cyanobase / GCA_001277295.1 - AA650

BLASTP 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= AA650_17280 cysteine desulfurase (382 letters) Database: GCA_000230675.2P 2992 sequences; 799,772 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Syn8016DRAFT_1888 Cysteine desulfurase 259 2e-83 Syn8016DRAFT_0444 Cysteine desulfurase 225 3e-70 Syn8016DRAFT_2350 cysteine desulfurase, SufS subfamily 99 3e-24 Syn8016DRAFT_0684 Serine--pyruvate transaminase 42 2e-05 Cc7415846d331fab30e7cd1cc929e985

>Syn8016DRAFT_1888 Cysteine desulfurase Length = 393 Score = 259 bits (663), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 150/383 (39%), Positives = 221/383 (57%), Gaps = 14/383 (3%) Query: 3 VYLDYSATTPTRPEAIAIIQTILTQQWGNPSSL-HEWGNRAALILETARMQVAGLINAVP 61 + LD+ ATTP + + ++ +QWGNPSS H G AA ++ AR Q++ +N Sbjct: 15 IALDHQATTPCHEDVMTAMEPWWREQWGNPSSRQHRLGLTAAAAVQVAREQLSDCLNCSA 74 Query: 62 ESIIFTSGGTEADNLAIMGVARCYT----TPQHMIISSVEHSAISEPAKMLENWGWEITR 117 E +IFTSG TEA+N+A++G AR + P H+I EH A+ +P + L + G+ IT Sbjct: 75 EQLIFTSGATEANNIALLGHARAVSRERGKPGHLISMVSEHHAVLDPLQQLRSEGFRITL 134 Query: 118 LGVNHQGRVNPEDLKAALRHNTVLVSVIYGQSEIGTVQPIAELGKITKTHGALFHTDAVQ 177 L G ++P+ L+AA+ +T LVSV+ +EIG +QP+ E+ + + HG H+DA Q Sbjct: 135 LSPEPDGLLDPKKLEAAISEDTQLVSVMLANNEIGVIQPLPEVAALCRAHGVTLHSDAAQ 194 Query: 178 VAGRLPLDVQTLPVDLLSLSSHKLYGGLGAGALYLRPGVELMPLLGGGGQENGLRSGTQA 237 G +PLD Q L D LSLS+HKL G G GAL P + + PL GGGQE GLR GT Sbjct: 195 AFGHIPLDSQGLGADFLSLSAHKLNGPKGVGALICHPELAVEPLQWGGGQERGLRPGTLP 254 Query: 238 TPAIAGFGVAAELAAQELETETGRLILLRDRLF-AILADVPGLIPTGDKIHRLPHHLSFY 296 P I GF AAELA +LE+ + RL LR+RL+ + P ++ G RLPH+L+ Sbjct: 255 VPLIMGFAKAAELALSDLESRSQRLEQLRNRLWEGVKQRHPTVLLNGHATARLPHNLNIT 314 Query: 297 LEAADGEKISGKTLVRQLNLAGIGISAGAACNSGKLSPSPILLAMGYSQKAALGGIRLTL 356 + G K+ R + S+G+AC+ G+ PS +L+A+G S++ A +RL+L Sbjct: 315 IPGVLGSKLHRALRSR------VACSSGSACSRGE--PSHVLMALGRSRQEAEASLRLSL 366 Query: 357 GKQTTAADIDWTGIVVKQILQRL 379 G+ TT DID + ++ +L Sbjct: 367 GRSTTDGDIDQAIQALNDVIHQL 389 >Syn8016DRAFT_0444 Cysteine desulfurase Length = 395 Score = 225 bits (574), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 147/361 (40%), Positives = 212/361 (58%), Gaps = 7/361 (1%) Query: 3 VYLDYSATTPTRPEAIAIIQTILTQQWGNPSSLHEWGNRAALILETARMQVAGLINAVPE 62 YLD AT P R IA + + + WGNPSSLH G AA LE AR+ + + A Sbjct: 9 FYLDGCATAPLRESVIACMGKVQQESWGNPSSLHRIGCDAAESLERARLSIGESLGADRS 68 Query: 63 SIIFTSGGTEADNLAIMGVARCYTTPQHMIISSVEHSAISEPAKMLENWGWEITRLGVNH 122 I+F+SG TE+ +LA++G+A+ +P ++IS+VEH A++ A+ L GW + R V+ Sbjct: 69 DILFSSGATESAHLALLGLAK-TESPGRLVISAVEHPAVAAAAQQLAESGWTVERWPVDA 127 Query: 123 QGRVNPEDLKAALRHNTVLVSVIYGQSEIGTVQPIAELGKITKTHGALFHTDAVQVAGRL 182 G++ + L+ L T +VS+I+GQSE+GT+QPI +G+ ++ FHTDA QV + Sbjct: 128 DGQIEMKHLERLLEPPTKIVSLIWGQSEVGTLQPIQAVGEACRSKHIPFHTDATQVLSQG 187 Query: 183 PLDVQTLPVDLLSLSSHKLYGGLGAGALYLRPGV--ELMPLLGGGGQENGLRSGTQ---- 236 + LPVDLL+ S+HK G G G L LRP + + PLL GG QENGLR+GT+ Sbjct: 188 CPNWNELPVDLLTASAHKCGGPRGIGLLLLRPEIAERIQPLLAGGHQENGLRAGTECPVL 247 Query: 237 ATPAIAGFGVAAELAAQELETETGRLILLRDRLFAILADVPGLIPTGDKIHRLPHHLSFY 