BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= AA650_17280 cysteine desulfurase
(382 letters)
Database: GCA_000317045.1P
3815 sequences; 1,301,653 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GEI7407_1047 aminotransferase class V 537 0.0
GEI7407_3431 Cysteine desulfurase 278 3e-90
GEI7407_2239 cysteine desulfurase 92 3e-21
GEI7407_2642 aminotransferase class V 60 6e-11
GEI7407_1798 L-2,4-diaminobutyrate decarboxylase 39 4e-04
GEI7407_0151 ATPase AAA-2 domain protein 30 0.27
>GEI7407_1047 aminotransferase class V
Length = 388
Score = 537 bits (1384), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 266/381 (69%), Positives = 313/381 (82%)
Query: 1 MQVYLDYSATTPTRPEAIAIIQTILTQQWGNPSSLHEWGNRAALILETARMQVAGLINAV 60
MQ+YLD+SATTP RPEAIA ++ + T+QWGNPSS+H WG RAA+ LETAR+QVA L+NA
Sbjct: 1 MQIYLDHSATTPPRPEAIAAMEQVFTRQWGNPSSIHGWGERAAIALETARLQVAALLNAS 60
Query: 61 PESIIFTSGGTEADNLAIMGVARCYTTPQHMIISSVEHSAISEPAKMLENWGWEITRLGV 120
PE+I+FTSGGTEADNLAI+GVAR Y PQH+IISS+EH A+SEPA+ LE+ GW++TRL V
Sbjct: 61 PEAIVFTSGGTEADNLAILGVARHYQRPQHLIISSIEHPAVSEPARFLESQGWQVTRLPV 120
Query: 121 NHQGRVNPEDLKAALRHNTVLVSVIYGQSEIGTVQPIAELGKITKTHGALFHTDAVQVAG 180
+ GRVNP DL AA R TVLVS++YGQSE+GT+QPI +LG + + G LFH DAVQVAG
Sbjct: 121 DRLGRVNPADLAAAFRPETVLVSILYGQSEVGTLQPIDQLGTLCRDRGVLFHVDAVQVAG 180
Query: 181 RLPLDVQTLPVDLLSLSSHKLYGGLGAGALYLRPGVELMPLLGGGGQENGLRSGTQATPA 240
RLPLDVQ LPVDLLSLSSHKLYG GAGALY+RPGV+L+PLLGGGGQE GLRSGTQ P
Sbjct: 181 RLPLDVQQLPVDLLSLSSHKLYGPQGAGALYVRPGVDLIPLLGGGGQEFGLRSGTQPVPV 240
Query: 241 IAGFGVAAELAAQELETETGRLILLRDRLFAILADVPGLIPTGDKIHRLPHHLSFYLEAA 300
IAGFGVAA LAAQE+ E+ RL LRDRLF +LAD P L+PTGD++HRLPHH+SF
Sbjct: 241 IAGFGVAAALAAQEMAAESLRLQGLRDRLFDLLADCPDLVPTGDRLHRLPHHVSFCARHT 300
Query: 301 DGEKISGKTLVRQLNLAGIGISAGAACNSGKLSPSPILLAMGYSQKAALGGIRLTLGKQT 360
DGE +SGKT+VRQ+NLAGI ISAG+AC+SGK PSPIL AMGYS + A IRLTLG T
Sbjct: 301 DGEMLSGKTIVRQMNLAGIAISAGSACHSGKTVPSPILKAMGYSDRLAQSAIRLTLGHST 360
Query: 361 TAADIDWTGIVVKQILQRLIP 381
T ADIDWT V++Q+L RL P
Sbjct: 361 TLADIDWTATVLRQVLARLTP 381
>GEI7407_3431 Cysteine desulfurase
Length = 394
Score = 278 bits (711), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 158/369 (42%), Positives = 219/369 (59%), Gaps = 11/369 (2%)
Query: 3 VYLDYSATTPTRPEAIAIIQTILTQQWGNPSSL-HEWGNRAALILETARMQVAGLINAVP 61
+YLD ATTP P ++ + +GNP+S+ H +G A ++ +R +A INA P
Sbjct: 5 IYLDCHATTPLDPRVFEAMRPFFLEHFGNPASVTHVYGWEAEAAVQRSREAIARAINAQP 64
Query: 62 ESIIFTSGGTEADNLAIMGVARCYTTP-QHMIISSVEHSAISEPAKMLENWGWEITRLGV 120
