BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= AA650_17280 cysteine desulfurase
(382 letters)
Database: GCA_000934435.1P
5950 sequences; 1,718,357 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SP67_06455 cysteine desulfurase 615 0.0
SP67_06445 cysteine desulfurase 615 0.0
SP67_12095 cysteine desulfurase 273 2e-88
SP67_30830 hypothetical protein 177 1e-51
SP67_03040 cysteine desulfurase 132 4e-37
SP67_26615 alanine--glyoxylate aminotransferase 35 0.007
SP67_16185 cysteine desulfurase 33 0.024
SP67_23240 glycine dehydrogenase 30 0.32
>SP67_06455 cysteine desulfurase
Length = 392
Score = 615 bits (1587), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 293/380 (77%), Positives = 335/380 (88%)
Query: 1 MQVYLDYSATTPTRPEAIAIIQTILTQQWGNPSSLHEWGNRAALILETARMQVAGLINAV 60
MQ+YLDYSATTPTR EAIA +QT+LTQQWGNPSSLHEWG RAA +LE ARMQ+AGLINA
Sbjct: 1 MQIYLDYSATTPTRQEAIATMQTVLTQQWGNPSSLHEWGQRAATVLEQARMQIAGLINAS 60
Query: 61 PESIIFTSGGTEADNLAIMGVARCYTTPQHMIISSVEHSAISEPAKMLENWGWEITRLGV 120
ESIIFTSGGTEADNLAIMG+AR Y PQH+IISSVEHSAISEPA++LE GWE+TRL V
Sbjct: 61 AESIIFTSGGTEADNLAIMGIARLYRQPQHIIISSVEHSAISEPARLLEQSGWEVTRLCV 120
Query: 121 NHQGRVNPEDLKAALRHNTVLVSVIYGQSEIGTVQPIAELGKITKTHGALFHTDAVQVAG 180
NHQG+VNP DLKAAL+ NTVLVS+IYGQSE+GT+QPIAELGKI ++ G LFHTDAVQ+AG
Sbjct: 121 NHQGKVNPLDLKAALQDNTVLVSIIYGQSEVGTIQPIAELGKIARSAGVLFHTDAVQLAG 180
Query: 181 RLPLDVQTLPVDLLSLSSHKLYGGLGAGALYLRPGVELMPLLGGGGQENGLRSGTQATPA 240
RLPL+VQ LPVDLLS+SSHK+YG GAGALY+RPGVEL+P+LGGGGQE RSGTQA P
Sbjct: 181 RLPLNVQNLPVDLLSISSHKIYGPQGAGALYVRPGVELVPILGGGGQEQRSRSGTQAVPV 240
Query: 241 IAGFGVAAELAAQELETETGRLILLRDRLFAILADVPGLIPTGDKIHRLPHHLSFYLEAA 300
IAGFGVAAELAAQE+ TET RL+ LRDRLF+ L DVPGLIPTGD + RLPHH+SF LE A
Sbjct: 241 IAGFGVAAELAAQEMATETPRLMQLRDRLFSQLTDVPGLIPTGDLVDRLPHHVSFCLEHA 300
Query: 301 DGEKISGKTLVRQLNLAGIGISAGAACNSGKLSPSPILLAMGYSQKAALGGIRLTLGKQT 360
DGEK+SG++LVR+LN AGIG+SAGAACNSGKLSPSPILLAMGYS++AA +R+TLG+ T
Sbjct: 301 DGEKVSGRSLVRELNRAGIGVSAGAACNSGKLSPSPILLAMGYSEQAAFASVRMTLGRDT 360
Query: 361 TAADIDWTGIVVKQILQRLI 380
TAAD+DW +V KQ+LQR
Sbjct: 361 TAADVDWVAMVFKQVLQRFF 380
>SP67_06445 cysteine desulfurase
Length = 392
Score = 615 bits (1587), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 293/380 (77%), Positives = 335/380 (88%)
Query: 1 MQVYLDYSATTPTRPEAIAIIQTILTQQWGNPSSLHEWGNRAALILETARMQVAGLINAV 60
