cyanobase / GCA_001277295.1 - AA650

BLASTP 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= AA650_17280 cysteine desulfurase (382 letters) Database: GCA_000952155.1P 4367 sequences; 1,296,044 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UH38_15815 cysteine desulfurase 274 7e-89 UH38_17005 cysteine desulfurase 82 5e-18 UH38_01870 cysteine lyase 47 1e-06 UH38_18285 alanine--glyoxylate aminotransferase 39 6e-04 C184bd983043c27a5e826549454e53bc

>UH38_15815 cysteine desulfurase Length = 388 Score = 274 bits (701), Expect = 7e-89, Method: Compositional matrix adjust. Identities = 160/373 (42%), Positives = 230/373 (61%), Gaps = 13/373 (3%) Query: 3 VYLDYSATTPTRPEAIAIIQTILTQQWGNPSSL-HEWGNRAALILETARMQVAGLINAVP 61 +YLD +TTP + + TQ +GNPSS+ H +G A ++ AR +AG INA Sbjct: 6 IYLDCHSTTPVDERVLTAMLPFFTQHFGNPSSINHVYGWEAEAAVKQARTTLAGAINASI 65 Query: 62 ESIIFTSGGTEADNLAIMGVARCYTTP-QHMIISSVEHSAISEPAKMLENWGWEITRLGV 120 E I+FTSG TEA+NLAI GVA Y + QH+I EHSA+ +P K L + G+E+T L V Sbjct: 66 EEIVFTSGATEANNLAIKGVAEAYFSKGQHIITVETEHSAVIDPCKYLRSLGFEVTVLPV 125 Query: 121 NHQGRVNPEDLKAALRHNTVLVSVIYGQSEIGTVQPIAELGKITKTHGALFHTDAVQVAG 180 G ++ L+ ALR T+LVSV+ +EIG +QP+AE+G + + LFHTDA Q G Sbjct: 126 QKDGLLDLNQLEKALRPETILVSVMAANNEIGVLQPLAEIGALCRAREVLFHTDAAQAIG 185 Query: 181 RLPLDVQTLPVDLLSLSSHKLYGGLGAGALYLR---PGVELMPLLGGGGQENGLRSGTQA 237 ++PLDV+ + +DLLS+++HK+YG G G LY+R P V++ P L GGGQE G+RSGT Sbjct: 186 KIPLDVEAMKIDLLSMTAHKVYGPKGIGVLYVRRRHPRVQMSPQLHGGGQERGMRSGTLY 245 Query: 238 TPAIAGFGVAAELAAQELETETGRLILLRDRLFAILADVPGLIPTGDKIHRLPHHLSFYL 297 P I GF A E+A EL+ E+ RLI LR +L+ L+ + G+ G RLP +L+ + Sbjct: 246 PPQIVGFAKAVEIALAELDAESQRLIQLRQQLWQQLSQLDGIYLNGHPTLRLPGNLNISV 305 Query: 298 EAADGEKISGKTLVRQLNLAGI-GISAGAACNSGKLSPSPILLAMGYSQKAALGGIRLTL 356 E DG + L L + +S+GAAC+S +PS +L A+G+S+K A +R + Sbjct: 306 EGVDGAAL-------LLGLQPVMAVSSGAACSSQATAPSRVLTALGHSEKLAYASVRFGM 358 Query: 357 GKQTTAADIDWTG 369 G+ +AA+I+ G Sbjct: 359 GRFNSAAEIERVG 371 >UH38_17005 cysteine desulfurase Length = 420 Score = 82.0 bits (201), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 76/257 (29%), Positives = 114/257 (44%), Gaps = 17/257 (6%) Query: 3 VYLDYSATTPTRPEAIAIIQTILTQQWGNPSS-LHEWGNRAALILETARMQVAGLINAVP 61 VYLD +AT+ + ++ Q N +H +A E AR +VA I A Sbjct: 30 VYLDNAATSQKPLLVLNTLKDYYEQYNSNVHRGVHTLSAKATDAYEGARDKVAAFIKAAS 89 Query: 62 -ESIIFTSGGTEADNLAIMGVARCYTTP-QHMIISSVEHSAISEPAKML-ENWGWEITRL 118 + I+FT TEA NL +++S +EH + P ++L + G + + Sbjct: 90 RQEIVFTRNATEAINLVAYSWGNSNLKAGDEIVLSVMEHHSNLIPWQLLAQRTGAVLKFV 149 Query: 