BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= AA650_17280 cysteine desulfurase
(382 letters)
Database: GCA_000015665.1P
1906 sequences; 501,754 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
P9515_01991 NifS-like aminotransferase class-V 215 9e-67
P9515_09691 possible cysteine desulfurase (class-V aminotransfer... 166 2e-48
P9515_00791 putative cysteine desulfurase or selenocysteine lyase 103 6e-26
P9515_10021 spt serine:pyruvate/alanine:glyoxylate aminotransferase 39 1e-04
P9515_11651 petH ferredoxin-NADP oxidoreductase (FNR) 28 0.41
>P9515_01991 NifS-like aminotransferase class-V
Length = 381
Score = 215 bits (548), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 129/370 (34%), Positives = 200/370 (54%), Gaps = 14/370 (3%)
Query: 3 VYLDYSATTPTRPEAIAIIQTILTQQWGNPSSLHEW-GNRAALILETARMQVAGLINAVP 61
+ LDY ++TP + + + + + N SS G A+ ILE +R ++ +
Sbjct: 6 ILLDYQSSTPCLEDVVNSMSPYWREIFANTSSKSNLAGINASAILEVSREKIQEYLCLKK 65
Query: 62 ESIIFTSGGTEADNLAIMGVARCYTTPQ----HMIISSVEHSAISEPAKMLENWGWEITR 117
+ +IFTSG TE++NLA++G AR + H+I EH A+ EP L G+ IT
Sbjct: 66 KKVIFTSGATESNNLALLGFARNFYKETKSYGHIITLKTEHKAVLEPLDQLRKEGFHITA 125
Query: 118 LGVNHQGRVNPEDLKAALRHNTVLVSVIYGQSEIGTVQPIAELGKITKTHGALFHTDAVQ 177
+ G ++ E + +R +T LVS++ +EIG +QP+ E+ +I K+ + H+D Q
Sbjct: 126 ITPEKDGLISKEKFMSFIRDDTFLVSIMMANNEIGVIQPLKEISEICKSREIILHSDYAQ 185
Query: 178 VAGRLPLDVQTLPVDLLSLSSHKLYGGLGAGALYLRPGVELMPLLGGGGQENGLRSGTQA 237
G L LD ++L++SSHK+YG G G L + +EL PL GGGQE GLRSGT
Sbjct: 186 CLGSLELDNLDSVANMLTISSHKIYGPKGVGLLLIDRDIELQPLFFGGGQEFGLRSGTLP 245
Query: 238 TPAIAGFGVAAELAAQELETETGRLILLRDRLF-AILADVPGLIPTGDKIHRLPHHLSFY 296
I GF A E+A + + + RD+L +L + G+ G RLPH+L+
Sbjct: 246 LALIVGFTKAIEIAVFNQKKNAEKFLFYRDKLLHGLLVNNSGVEINGSMKERLPHNLNLT 305
Query: 297 LEAADGEKISGKTLVRQLNLAGIGISAGAACNSGKLSPSPILLAMGYSQKAALGGIRLTL 356
+ +G K+ KTL + I S+G+AC +G+ PS +LLA+G S K A +RL++
Sbjct: 306 VLDVNGSKLH-KTLKSK-----IICSSGSACGNGE--PSHVLLALGRSFKEAEASLRLSI 357
Query: 357 GKQTTAADID 366
G TT+ DI+
Sbjct: 358 GLMTTSEDIE 367
>P9515_09691 possible cysteine desulfurase (class-V aminotransferase family)
Length = 344
Score = 166 bits (419), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 176/347 (50%), Gaps = 14/347 (4%)
Query: 44 LILETARMQVAGLINAVPESIIFTSGGTEADNLAIMGVARCYTTPQHMIISSVEHSAISE 103
+ LE R ++A ++NA E IIFTSG +E+ ++ ++ Y + ++IS VEH A
Sbjct: 1 MYLEKTRQKIAEILNAEIEDIIFTSGSSESTSIVFSNLSDRYKRGR-VVISKVEHQATII 59
Query: 104 PAKMLENWGWEITRLGVNHQGRVNPEDLKAALRHNTVLVSVIYGQSEIGTVQPIAELGKI 163
A L+ GW+I VNH G +N ++ +++NT LVS+I+GQSEIG++QP+ +G
Sbjct: 60 SANKLKRKGWDIYEWPVNHDGIINISEVDEVIKNNTNLVSIIWGQSEIGSLQPVQLIGTK 119
Query: 164 TKTHGALFHTDAVQVAGRLPLDVQTLPVDLLSLSSHKLYGGLGAGALYLRPGVELMPLLG 223
K LFH D Q+ + + L DLLSLS+HK G G G L L
Sbjct: 120 CKELDILFHIDGTQILSNGIFNWKELKCDLLSLSAHKFGGPKGIGLLLTNSKSR--SFLK 177
Query: 224 GGG----QENGLRSGTQATPAIAGFGVAAE-------LAAQELETETGRLILLRDRLFAI 272
QE +R GT P IAG + + ++ + + + +L++ +
Sbjct: 178 NKDISLTQEYQIRQGTTPLPLIAGMYQSIKNIKGRISFSSDKTVFDLNKNEILKNYFISK 237
Query: 273 LADVPGLIPTGDKIHRLPHHLSFYLEAADGEKISGKTLVRQLNLAGIGISAGAACNSGKL 332
+ ++P + TG RLP+H+SF L + E I ++ ++ + IS+G+AC+S
Sbjct: 238 INNIPNIKITGSYTQRLPNHISFILFNSQREPIKAYKVINYMSDNNVEISSGSACSSSSG 297