MQ+YLDYSATTPTR EAIA +QT+LTQQWGNPSSLHEWG RAA +LE ARMQ+AGLINA
Sbjct: 1 MQIYLDYSATTPTRQEAIATMQTVLTQQWGNPSSLHEWGQRAATVLEQARMQIAGLINAS 60
Query: 61 PESIIFTSGGTEADNLAIMGVARCYTTPQHMIISSVEHSAISEPAKMLENWGWEITRLGV 120
ESIIFTSGGTEADNLAIMG+AR Y PQH+IISSVEHSAISEPA++LE GWE+TRL V
Sbjct: 61 AESIIFTSGGTEADNLAIMGIARLYRQPQHIIISSVEHSAISEPARLLEQSGWEVTRLCV 120
Query: 121 NHQGRVNPEDLKAALRHNTVLVSVIYGQSEIGTVQPIAELGKITKTHGALFHTDAVQVAG 180
NHQG+VNP DLKAAL+ NTVLVS+IYGQSE+GT+QPIAELGKI ++ G LFHTDAVQ+AG
Sbjct: 121 NHQGKVNPLDLKAALQDNTVLVSIIYGQSEVGTIQPIAELGKIARSAGVLFHTDAVQLAG 180
Query: 181 RLPLDVQTLPVDLLSLSSHKLYGGLGAGALYLRPGVELMPLLGGGGQENGLRSGTQATPA 240
RLPL+VQ LPVDLLS+SSHK+YG GAGALY+RPGVEL+P+LGGGGQE RSGTQA P
Sbjct: 181 RLPLNVQNLPVDLLSISSHKIYGPQGAGALYVRPGVELVPILGGGGQEQRSRSGTQAVPV 240
Query: 241 IAGFGVAAELAAQELETETGRLILLRDRLFAILADVPGLIPTGDKIHRLPHHLSFYLEAA 300
IAGFGVAAELAAQE+ TET RL+ LRDRLF+ L DVPGLIPTGD + RLPHH+SF LE A
Sbjct: 241 IAGFGVAAELAAQEMATETPRLMQLRDRLFSQLTDVPGLIPTGDLVDRLPHHVSFCLEHA 300
Query: 301 DGEKISGKTLVRQLNLAGIGISAGAACNSGKLSPSPILLAMGYSQKAALGGIRLTLGKQT 360
DGEK+SG++LVR+LN AGIG+SAGAACNSGKLSPSPILLAMGYS++AA +R+TLG+ T
Sbjct: 301 DGEKVSGRSLVRELNRAGIGVSAGAACNSGKLSPSPILLAMGYSEQAAFASVRMTLGRDT 360
Query: 361 TAADIDWTGIVVKQILQRLI 380
TAAD+DW +V KQ+LQR
Sbjct: 361 TAADVDWVAMVFKQVLQRFF 380
>SP67_12095 cysteine desulfurase
Length = 388
Score = 273 bits (699), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 151/370 (40%), Positives = 223/370 (60%), Gaps = 13/370 (3%)
Query: 3 VYLDYSATTPTRPEAIAIIQTILTQQWGNPSSL-HEWGNRAALILETARMQVAGLINAVP 61
+YLD ATT +A + T+ +GNPSS+ H +G A ++ +R +A IN P
Sbjct: 6 IYLDNHATTTVDERVLAAMLPYFTEHFGNPSSINHIYGWEAEAAVKKSREILAAAINTTP 65
Query: 62 ESIIFTSGGTEADNLAIMGVARCYTTP-QHMIISSVEHSAISEPAKMLENWGWEITRLGV 120
E I+FTSG TEA+NLAI GVA Y QH+I + EH+A+ +P K L+ G+EIT L V
Sbjct: 66 EEIVFTSGATEANNLAIKGVAEAYFQKGQHIITVATEHNAVLDPCKYLQTLGFEITILPV 125
Query: 121 NHQGRVNPEDLKAALRHNTVLVSVIYGQSEIGTVQPIAELGKITKTHGALFHTDAVQVAG 180
G ++ L+ A R +T+LVSV+ +EIG +QP+ E+G++ + G +FH+DA Q G
Sbjct: 126 QKDGLIDLTQLEKAFRPDTILVSVMAANNEIGVLQPLTEIGEMCRERGVIFHSDAAQAIG 185
Query: 181 RLPLDVQTLPVDLLSLSSHKLYGGLGAGALYLR---PGVELMPLLGGGGQENGLRSGTQA 237
++PLDVQ + +DL+S ++HK+YG G GALY+R P V+L P GGG E G+RSGT
Sbjct: 186 KIPLDVQAMQIDLMSFTAHKVYGPKGIGALYVRRRNPRVQLAPQQHGGGHERGMRSGTLY 245
