BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= AA650_17280 cysteine desulfurase
(382 letters)
Database: GCA_000204075.1P
5706 sequences; 1,938,322 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Ava_4856 Aromatic amino acid beta-eliminating lyase/threonine al... 637 0.0
Ava_3914 Aromatic amino acid beta-eliminating lyase/threonine al... 291 3e-95
Ava_0437 Aromatic amino acid beta-eliminating lyase/threonine al... 291 4e-95
Ava_4245 Aromatic amino acid beta-eliminating lyase/threonine al... 256 1e-81
Ava_B0304 Aminotransferase, class V 204 1e-61
Ava_0427 cysteine desulfurase 87 2e-19
Ava_4866 Aminotransferase, class V 73 6e-15
Ava_1826 Cysteine desulfurase related protein 60 2e-10
Ava_5058 alanine-glyoxylate aminotransferase apoenzyme 38 0.001
Ava_2838 L-2,4-diaminobutyrate decarboxylase 31 0.21
Ava_5047 thiamine-phosphate diphosphorylase 30 0.49
>Ava_4856 Aromatic amino acid beta-eliminating lyase/threonine aldolase
Length = 389
Score = 637 bits (1644), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/382 (81%), Positives = 344/382 (90%), Gaps = 1/382 (0%)
Query: 1 MQVYLDYSATTPTRPEAIAIIQTILTQQWGNPSSLHEWGNRAALILETARMQVAGLINAV 60
MQ+YLDYSATTPT EAIA++Q++LTQQWGNPSSLHEWG RA I+E AR+QVAGLINA
Sbjct: 1 MQIYLDYSATTPTCTEAIAVMQSVLTQQWGNPSSLHEWGQRATTIVEQARVQVAGLINAA 60
Query: 61 -PESIIFTSGGTEADNLAIMGVARCYTTPQHMIISSVEHSAISEPAKMLENWGWEITRLG 119
PESIIFTSGGTEA+NLAIMGV R PQH+IISSVEHSAISEPA +LE WGWE+TRLG
Sbjct: 61 NPESIIFTSGGTEANNLAIMGVVRMQNVPQHIIISSVEHSAISEPANLLEKWGWEVTRLG 120
Query: 120 VNHQGRVNPEDLKAALRHNTVLVSVIYGQSEIGTVQPIAELGKITKTHGALFHTDAVQVA 179
V++ GRVNPEDLKAALRHNTVLVSVIYGQSEIGTVQPIAELGKIT+ HGALFHTDAVQ
Sbjct: 121 VDNTGRVNPEDLKAALRHNTVLVSVIYGQSEIGTVQPIAELGKITQQHGALFHTDAVQAV 180
Query: 180 GRLPLDVQTLPVDLLSLSSHKLYGGLGAGALYLRPGVELMPLLGGGGQENGLRSGTQATP 239
GRLP+DVQ LPVDLLSLSSHKLYG G GALY+RPGVEL+PLL GGGQE GLRSGTQA P
Sbjct: 181 GRLPIDVQQLPVDLLSLSSHKLYGPQGVGALYIRPGVELLPLLNGGGQERGLRSGTQAVP 240
Query: 240 AIAGFGVAAELAAQELETETGRLILLRDRLFAILADVPGLIPTGDKIHRLPHHLSFYLEA 299
IAGFGVAAE+AA+EL E RL+ LRDRLFA LADVPGLIPTGD+ +RLPHH+SFYLE
Sbjct: 241 IIAGFGVAAEIAAEELSIEIPRLMKLRDRLFAQLADVPGLIPTGDRENRLPHHVSFYLEQ 300
Query: 300 ADGEKISGKTLVRQLNLAGIGISAGAACNSGKLSPSPILLAMGYSQKAALGGIRLTLGKQ 359