E I+FTSG TEA+NLAI GVA Y +H++ EHSA+ +P + L G+E+T L V
Sbjct: 65 EEIVFTSGATEANNLAIKGVAEAYFAKGRHIVTVQTEHSAVLDPCRYLATLGFEVTFLSV 124
Query: 121 NHQGRVNPEDLKAALRHNTVLVSVIYGQSEIGTVQPIAELGKITKTHGALFHTDAVQVAG 180
G ++ DL +LR +TVLVSV+ +EIG +QP+AE+G + + G LFHTDA Q
Sbjct: 125 QPDGLIDLADLARSLRPDTVLVSVMAANNEIGVLQPLAEIGALCRDRGVLFHTDAAQAIA 184
Query: 181 RLPLDVQTLPVDLLSLSSHKLYGGLGAGALYLR---PGVELMPLLGGGGQENGLRSGTQA 237
++P DVQ L +DL+SL++HK YG G GALY+R P V L P L GGG E G RSGT
Sbjct: 185 KIPFDVQALHLDLMSLTAHKAYGPKGIGALYVRRRDPRVTLAPQLHGGGHERGRRSGTLP 244
Query: 238 TPAIAGFGVAAELAAQELETETGRLILLRDRLFAILADVPGLIPTGDKIHRLPHHLSFYL 297
TP I G A L +L E R+ LR RL+ L +PGL G RLP +L+ L
Sbjct: 245 TPQIVGLAEAIALGVADLSAEAQRITALRQRLWQRLETLPGLWLNGHPTQRLPGNLN--L 302
Query: 298 EAADGEKISGKTLVRQLNLAGIGISAGAACNSGKLSPSPILLAMGYSQKAALGGIRLTLG 357
AD + G+ L+ L + + +S+G+AC S K+ PS +L A+G S + A IR +G
Sbjct: 303 SVAD---VDGQALLLGLQ-STVAVSSGSACTSAKIEPSHVLRALGRSPELAFASIRFGIG 358
Query: 358 KQTTAADID 366
+ T A+ID
Sbjct: 359 RFNTEAEID 367
>GEI7407_2239 cysteine desulfurase
Length = 420
Score = 91.7 bits (226), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 111/230 (48%), Gaps = 8/230 (3%)
Query: 3 VYLDYSATTPTRPEAI--AIIQTILTQQWGNPSSLHEWGNRAALILETARMQVAGLINAV 60
VYLD +AT+ +P+A+ A+ +H RA E AR +VA +NA
Sbjct: 30 VYLDNAATS-QKPQAVLDALRHYYERDNANVHRGVHTLSARATDAYEGAREKVARFVNAA 88
Query: 61 P-ESIIFTSGGTEADNLAIMGVARCYTTP-QHMIISSVEHSAISEPAKML-ENWGWEITR 117
+ I++T TEA NL + P +I+S +EH + P +M+ + G +
Sbjct: 89 SSQEIVYTRNATEAINLVAYAWGQQNLGPGDEIILSVMEHHSNLIPWQMVAQRTGAVLKF 148
Query: 118 LGVNHQGRVNPEDLKAALRHNTVLVSVIYGQSEIGTVQPIAELGKITKTHGALFHTDAVQ 177
+G++ + E +A + T LVSV++ + +G V P+ E+ I HGA DA Q
Sbjct: 149 VGLDSNEGFDLEQYRALVGDRTKLVSVVHVSNTLGCVNPVKEIAAIAHQHGARVLIDACQ 208
Query: 178 VAGRLPLDVQTLPVDLLSLSSHKLYGGLGAGALYLRPGV--ELMPLLGGG 225
+P+DVQ + D L S HK+ G G LY + V + P LGGG
Sbjct: 209 SVPHMPIDVQDIDCDWLVASGHKMCAPTGIGFLYGKREVLRAMPPFLGGG 258
>GEI7407_2642 aminotransferase class V
Length = 411
Score = 60.5 bits (145), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 132/306 (43%), Gaps = 33/306 (10%)
Query: 2 QVYLDYSATTPTRPEAI-AIIQTILTQQWGNPSSLHEWGNRAALILETARMQVAGLINAV 60
+ Y +Y P A+ A+ + T Q P S G+ A + E R +A ++
Sbjct: 24 KAYFNYGGQGPMPQAALDALFEGYRTVQARGPFS-QSAGSWATEVTEALRKAIAAELSVE 82
Query: 61 PESIIFTSGGTEADNLAIMGVARCYTTPQHMIISSVEHSAISEPA-KMLENWGWEITRLG 119
P +I T + N+A+ G+ + + H+++S EH + A ++ +G E++
Sbjct: 83 PGTISLTENVSAGCNVALWGLD--WRSGDHLLLSDCEHPGVVAAAYEVQRRFGVEVSVCP 140