Query: 238 TPAIAGFGVAAELAAQELETETGRLILLRDRLFAILADVPGLIPTGDKIHRLPHHLSFYL 297
TP I GFG A E+A Q TE L LR RL+ L+ + G+ G RL +L+ +
Sbjct: 246 TPQIVGFGKAVEIALQVQATENQYLTQLRQRLWEQLSQLEGIYLNGHPTQRLAGNLNISI 305
Query: 298 EAADGEKISGKTLVRQLNLAGI-GISAGAACNSGKLSPSPILLAMGYSQKAALGGIRLTL 356
+ DG + L L + +S+G+AC+S +PS +L A+G+++K A +R +
Sbjct: 306 DGVDGAALL-------LGLQPVMAVSSGSACSSATTAPSHVLTALGHTEKLAYASLRFGI 358
Query: 357 GKQTTAADID 366
G+ TA +I+
Sbjct: 359 GRFNTAEEIE 368
>SP67_30830 hypothetical protein
Length = 379
Score = 177 bits (448), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 136/378 (35%), Positives = 195/378 (51%), Gaps = 19/378 (5%)
Query: 5 LDYSATTPTRPEAIAIIQTILTQQWGNPSSLHEWGNRAALILETARMQVAGLIN-AVPES 63
LD +A P + + I + L + NPSS H G A IL AR V L+ A +
Sbjct: 3 LDANANAPVTADVESAILSAL-RNGTNPSSDHAGGAAARRILVQARDAVISLVQGAFEDG 61
Query: 64 IIFTSGGTEADNLAIMGVARCYTTPQHMIISSVEHSAISEPAKMLENWGWEITRLGVNHQ 123
+IFTSG TEA+N+ + V T +I + VEH ++ PA+ L G + L V+
Sbjct: 62 VIFTSGCTEANNMVLNAV---RTMGATLITTVVEHPSVLAPAEALRAEGRVVHYLAVSQD 118
Query: 124 GRVNPEDLKAALR--HNTVLVSVIYGQSEIGTVQPIAELGKITKTH-GALFHTDAVQVAG 180
G ++ + L+ L H V++S+ SE G +QPI ++ + T LFHTDA Q G
Sbjct: 119 GLIDVDGLERLLSAVHGPVVLSLQTANSETGVIQPIPDIAAVAGTRPDTLFHTDAAQAMG 178
Query: 181 RLP--LDVQTLPVDLLSLSSHKLYGGLGAGALYLRPGVELMP-LLGGGGQENGLRSGTQA 237
+LP LD+ P +S+S HKL+G +G GAL L +P L+ GG QE G R+GT+
Sbjct: 179 KLPITLDLGCGP-HAISVSGHKLHGPMGVGALLLADCETRIPALMRGGDQEAGRRAGTEP 237
Query: 238 TPAIAGFGVAAELAAQELETETGRLILLRDRL-FAILADVPGLIPTGDKIHRLPHHLSFY 296
P IAG G A L A E++ ++ LRDRL I A + G RLP+ S
Sbjct: 238 LPMIAGMGAACALRADNFESDVEKMRTLRDRLEHGITAVLRNARVNGSGAPRLPNTSSIR 297
Query: 297 LEAADGEKISGKTLVRQLNLAGIGISAGAACNSGKLSPSPILLAMGYSQKAALGGIRLTL 356
D G LV L+ G+ +S G+AC+S + +PS +L AMG S+ A +R ++
Sbjct: 298 FVGLD-----GMALVAALDAEGVLVSQGSACSSMRPTPSHVLTAMGLSETEAFSTVRFSV 352
Query: 357 GKQTTAADID-WTGIVVK 373
+ +ID GIVVK
Sbjct: 353 SPLNSPDEIDAAVGIVVK 370
>SP67_03040 cysteine desulfurase
Length = 165
Score = 132 bits (331), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 94/159 (59%)
Query: 3 VYLDYSATTPTRPEAIAIIQTILTQQWGNPSSLHEWGNRAALILETARMQVAGLINAVPE 62
+YLD +ATT PE + + LT +GNPSS+H +G + + A QVA L+ A
Sbjct: 6 IYLDNNATTKVDPEVVEAMLPYLTDYYGNPSSMHTFGGQVKKAVNKAHEQVAALLGADES 65
Query: 63 SIIFTSGGTEADNLAIMGVARCYTTPQHMIISSVEHSAISEPAKMLENWGWEITRLGVNH 122