ADGEK+SGKTLVR LNLAGIGISAGAAC+SGKLSPSPILLAMGYS KAALGGIRLTLG++
Sbjct: 301 ADGEKLSGKTLVRHLNLAGIGISAGAACHSGKLSPSPILLAMGYSTKAALGGIRLTLGRE 360
Query: 360 TTAADIDWTGIVVKQILQRLIP 381
TTAAD+DWT +V+KQILQRL+P
Sbjct: 361 TTAADVDWTAMVLKQILQRLVP 382
>Ava_3914 Aromatic amino acid beta-eliminating lyase/threonine aldolase
Length = 400
Score = 291 bits (746), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 162/378 (42%), Positives = 223/378 (58%), Gaps = 6/378 (1%)
Query: 3 VYLDYSATTPTRPEAIAIIQTILTQQWGNPSSLHEWGNRAALILETARMQVAGLINAVPE 62
+YLD +ATT PE + I LT +GNPSS+H +G + + TAR QVA L+ A
Sbjct: 4 IYLDNNATTKVDPEVVEAIMPYLTDYYGNPSSMHTFGGQLGKAVRTAREQVAALLGADES 63
Query: 63 SIIFTSGGTEADNLAIMGVARCYTTPQHMIISSVEHSAISEPAKMLENWGWEITRLGVNH 122
I+FTS GTE DN AI +H+I + VEH A+ K LE G+ +T L VN
Sbjct: 64 EIVFTSCGTEGDNAAIRAALLAQPEKRHIITTQVEHPAVLNVCKQLETQGYTVTYLSVNG 123
Query: 123 QGRVNPEDLKAALRHNTVLVSVIYGQSEIGTVQPIAELGKITKTHGALFHTDAVQVAGRL 182
G+++ ++L+A+L NT LV+++Y +E GTV PI E+GK K GA+FH DAVQ G++
Sbjct: 124 HGQLDLDELEASLTGNTALVTIMYANNETGTVFPIEEIGKRVKERGAIFHVDAVQAVGKI 183
Query: 183 PLDVQTLPVDLLSLSSHKLYGGLGAGALYLRPGVELMPLLGGGGQENGLRSGTQATPAIA 242
PL+++T +D+L++S HK++ G GALY+R GV PLL GG QE G R+GT+ P I
Sbjct: 184 PLNMKTSTIDMLTISGHKIHAPKGIGALYVRRGVRFRPLLIGGHQERGRRAGTENVPGIV 243
Query: 243 GFGVAAELAAQELETETGRLILLRDRLF-AILADVPGLIPTGDKIHRLPHHLSFYLEAAD 301
G G AAEL +ET + LRDRL +LA +P GD RLP+ + + +
Sbjct: 244 GLGKAAELELIHIETAIKKETRLRDRLEQTLLAKIPDCEVNGDVTQRLPNTTNIGFKYIE 303
Query: 302 GEKISGKTLVRQLNLAGIGISAGAACNSGKLSPSPILLAMGYSQKAALGGIRLTLGKQTT 361
GE I + LN GI S+G+AC SG L PS +L AMG G IR +L + TT
Sbjct: 304 GEAI-----LLSLNKYGICASSGSACTSGSLEPSHVLRAMGLPYTTLHGSIRFSLCRYTT 358
Query: 362 AADIDWTGIVVKQILQRL 379
A ID V+ +I++RL
Sbjct: 359 EAQIDRVIEVMPEIVERL 376
>Ava_0437 Aromatic amino acid beta-eliminating lyase/threonine aldolase
Length = 388
Score = 291 bits (744), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 163/370 (44%), Positives = 230/370 (62%), Gaps = 13/370 (3%)
Query: 3 VYLDYSATTPTRPEAIAIIQTILTQQWGNPSSL-HEWGNRAALILETARMQVAGLINAVP 61
+YLD ATTP + +A + T+++GNP+S+ H +G A ++ AR +A INA P
Sbjct: 6 IYLDCHATTPLDEQVLAAMLPYFTEKFGNPASIGHIYGWEAEAAVKQAREILAAAINASP 65
Query: 62 ESIIFTSGGTEADNLAIMGVARCYTTP-QHMIISSVEHSAISEPAKMLENWGWEITRLGV 120
E I+FTSG TEA+NLAI GVA Y QH+I + EH A+ +P + L+ G+EIT L V