Query: 120 VNHQGRVNPEDLKAAL----RHNT---VLVSVIYGQSEIGTVQPIAELGKITKTHGAL-F 171
+ Q +N D AA+ R T VL V++ ++ ++ IA+ + T L
Sbjct: 141 L--QTTLNGGDPVAAVMAHVRPQTRLVVLSHVLWNTGQVLPLKAIAQACRQADTREPLRI 198
Query: 172 HTDAVQVAGRLPLDVQTLPVDLLSLSSHKLYGG-LGAGALYLRPGV--ELMP-LLGGGG- 226
DA Q G +PLD+ L VD + + HK + G G G LY+RP L P L+G G
Sbjct: 199 LVDAAQSVGAIPLDLADLGVDFYAFTGHKWWCGPEGVGGLYVRPEALESLRPTLIGWRGV 258
Query: 227 ---------QENGLRS--GTQATPAIAGFGVAAELAAQ--ELETETGRLILLRDRLFAIL 273
Q +G R T A P G A + Q R++ L DRL+ L
Sbjct: 259 VQVTDGVIWQPDGRRFEVATSAYPLYCGLRAAIAVHNQWGTARDRYERMVSLSDRLWRGL 318
Query: 274 ADVPGL 279
+ + +
Sbjct: 319 SKIEAI 324
>GEI7407_1798 L-2,4-diaminobutyrate decarboxylase
Length = 511
Score = 38.9 bits (89), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 36/189 (19%)
Query: 65 IFTSGGTEADNLAIMGVAR---C-----YTTPQH----------MIISSVEHSAISEPAK 106
+FTSGGT+++ + ++ +AR C ++ Q ++ S V H I + A
Sbjct: 160 VFTSGGTQSNFMGLL-LARDRACRDRLGWSVQQQGLPPEARRFRILCSEVAHFTIRQGAS 218
Query: 107 MLENWGWEITRLGVNHQGRVNPEDLK---AALRHNT---VLVSVIYGQSEIGTVQPIAEL 160
+L + + + R+ P+D A LR + + G ++ G++ P+ L
Sbjct: 219 LLGLGEQAVVPVKTDAAFRMCPQDAAEKLAELRCQDLWPIALVATAGTTDFGSIDPLEPL 278
Query: 161 GKITKTHGALFHTDAVQVAGRLPLDVQTLP-------VDLLSLSSHKL-YGGLGAGALYL 212
I + G FH DA G L L + P D L++ HKL Y + GA +
Sbjct: 279 AAIAREAGLWFHVDAA-FGGALILSDRHRPKLAGIDAADSLTVDFHKLFYQPISCGAFLV 337
Query: 213 RP--GVELM 219
R ELM
Sbjct: 338 RDRAAFELM 346
>GEI7407_0151 ATPase AAA-2 domain protein
Length = 822
Score = 30.0 bits (66), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 49 ARMQVAGLINA----VPESIIFTSGGTEADNLAIMGV---ARCYTTPQHMIISSVEHSAI 101
AR +V G+I VP I T + A+ GV ++ Y TP+H+++S V+ +
Sbjct: 59 ARREVEGIIGRGSGIVPADIPPTPRTRQVFEQALQGVQQESQAYVTPEHILLSLVQ-AGD 117
Query: 102 SEPAKMLENWGWEI 115
S AK+L N G ++
Sbjct: 118 SVAAKVLTNLGVDL 131
Database: GCA_000317045.1P
Posted date: Aug 27, 2016 11:10 PM
Number of letters in database: 1,301,653
Number of sequences in database: 3815
Lambda K H
0.318 0.135 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3815
Number of Hits to DB: 1,041,273
Number of extensions: 46511
Number of successful extensions: 159
Number of sequences better than 1.0: 8
Number of HSP's gapped: 154
Number of HSP's successfully gapped: 8
Length of query: 382
Length of database: 1,301,653
Length adjustment: 85
Effective length of query: 297
Effective length of database: 977,378
Effective search space: 290281266
Effective search space used: 290281266
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)