IIFTSGGTE DN AI +H+I + VEH A+ K LE G+ +T L VNH
Sbjct: 66 EIIFTSGGTEGDNAAIRAALLAQPDKRHIITTQVEHPAVLTLCKQLEKQGYNVTYLSVNH 125
Query: 123 QGRVNPEDLKAALRHNTVLVSVIYGQSEIGTVQPIAELG 161
G+++ +L+AAL NT LVS++Y +E G V PI ++G
Sbjct: 126 AGQLDLNELEAALTGNTALVSIMYANNETGVVFPIEQIG 164
>SP67_26615 alanine--glyoxylate aminotransferase
Length = 382
Score = 35.4 bits (80), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 129 EDLKAALR-HNTVLVSVIYGQSEIGTVQPIAELGKITKTHGALFHTDAVQVAGRLPLDVQ 187
++L+ A++ H ++++++ ++ G QP+ +G++ + G L D V G +P+ +
Sbjct: 137 DELRTAVQTHRPTILALVHAETSTGARQPLEGVGELCRELGCLLLIDTVTSLGGVPIFLD 196
Query: 188 TLPVDLLSLSSHKLYGGLGA 207
VDL S K GLG
Sbjct: 197 EWGVDLAYSCSQK---GLGC 213
>SP67_16185 cysteine desulfurase
Length = 181
Score = 33.1 bits (74), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 3/101 (2%)
Query: 3 VYLDYSATTPTRPEAIAIIQTILTQQWGNPSS-LHEWGNRAALILETARMQVAGLINAVP 61
VY D +AT+ + ++ Q N +H +A E +R +VA +NA
Sbjct: 30 VYFDNAATSQKPLFVLNTLRDYYEQYNSNVHRGVHTLSAKATDAYEESRDKVAAFVNAKS 89
Query: 62 -ESIIFTSGGTEADNLAIMGVARCYTTP-QHMIISSVEHSA 100
+ I+FT TEA NL P +I+S +EH +
Sbjct: 90 RQEIVFTRNATEAINLVAYSWGMNNLQPGDEIILSVMEHHS 130
>SP67_23240 glycine dehydrogenase
Length = 736
Score = 30.4 bits (67), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 10/99 (10%)
Query: 111 WGWEITRLGVNHQGRVNPEDLKA-ALRHNTVLVS--VIYGQSEIGTVQPIAELGKITKTH 167
G ++ + + QG ++ +DLKA A +H+ L + V Y + + I E+ + TH
Sbjct: 618 CGMKVVAVACDRQGNIDVDDLKAKAEKHSHELAALMVTYPSTHGVFEEAIQEICAVVHTH 677
Query: 168 GALFHTDAVQVAGRL----PLDVQTLPVDLLSLSSHKLY 202
G + D + ++ P D+ D+ L+ HK +
Sbjct: 678 GGQVYMDGANMNAQVGLCRPGDIG---ADVCHLNLHKTF 713
Database: GCA_000934435.1P
Posted date: Aug 27, 2016 10:33 PM
Number of letters in database: 1,718,357
Number of sequences in database: 5950
Lambda K H
0.318 0.135 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5950
Number of Hits to DB: 1,324,843
Number of extensions: 57739
Number of successful extensions: 196
Number of sequences better than 1.0: 9
Number of HSP's gapped: 187
Number of HSP's successfully gapped: 9
Length of query: 382
Length of database: 1,718,357
Length adjustment: 87
Effective length of query: 295
Effective length of database: 1,200,707
Effective search space: 354208565
Effective search space used: 354208565
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)