Sbjct: 66 EEIVFTSGATEANNLAIKGVAEAYFQKGQHIITVATEHHAVLDPCEYLKTLGFEITILPV 125
Query: 121 NHQGRVNPEDLKAALRHNTVLVSVIYGQSEIGTVQPIAELGKITKTHGALFHTDAVQVAG 180
G ++ L+ ALR T+LVSV+ +EIG +QP+AE+G+I ++H +FHTDA Q G
Sbjct: 126 QADGLIDLAQLEKALRPETILVSVMAANNEIGVLQPLAEIGEICRSHNIIFHTDAAQAIG 185
Query: 181 RLPLDVQTLPVDLLSLSSHKLYGGLGAGALYLR---PGVELMPLLGGGGQENGLRSGTQA 237
++PLDVQ + +DL+SL++HK+YG G GALY+R P V+L P GGG E G+RSGT
Sbjct: 186 KIPLDVQAMNIDLMSLTAHKVYGPKGIGALYVRRRNPRVQLAPQQHGGGHERGMRSGTLY 245
Query: 238 TPAIAGFGVAAELAAQELETETGRLILLRDRLFAILADVPGLIPTGDKIHRLPHHLSFYL 297
TP I GF A E+A E E RL LRDRL++ LA + G+ G RL +L+ +
Sbjct: 246 TPQIVGFAKAVEIALAEQTMENQRLTQLRDRLWSQLAQLEGIHLNGHPTQRLAGNLNISI 305
Query: 298 EAADGEKISGKTLVRQLNLAG-IGISAGAACNSGKLSPSPILLAMGYSQKAALGGIRLTL 356
E DG + QL L + +S+G+AC+S K +PS +L A+G +K A IR +
Sbjct: 306 EGVDGAAL-------QLGLQPVVAVSSGSACSSTKTAPSHVLTALGSPEKLAYASIRFGI 358
Query: 357 GKQTTAADID 366
G+ TA +ID
Sbjct: 359 GRFNTAEEID 368
>Ava_4245 Aromatic amino acid beta-eliminating lyase/threonine aldolase
Length = 398
Score = 256 bits (655), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 155/378 (41%), Positives = 220/378 (58%), Gaps = 7/378 (1%)
Query: 3 VYLDYSATTPTRPEAIAIIQTILTQQWGNPSSLHEWGNRAALILETARMQVAGLINAVPE 62
+YLD +ATT E +A + LT+ +GNPSS+H +G + ++ AR QVA L+ A
Sbjct: 4 IYLDNNATTQVDAEVLAAMLPYLTEFYGNPSSMHTFGGQVGKAVQQARGQVAFLLGAEES 63
Query: 63 SIIFTSGGTEADNLAIMGVARCYTTPQHMIISSVEHSAISEPAKMLENWGWEITRLGVNH 122
IIFTS GTE +N AI +H+I + VEH+AI K LE G+++T L V+
Sbjct: 64 EIIFTSCGTEGNNAAIKAALAAQPEKRHIITTQVEHAAIINVCKQLEKQGYKVTYLSVDS 123
Query: 123 QGRVNPEDLKAALRHNTVLVSVIYGQSEIGTVQPIAELGKITKTHGALFHTDAVQVAGRL 182
QG+++ +L+AAL +T LVS +Y +E G V PI ++G K GA+FH DAVQ G++
Sbjct: 124 QGQIDLLELEAALTGDTALVSTMYANNETGVVFPIEQIGLRAKDAGAIFHVDAVQAVGKV 183
Query: 183 PLDVQTLPVDLLSLSSHKLYGGLGAGALYLRPGVELMPLLGGGGQENGLRSGTQATPAIA 242
PL+++T +D+L+LS HKL+ G GALY+R GV PLL GG QE G R+GT+ P +
Sbjct: 184 PLNLKTSSIDMLTLSGHKLHAPKGIGALYIRRGVRFRPLLVGGHQERGRRAGTENVPGMI 243
Query: 243 GFGVAAELAAQELETETGRLILLRDRLF-AILADVPGLIPTGDKIHRLPHHLSFYLEAAD 301
G AAELA L+ + R LRDRL +L+ +P G RL + + + +
Sbjct: 244 ALGKAAELAQIHLK-DVKREKALRDRLEQGLLSAIPNTEVNGHPTSRLSNTTNIGFKYIE 302
Query: 302 GEKISGKTLVRQLNLAGIGISAGAACNSGKLSPSPILLAMGYSQKAALGGIRLTLGKQTT 361