119 GVNHQGRVNPEDLKAALRHNTVLVSVIYGQSEIGTVQPIAELGKITKTHGALFHTDAVQV 178 + + E K+ + T LV+V++ + +G + PIAE+ I GA DA Q Sbjct: 150 ELTETEEFDLEQFKSLVSEKTKLVAVVHVSNTLGCINPIAEITAIAHQFGAKVLLDACQS 209 Query: 179 AGRLPLDVQTLPVDLLSLSSHKLYGGLGAGALYLRPGV--ELMPLLGGGGQ--ENGLRSG 234 +P+DVQ L D L S HK+ G G LY + + + P LGGG + L S Sbjct: 210 VPHMPIDVQKLDCDWLVASGHKMCAPTGIGFLYGKLDLLRSMPPFLGGGEMIADVYLDSA 269 Query: 235 TQA---------TPAIA 242 T A TPAIA Sbjct: 270 TYADLPHKFEAGTPAIA 286 >UH38_01870 cysteine lyase Length = 393 Score = 47.0 bits (110), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 55/225 (24%), Positives = 89/225 (39%), Gaps = 27/225 (12%) Query: 46 LETARMQVAGLINAVPESIIFTSGGTEADNLAIMGVARCYTTPQHMIISSVEHSAISEPA 105 +E R +A +N ++I T T N+ + G+ + ++++ EH I A Sbjct: 67 VEETRNAIASELNTPSDTITLTEDVTVGCNITLWGID--WQQGDRILLTDCEHPGIIATA 124 Query: 106 KML-ENWGWEITRLGVNHQGRVNPED----LKAALRHNTVLVSVIYGQSEIGTVQPIAEL 160 + + +G E+ + +N D + L T LV + + G V + ++ Sbjct: 125 REIGRRFGVELDTCPI--MATLNAGDPAQVIDQYLTSRTRLVVLSHLLWNTGQVLTLDKI 182 Query: 161 GKITKTHGALFHTDAVQVAGRLPLDVQTLPVDLLSLSSHKLYGG-LGAGALYLRPGVE-- 217 ++ K DA Q G LPL++ L VD + + HK + G G G LY+ P Sbjct: 183 VQVCKQANVRILADAAQSVGCLPLNLADLGVDFYAFTGHKWWCGPAGVGGLYVHPEARAS 242 Query: 218 LMPLLGG-------------GGQENGLRS--GTQATPAIAGFGVA 247 L P G G Q +G R T A P AG A Sbjct: 243 LQPTFIGWRGITVDNRGNPTGWQPDGRRYEVATSAYPQYAGLRAA 287 >UH38_18285 alanine--glyoxylate aminotransferase Length = 382 Score = 38.5 bits (88), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 4/79 (5%) Query: 130 DLKAALR-HNTVLVSVIYGQSEIGTVQPIAELGKITKTHGALFHTDAVQVAGRLPLDVQT 188 +L+ AL H ++++++ ++ G QPI +G + + G L D V G +P+ + T Sbjct: 138 ELRTALETHRPAILALVHAETSTGARQPIDGVGDLCREFGCLLLLDTVTSLGGVPIFLDT 197 Query: 189 LPVDLLSLSSHKLYGGLGA 207 VDL S K GLG Sbjct: 198 WGVDLAYSCSQK---GLGC 213 Database: GCA_000952155.1P Posted date: Aug 27, 2016 10:32 PM Number of letters in database: 1,296,044 Number of sequences in database: 4367 Lambda K H 0.318 0.135 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4367 Number of Hits to DB: 982,673 Number of extensions: 41853 Number of successful extensions: 145 Number of sequences better than 1.0: 5 Number of HSP's gapped: 141 Number of HSP's successfully gapped: 5 Length of query: 382 Length of database: 1,296,044 Length adjustment: 85 Effective length of query: 297 Effective length of database: 924,849 Effective search space: 274680153 Effective search space used: 274680153 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 57 (26.6 bits)