RhizoBase Similarity Search (Genomes)
Enter Query Sequence
BLASTN - search genome DNA sequence(s) using nucleotide query.
TBLASTN - search translated genome DNA sequence(s) using a protein query.
Expectation value (E)
The statistical significance threshold for reporting matches against database sequences. Lower EXPECT thresholds are more stringent. (Example for higher stringency: 1E-5 or 1E-100, lower stringency: 100 or 1000) (-e)
Filter query sequence
(DUST with blastn, SEG with others)
Number of database sequences to show one-line descriptions for (V)
Number of database sequence to show alignments for (B)
Show input data if checked
(*) Sequences collected from Genbank
This database is compiled from sequences of bacteria to be of 3 Family (
) and of 5 Genus (
), containing the
A Kazusa API service by Kazusa DNA Research Institute