GE I + LN GI S+G+AC SG L S +L AMG G IR +L + TT
Sbjct: 303 GEAI-----LLSLNKYGICASSGSACTSGSLESSHVLRAMGLPYTILHGSIRFSLSRYTT 357
Query: 362 AADIDWTGIVVKQILQRL 379
A+ID ++ I++RL
Sbjct: 358 EAEIDKVLQLMPPIVERL 375
>Ava_B0304 Aminotransferase, class V
Length = 395
Score = 204 bits (519), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/382 (33%), Positives = 202/382 (52%), Gaps = 12/382 (3%)
Query: 3 VYLDYSATTPTRPEAIAIIQTILTQQWGNPSSL-HEWGNRAALILETARMQVAGLINAVP 61
+Y DY +TTP ++ +T ++GN SS+ H +G+ A + A + VA L+ A
Sbjct: 13 IYFDYHSTTPVDQRVAEMLLHYMTTEFGNASSIDHIYGDMAKEAVAQASVNVANLVGASS 72
Query: 62 ESIIFTSGGTEADNLAIMGVARCYTTPQ---HMIISSVEHSAISEPAKMLENWGW-EITR 117
+ +IFTSG TE+ NL I + + + + VEH A+ + M+ +I
Sbjct: 73 KEVIFTSGATESINLVIQSNVSNNNSTKIRPRIAVLPVEHKAVLDTCNMIAKKNLADIIN 132
Query: 118 LGVNHQGRVNPEDLKAALRHNTVLVSVIYGQSEIGTVQPIAELGKITKTHGALFHTDAVQ 177
L ++ +GR+N + L L+ ++ +EIG + PI E+G+I + + F DA Q
Sbjct: 133 LQIDSKGRLNLDFLNKICDSGISLICIMAANNEIGNIYPIQEIGQIARKYNIPFLCDASQ 192
Query: 178 VAGRLPLDVQTLPVDLLSLSSHKLYGGLGAGALYLRPGVELMPLLGGGGQENGLRSGTQA 237
G++P++ + + L+LS+HKLYG G+GAL +R G +L P+L GGG + GLRSGT
Sbjct: 193 AVGKIPINFEEWGITYLALSAHKLYGPKGSGALVVRKGHQLNPILFGGGHQKGLRSGTLN 252
Query: 238 TPAIAGFGVAAELAAQELETETGRLILLRDRLFAILAD-VPGLIPTGDKIHRLPHHLSFY 296
P I G G A L E++ + + LRD+L +L D VPGL+ GD +RL +L
Sbjct: 253 VPGIVGLGEACRLRILEMDEDEKAIANLRDKLQNLLLDKVPGLVINGDVNNRLSGNLHIS 312
Query: 297 LEAADGEKISGKTLVRQLNLAGIGISAGAACNSGKLSPSPILLAMGYSQKAALGGIRLTL 356
+ I + VRQ + IS GAAC+SG +PS +L AM G +R+ +
Sbjct: 313 IPDVSNSAIIAR--VRQ----KLAISTGAACSSGVQAPSHVLQAMDLPTDIIDGALRIGI 366
Query: 357 GKQTTAADIDWTGIVVKQILQR 378
GK T +I+ ++ +Q+
Sbjct: 367 GKFTKLEEIEQAAEILSLAVQQ 388
>Ava_0427 cysteine desulfurase
Length = 420
Score = 87.0 bits (214), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 110/230 (47%), Gaps = 5/230 (2%)
Query: 3 VYLDYSATTPTRPEAIAIIQTILTQQWGN-PSSLHEWGNRAALILETARMQVAGLINAVP 61
VYLD +AT+ + ++ Q N H +A E AR ++A INA
Sbjct: 30 VYLDNAATSQKPLFVLNALRDYYEQYNSNVHRGAHTLSAKATDAYEGARDKIAKFINAAS 89
Query: 62 -ESIIFTSGGTEADNL-AIMGVARCYTTPQHMIISSVEHSAISEPAKML-ENWGWEITRL 118
+ I++T +EA NL A +I+S +EH + P + + + G + +
Sbjct: 90 RQEIVYTRNASEAINLVAYSWGMNNLQAGDEIILSVMEHHSNIVPWQFVAQKTGAVLKFV 149
