cyanobase / GCA_001277295.1 - AA650

BLASTP 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= AA650_17280 cysteine desulfurase (382 letters) Database: GCA_000759975.1P 1996 sequences; 508,621 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value EU96_0854 Cysteine desulfurase 230 2e-72 EU96_0563 Cysteine desulfurase 185 3e-55 EU96_0149 Cysteine desulfurase 98 8e-24 EU96_0531 Serine--pyruvate aminotransferase 36 0.001 EU96_1907 Ferredoxin-NADP(+) reductase 28 0.31 EU96_0095 Thiamine-monophosphate kinase 28 0.47 820f9206f1532084dd2355e8fdddee0e

>EU96_0854 Cysteine desulfurase Length = 381 Score = 230 bits (586), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 131/369 (35%), Positives = 206/369 (55%), Gaps = 14/369 (3%) Query: 3 VYLDYSATTPTRPEAIAIIQTILTQQWGNPSSLHEW-GNRAALILETARMQVAGLINAVP 61 + LDY ++TP + + ++ ++ + NP+S G A+ ILE +R ++ + Sbjct: 6 ILLDYQSSTPCSKDVVDSMKPFWSEIFSNPASKSNLAGINASAILEASREKIEKNLFLKN 65 Query: 62 ESIIFTSGGTEADNLAIMGVARCYTTPQ----HMIISSVEHSAISEPAKMLENWGWEITR 117 + +IFTSG TE++NLA++G AR Y H+I EH A+ EP L+ G+ +T Sbjct: 66 KKLIFTSGATESNNLALLGFARNYYKKTGNYGHIITLKTEHKAVLEPLNQLKKEGFMVTE 125 Query: 118 LGVNHQGRVNPEDLKAALRHNTVLVSVIYGQSEIGTVQPIAELGKITKTHGALFHTDAVQ 177 + ++ G ++ E K +R +T +VSV+ +EIG +QPI + KI K+ G FH+D Q Sbjct: 126 INPDNDGLISEEQFKKNIREDTFMVSVMLANNEIGVIQPIENISKICKSRGITFHSDFAQ 185 Query: 178 VAGRLPLDVQTLPVDLLSLSSHKLYGGLGAGALYLRPGVELMPLLGGGGQENGLRSGTQA 237 G + LD VD++++SSHK+YG G G L + + L PL+ GGGQE G RSGT Sbjct: 186 CLGYIELDNLLSDVDMITISSHKIYGPKGIGLLLIDEEINLEPLIVGGGQEYGFRSGTLP 245 Query: 238 TPAIAGFGVAAELAAQELETETGRLILLRDRLF-AILADVPGLIPTGDKIHRLPHHLSFY 296 P + GF A E+A + +L+L R+ L +L + GL+ G RLPH+L+ Sbjct: 246 LPLVVGFAKAIEIAVFNQKNNAEKLLLYRNNLLEGLLENNSGLLINGSIEKRLPHNLNLT 305 Query: 297 LEAADGEKISGKTLVRQLNLAGIGISAGAACNSGKLSPSPILLAMGYSQKAALGGIRLTL 356 + +G K +L + I S+G+AC++G+ PS +LLA+G S K A IRL++ Sbjct: 306 VLDVNGAKF------HKLLKSKIICSSGSACSNGE--PSHVLLALGRSFKEAESSIRLSI 357 Query: 357 GKQTTAADI 365 G T + DI Sbjct: 358 GLSTNSKDI 366 >EU96_0563 Cysteine desulfurase Length = 390 Score = 185 bits (470), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 122/375 (32%), Positives = 190/375 (50%), Gaps = 14/375 (3%) Query: 3 VYLDYSATTPTRPEAIAIIQTILTQQWGNPSSLHEWGNRAALILETARMQVAGLINAVPE 62 +YLD ++TTP + II + W NPSS +E G + + LE R ++A + +A PE Sbjct: 6 IYLDNASTTPLSDNVLNIINSTYRNYWCNPSSTYEQGIKCSTYLEKIRSKIAYIFDAEPE 65 Query: 63 SIIFTSGGTEADNLAIMGVARCYTTPQHMIISSVEHSAISEPAKMLENWGWEITRLGVNH 122 IIFTSG +E+ N+ + + + ++IS++EH A + A L W+I VN+ Sbjct: 66 DIIFTSGSSESTNIVFSKIYESFKNGR-VVISNIEHQATTICANKLRKQSWDICEWTVNN 124 Query: 123 QGRVNPEDLKAALRHNTVLVSVIYGQSEIGTVQPIAELGKITKTHGALFHTDAVQVAGRL 182 G +N +++ L +T LVS+I+GQSEIGT+QP+ +G + +FH D Q+ Sbjct: 125 DGILNILNIEKILTKDTKLVSIIWGQSEIGTIQPVQFIGSKCEKLNIMFHLDGTQILSNG 184 Query: 183 PLDVQTLPVDLLSLSSHKLYGGLGAGALYLRPGVELMPLLGGGG----QENGLRSGTQAT 238 + L D LSLS+HK G G G L + + +L QE +R GTQA Sbjct: 185 IFSWRDLKCDFLSLSAHKFGGPKGIGILLTKEKSRM--ILKNKDISLTQEYSIRQGTQAL 242 Query: 239 PAIAGF-----GVAAELAAQELETE--TGRLILLRDRLFAILADVPGLIPTGDKIHRLPH 291 P IAG + ++ + TE + + L++ F + D + TG