296 A A F A A +++T + +RD L A+L + +G RLPHHLS Sbjct: 248 AQGMAAAFREIAPCQANQVKTSGSGIAPVRDALLALLRQNDAIRVSGHPTDRLPHHLSVL 307 Query: 297 LEAADGEKISGKTLVRQLNLAGIGISAGAACNSGKLSPSPILLAMGYSQKAALGGIRLTL 356 + G+ +SG+ LVR L+ GI S+G+AC+SG+ S SP+L AMG + G+RL+L Sbjct: 308 VSDRHGQPMSGRALVRALDREGIAASSGSACSSGRESDSPVLEAMGVDPRWRRSGLRLSL 367 Query: 357 G 357 G Sbjct: 368 G 368 >Syn8016DRAFT_2350 cysteine desulfurase, SufS subfamily Length = 422 Score = 99.4 bits (246), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 118/395 (29%), Positives = 166/395 (42%), Gaps = 54/395 (13%) Query: 3 VYLDYSATTPTRPEAIAIIQTILTQQWGN-PSSLHEWGNRAALILETARMQVAGLINAVP 61 +YLD++AT+ + IQ N H+ RA E AR AGLI A Sbjct: 34 IYLDHAATSQKPRVVLDAIQHYYACDNANVHRGAHQLSARATESFEGARSITAGLIGASS 93 Query: 62 -ESIIFTSGGTEADNLAIMGVARCYTTPQ-----HMIISSVEHSAISEPAKML-ENWGWE 114 + I+FT TEA NL VAR + Q ++++ +EH + P ++L E G Sbjct: 94 AKEIVFTRNATEAINL----VARSWGDAQLKAGDEVLLTVMEHHSNLVPWQLLAERTGCV 149 Query: 115 ITRLGVNHQGRVNPEDLKAALRHNTVLVSVIYGQSEIGTVQPIAELGKITKTHGALFHTD 174 + +GV +G ++ DL+ L T LVS+++ + +G PI E+ + GA D Sbjct: 150 LRHVGVTPEGTLDLADLRDQLNERTRLVSLVHISNTLGCCNPIEEIAALAHAVGAKVLVD 209 Query: 175 AVQVAGRLPLDVQTLPVDLLSLSSHKLYGGLGAGALYLRPG--VELMPLLGGGG--QENG 230 A Q P+ VQ+L D L SSHKL G G G L+ + + P LGGG QE Sbjct: 210 ACQSLAHKPISVQSLGADFLVGSSHKLCGPTGMGFLWAAEETLMAMPPFLGGGEMIQEVF 269 Query: 231 LRSGTQA---------TPAIA---GFGVAAEL-------AAQELETETGRLILLRDRLFA 271 L T A TPAI G G A A Q E E L LF Sbjct: 270 LDHSTWADLPHKFEAGTPAIGEAIGMGAAITYLQTLGFDAIQAWEAE------LTTHLFG 323 Query: 272 ILADVPGLIPTGDKIHRLPHHLSFYLEAADGEKISGKTLVRQLNLAGIGISAGAACNSGK 331 L + GL G + P + +G + + L+LAG+ I +G C Sbjct: 324 RLQSIDGLRILGPTPEQQPDRGALATFVVEG--VHANDIAAMLDLAGVCIRSGHHCC--- 378 Query: 332 LSPSPILLAMGYSQKAALGGIRLTLGKQTTAADID 366 P+ G + G R +L TT A+ID Sbjct: 379 ---QPLHRLYGVT-----GSARASLSFCTTHAEID 405 >Syn8016DRAFT_0684 Serine--pyruvate transaminase Length = 398 Score = 42.4 bits (98), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 2/91 (2%) Query: 129 EDLKAAL-RHNTVLVSVIYGQSEIGTVQPIAELGKITKTHGALFHTDAVQVAGRLPLDVQ 187 E+L+AAL H ++++++ ++ G QP+ +G + + H L D V G +PL + Sbjct: 144 EELEAALIEHKPTILAMVHAETSTGVCQPMEGIGDLCRKHDCLLLLDTVTSLGGVPLYLD 203 Query: 188 TLPVDL-LSLSSHKLYGGLGAGALYLRPGVE 217 VDL S S L G G + P E Sbjct: 204 EWKVDLAYSCSQKGLSCPPGLGPFTMGPRAE 234 Database: GCA_000230675.2P Posted date: Aug 27, 2016 11:13 PM Number of letters in database: 799,772 Number of sequences in database: 2992 Lambda K H 0.318 0.135 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2992 Number of Hits to DB: 641,876 Number of extensions: 28679 Number of successful extensions: 112 Number of sequences better than 1.0: 6 Number of HSP's gapped: 105 Number of HSP's successfully gapped: 6 Length of query: 382 Length of database: 799,772 Length adjustment: 81 Effective length of query: 301 Effective length of database: 557,420 Effective search space: 167783420 Effective search space used: 167783420 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 55 (25.8 bits)