Query: 119 GVNHQGRVNPEDLKAALRHNTVLVSVIYGQSEIGTVQPIAELGKITKTHGALFHTDAVQV 178
+ + ++ E K + T LVS+++ + +G + P+AE+ +IT +GA F DA Q
Sbjct: 150 ELTPEQTLDMEQFKQLISEKTKLVSIVHVSNTLGCINPVAEIAEITHRYGAKFLVDACQS 209
Query: 179 AGRLPLDVQTLPVDLLSLSSHKLYGGLGAGALYLRPG-VELMPLLGGGGQ 227
+P+DVQ + D L S HK+ G G LY + +E MP GGG+
Sbjct: 210 VPHMPIDVQQIDCDWLVASGHKMCAPTGIGFLYGKLALLEAMPPFFGGGE 259
>Ava_4866 Aminotransferase, class V
Length = 401
Score = 73.2 bits (178), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 104/222 (46%), Gaps = 10/222 (4%)
Query: 2 QVYLDYSATTPTRPEAIAIIQTILT--QQWGNPSSLHEWGNRAALILETARMQVAGLINA 59
+ Y +Y P A+ II L QQ G + E GN + R +A +NA
Sbjct: 33 KTYFNYGGQGPMPQGAMDIITQSLAYIQQIGPFGT--EAGNWITKQTQAVREAIASELNA 90
Query: 60 VPESIIFTSGGTEADNLAIMGVARCYTTPQHMIISSVEHS-AISEPAKMLENWGWEITRL 118
++I FT T N+A+ G+ + H+++S EH I+ ++ +G E+T
Sbjct: 91 SSDTITFTDNVTVGCNIALWGIP--WQAGDHILLSDCEHPGVIAATQEISRRFGVEVTTC 148
Query: 119 GVNHQGRV-NPEDLKAA-LRHNTVLVSVIYGQSEIGTVQPIAELGKITKTHGALFHTDAV 176
+ V P + A LR NT LV + + G V P+ ++ ++ + + +L DA
Sbjct: 149 PLKATLNVGEPTAIIAQNLRKNTRLVVLSHVFWNTGQVLPLDKIVEVCRNNNSLLLVDAA 208
Query: 177 QVAGRLPLDVQTLPVDLLSLSSHK-LYGGLGAGALYLRPGVE 217
Q G LPL++ L VD + + HK L G G G LY+RP V
Sbjct: 209 QSVGALPLNLTELGVDFYAFTGHKWLCGPEGVGGLYVRPEVR 250
>Ava_1826 Cysteine desulfurase related protein
Length = 457
Score = 59.7 bits (143), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 82/202 (40%), Gaps = 1/202 (0%)
Query: 3 VYLDYSATTPTRPEAIAIIQTILTQQWGNPSSLHEWGNRAALILETARMQVAGLINAVPE 62
++ D T + I L + N R ++ AR +A + +
Sbjct: 26 IFFDGPGGTQVPGSVLDAISDYLVRSNANAHGAFATSARTDALIIAARTAIADFLGCHSD 85
Query: 63 SIIFTSGGTEADNLAIMGVARCYTTPQHMIISSVEHSAISEPAKMLENWGWEITRLGVN- 121
++F + T + R +I++ ++HSA + L G I + V
Sbjct: 86 EVVFGANMTTLTFSLSRAIGRTLQPGDEIIVTRLDHSANVSSWEALAEQGAVIRYVDVKV 145
Query: 122 HQGRVNPEDLKAALRHNTVLVSVIYGQSEIGTVQPIAELGKITKTHGALFHTDAVQVAGR 181
++ DL+ + T LV+V Y + +GT+ IA + K+ GAL DAV A
Sbjct: 146 DDCTLDMNDLEQQINSRTKLVAVTYASNAVGTINDIAAIVKLAHAVGALVFVDAVHYAPH 205
Query: 182 LPLDVQTLPVDLLSLSSHKLYG 203
++V L D L+ S++K +G
Sbjct: 206 GTINVHALGCDFLACSAYKFFG 227
>Ava_5058 alanine-glyoxylate aminotransferase apoenzyme
Length = 381
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 129 EDLKAALRHNT-VLVSVIYGQSEIGTVQPIAELGKITKTHGALFHTDAVQVAGRLPLDVQ 187