Query: 333 SPSPILLAMGYSQKAALGGIRLTLGKQTTAADIDWTGIVVKQILQRL 379
PS IL MGY IR++LG +D+D +++ +++
Sbjct: 298 KPSQILENMGYDSNQLYSNIRVSLGSMNKKSDLDRLFELIQNCIKKF 344
>P9515_00791 putative cysteine desulfurase or selenocysteine lyase
Length = 425
Score = 103 bits (257), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 171/398 (42%), Gaps = 60/398 (15%)
Query: 3 VYLDYSATTPTRPEAIAIIQTILTQQWGNPSS-LHEWGNRAALILETARMQVAGLINA-V 60
+YLD++ATT + + I+ + N H+ +A E +R VA INA
Sbjct: 37 IYLDHAATTQKPSQVLEKIEEYYKKFNANVHRGAHQLSAKATEEFENSRSLVAKYINANS 96
Query: 61 PESIIFTSGGTEADNLAIMGVARCY-----TTPQHMIISSVEHSAISEPAKMLENWG-WE 114
+ IIFT TEA NL VAR + +I+S +EH + P +M+ +
Sbjct: 97 TQEIIFTRNATEAINL----VARSWGEFTLKENDEIILSVMEHHSNIVPWQMVAAKNQCK 152
Query: 115 ITRLGVNHQGRVNPEDLKAALRHNTVLVSVIYGQSEIGTVQPIAELGKITKTHGALFHTD 174
+ +G++ G+++ D K+ L + T LVS+++ + +G PI E+ K+ K G+L D
Sbjct: 153 LKFVGIDQDGKLDINDFKSKLTNKTKLVSLLHISNTLGCCNPIKEITKLAKVKGSLVLLD 212
Query: 175 AVQVAGRLPLDVQTLPVDLLSLSSHKLYGGLGAGALYLRPGV--ELMPLLGGGGQENGLR 232
A Q LD+ L +D L+ S HKL G G G L+ + + E+ P GGG +
Sbjct: 213 ACQSLAHQKLDIDELGIDFLAGSGHKLCGPTGIGFLWAKKEILEEIPPFFGGGEMIQDVF 272
Query: 233 SGTQA-----------TPAIA-GFGVAAELAA---------QELETETGRLILLRDRLFA 271
T TPAIA G+A + E E + + LF
Sbjct: 273 EDTSTWAELPHKFEAGTPAIAEAIGLAEAIKYINNIGLDRISEYEKQITKY------LFE 326
Query: 272 ILADVPGLIPTGDKIHRLPHHLS---FYLEAADGEKISGKTLVRQLNLAGIGISAGAACN 328
L+ + L+ G P+ S FY++ I + L+ GI I +G C
Sbjct: 327 QLSQIKDLVIIGPPPKIDPNRASLATFYIKG-----IHSNDIAEILDSKGICIRSGHHC- 380
Query: 329 SGKLSPSPILLAMGYSQKAALGGIRLTLGKQTTAADID 366
P+ +G + A R+++ TT DI+
Sbjct: 381 -----CQPLHRHIGVNSTA-----RVSMNFTTTKDDIN 408
>P9515_10021 spt serine:pyruvate/alanine:glyoxylate aminotransferase
Length = 394
Score = 39.3 bits (90), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 11/112 (9%)
Query: 129 EDLKAALRHNT-VLVSVIYGQSEIGTVQPIAELGKITKTHGALFHTDAVQVAGRLPLDVQ 187
E++K + N + ++++ ++ G +QP+ +G + + + LF DAV G L L +
Sbjct: 140 EEIKYEIETNKPAIFAIVHAETSTGVLQPLEGIGDLCRENNCLFLVDAVTSLGALELYID 199
Query: 188 TLPVDLLSLSSHKLYGGLGAGALYLRPGVELMPLLGGGGQENGLRSGTQATP 239
+DL S K L PG L P E+ L S + P
Sbjct: 200 KWKIDLAYSCSQK--------GLSCPPG--LSPFTMNKRAEDKLSSRSSKVP 241
>P9515_11651 petH ferredoxin-NADP oxidoreductase (FNR)
Length = 384
Score = 28.1 bits (61), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 278 GLIPTGDKIHRLPHHLSFYLEAA--DGEKISGKTL---VRQLNLAGIGISAGAACNS 329
G++P G+ + PH L Y A+ G+ G T+ VRQL G + C++
Sbjct: 145 GIMPVGEDANGKPHKLRLYSIASTRHGDDFEGNTVSLCVRQLQYEKDGETINGVCST 201
Database: GCA_000015665.1P
Posted date: Aug 27, 2016 11:08 PM
Number of letters in database: 501,754
Number of sequences in database: 1906
Lambda K H
0.318 0.135 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1906
Number of Hits to DB: 335,024
Number of extensions: 13014
Number of successful extensions: 52
Number of sequences better than 1.0: 5
Number of HSP's gapped: 45
Number of HSP's successfully gapped: 5
Length of query: 382
Length of database: 501,754
Length adjustment: 78
Effective length of query: 304
Effective length of database: 353,086
Effective search space: 107338144
Effective search space used: 107338144
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)