Gene symbolExtracted from literature
cydB
Gene product

cytochrome D ubiquinol oxidase chain II

Gene productExtracted from literature
Functional category Nitrogen fixation
Gene Ontology
[IEA]
ipr2go

Genomic context

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Location Chr:4844455..4845495 External
Strand complement
Genomic context

GenomeView External

GenomeView (old) External

Transcript

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Nucleotide sequence
FNA
Length1041 nt
Sequence retrieving

Peptide

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Translated sequence
FAA
Length346 AA.

Protein families, domains and functional sites

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Graphical view by InterProScan External
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PNG
Anabaena:all4023
Table view by InterProScan External
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TableView
GFF3
Transmembrane regions predicted by SOSUI
 FromToLength(A.A.)
Transmembrane segments 19 41 22
59 81 22
93 115 22
127 149 22
168 190 22
207 229 22
239 261 22
274 296 22
307 329 22

Mutants

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Homology search results (Blast2)

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CyanoBase Ortholog table (blast reciprocal best hit pairs)

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Geneset

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Variation

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References

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External links

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Sequence databases
Gene annotation databases
Protein databases
3D structure databases
Ortholog/paralog cluster databases
  • COG all4023 External -- Phylogenetic classification of ortholog.
  • MBGD ana:all4023 External -- The automated construction of orthologous groups.
  • Gclust *all4023* External -- trans-kingdom classification of proteins.
Phenotype database

API

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Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
InterProScan matches

CyanoBase

Kazusa DNA Research Institute

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