E+L+ AL +N ++++++ ++ G QP+ +G++ + G L D V G +P+ +
Sbjct: 137 EELRTALENNRPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLGGVPIFLD 196
Query: 188 TLPVDLLSLSSHKLYGGLGA 207
VDL S K GLG
Sbjct: 197 GWGVDLAYSCSQK---GLGC 213
>Ava_2838 L-2,4-diaminobutyrate decarboxylase
Length = 522
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 71/180 (39%), Gaps = 32/180 (17%)
Query: 65 IFTSGGTEADNLAIMGVARCYTTPQ-----------------HMIISSVEHSAISEPAKM 107
IFTSGGT+++ + ++ Y Q ++ S V H IS+ A +
Sbjct: 163 IFTSGGTQSNFMGLLLARDAYAHRQLNWCVQQQGLPPEAQRFRILCSQVAHFTISQAASL 222
Query: 108 LENWGWEITRLGVNHQGRVNPEDLKAALRHNT------VLVSVIYGQSEIGTVQPIAELG 161
L + + + ++ D++ L + + G ++ G++ + EL
Sbjct: 223 LGLGQQAVVAVETDSDYQLCAADVEQKLEQLQQQDLLPIALVATAGTTDFGSIDKLPELA 282
Query: 162 KITKTHGALFHTDA-------VQVAGRLPLDVQTLPVDLLSLSSHKL-YGGLGAGALYLR 213
+ +G FH DA + R LD L D +++ HKL Y + GA ++
Sbjct: 283 ACAEKYGLWFHVDAAFGGALVMSDRHRDKLDGIAL-ADSITVDFHKLFYQPISCGAFLVK 341
>Ava_5047 thiamine-phosphate diphosphorylase
Length = 379
Score = 29.6 bits (65), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 16/131 (12%)
Query: 157 IAELGKITKTHGALFHTDAVQVAGRLPLDVQTLPVDLLSLSSHKLYGGLGAGALYL--RP 214
+ E ++ + +G L+H Q ++ V +L +L+ H+L L LYL P
Sbjct: 129 VEEALRVLEEYGKLYHPKMGQACKQMRYRVYSLETNLMGHQRHQL---LRRSRLYLVTSP 185
Query: 215 GVELMPLLGGGGQENGLRSG---TQATPAIAGFGVAAELAAQ--ELETETGRLILLRDRL 269
L+P + E L+ G Q A V ELA + +L G L ++ DR+
Sbjct: 186 SESLLPTV-----EAALKGGLTLLQYRDKDADDSVRLELATKLRQLCHSYGALFIINDRV 240
Query: 270 -FAILADVPGL 279
A+ D G+
Sbjct: 241 DLALAVDADGV 251
Database: GCA_000204075.1P
Posted date: Aug 27, 2016 11:05 PM
Number of letters in database: 1,938,322
Number of sequences in database: 5706
Lambda K H
0.318 0.135 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5706
Number of Hits to DB: 1,477,756
Number of extensions: 63086
Number of successful extensions: 227
Number of sequences better than 1.0: 11
Number of HSP's gapped: 212
Number of HSP's successfully gapped: 11
Length of query: 382
Length of database: 1,938,322
Length adjustment: 88
Effective length of query: 294
Effective length of database: 1,436,194
Effective search space: 422241036
Effective search space used: 422241036
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)