HRLP+ Sbjct: 243 PLIAGMYESLKNIKGKIKLYDYITEFPSNNINKLKNYFFKKIEDNNHIKITGSINHRLPN 302 Query: 292 HLSFYLEAADGEKISGKTLVRQLNLAGIGISAGAACNSGKLSPSPILLAMGYSQKAALGG 351 H+SF + E I +V ++ I IS+G+AC+S PS L +G+ Sbjct: 303 HISFLILNKLFEPIRAYKIVNFMSENHIAISSGSACSSSSGKPSSTLKNIGFKDDELYSN 362 Query: 352 IRLTLGKQTTAADID 366 IR+TLG ++ID Sbjct: 363 IRVTLGSINNKSEID 377 >EU96_0149 Cysteine desulfurase Length = 417 Score = 97.8 bits (242), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 75/238 (31%), Positives = 124/238 (52%), Gaps = 21/238 (8%) Query: 3 VYLDYSATTPTRPEAIAIIQTILTQQWGNPSS-----LHEWGNRAALILETARMQVAGLI 57 +YLD++ATT +P I +++ I + + N ++ H+ +A E AR ++ I Sbjct: 29 IYLDHAATT-QKP--IQVLEKI-NEYYRNFNANVHRGAHQLSAKATEEFENARYLISKYI 84 Query: 58 NA-VPESIIFTSGGTEADNLAIMGVARCY-----TTPQHMIISSVEHSAISEPAKMLE-N 110 NA + IIFT TEA NLA AR + +++S +EH + P +M+ Sbjct: 85 NANSTKEIIFTRNATEAINLA----ARSWGESSLRENDEILLSIMEHHSNIVPWQMVAAK 140 Query: 111 WGWEITRLGVNHQGRVNPEDLKAALRHNTVLVSVIYGQSEIGTVQPIAELGKITKTHGAL 170 ++ +G++ G+++ +D K+ L T +VS+++ + +G PI E+ K+ K G+L Sbjct: 141 NKCKLKFIGIDKNGKLDIDDFKSKLTSRTKIVSLVHVSNTLGCCNPIKEITKLAKQKGSL 200 Query: 171 FHTDAVQVAGRLPLDVQTLPVDLLSLSSHKLYGGLGAGALYLRPGV-ELMPLLGGGGQ 227 DA Q LDV L +D L+ S HKL G G G L+ R + E +P L GGG+ Sbjct: 201 VLIDACQSLAHQKLDVIDLDIDFLAGSGHKLCGPTGIGFLWSRKEILEKIPPLFGGGE 258 >EU96_0531 Serine--pyruvate aminotransferase Length = 394 Score = 36.2 bits (82), Expect = 0.001, Method: Compositional matrix adjust. Identities = 16/60 (26%), Positives = 31/60 (51%) Query: 141 LVSVIYGQSEIGTVQPIAELGKITKTHGALFHTDAVQVAGRLPLDVQTLPVDLLSLSSHK 200 + ++++ ++ G +QP+ +G + + + LF DAV G L L + +DL S K Sbjct: 153 IFAIVHAETSSGVLQPLDGIGDVCRKNNCLFLVDAVTSLGALELLIDEWKIDLAYSCSQK 212 >EU96_1907 Ferredoxin-NADP(+) reductase Length = 369 Score = 28.5 bits (62), Expect = 0.31, Method: Compositional matrix adjust. Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 5/57 (8%) Query: 278 GLIPTGDKIHRLPHHLSFYLEAA--DGEKISGKTL---VRQLNLAGIGISAGAACNS 329 G++P G+ + PH L Y A+ G+ +G T+ VRQL G + C++ Sbjct: 130 GIMPAGEDANGKPHKLRLYSIASTRHGDDFNGNTVSLCVRQLQYEKDGETINGVCST 186 >EU96_0095 Thiamine-monophosphate kinase Length = 328 Score = 27.7 bits (60), Expect = 0.47, Method: Compositional matrix adjust. Identities = 12/32 (37%), Positives = 18/32 (56%) Query: 233 SGTQATPAIAGFGVAAELAAQELETETGRLIL 264 G Q T +I FG+ EL + ++TG +IL Sbjct: 127 KGNQKTISITAFGIQGELELRRNASKTGEIIL 158 Database: GCA_000759975.1P Posted date: Aug 27, 2016 10:46 PM Number of letters in database: 508,621 Number of sequences in database: 1996 Lambda K H 0.318 0.135 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1996 Number of Hits to DB: 339,044 Number of extensions: 13070 Number of successful extensions: 52 Number of sequences better than 1.0: 6 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 6 Length of query: 382 Length of database: 508,621 Length adjustment: 78 Effective length of query: 304 Effective length of database: 352,933 Effective search space: 107291632 Effective search space used: 107291632 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 53 (25.0 bits)