BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= AA650_17280 cysteine desulfurase
(382 letters)
Database: GCA_000011385.1P
4431 sequences; 1,384,543 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gll4384 cysteine desulfurase 279 4e-90
glr1373 probable aminotransferase 91 8e-21
gll2601 probable aminotransferase 68 3e-13
gll2222 L-2,4-diaminobutyrate decarboxylase 36 0.005
gll0583 unknown protein 30 0.41
>gll4384 cysteine desulfurase
Length = 425
Score = 279 bits (713), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 161/383 (42%), Positives = 223/383 (58%), Gaps = 12/383 (3%)
Query: 3 VYLDYSATTPTRPEAIAIIQTILTQQWGNPSSL-HEWGNRAALILETARMQVAGLINAVP 61
+Y+D +ATTP P + ++ T+++GN +S H +G A +E AR Q+A + A P
Sbjct: 6 IYMDNNATTPVDPVVLEVMLPYFTEKFGNAASRNHAYGWEAEEAVENARAQIAAAVGADP 65
Query: 62 ESIIFTSGGTEADNLAIMGVARCYTTP-QHMIISSVEHSAISEPAKMLENWGWEITRLGV 120
+ IIFTSG TE++NLA+ GVA Y H+I EH I + AK LE G IT L V
Sbjct: 66 KEIIFTSGATESNNLALKGVAEVYREKGNHIITVVTEHKCILDSAKYLEQHGCRITYLPV 125
Query: 121 NHQGRVNPEDLKAALRHNTVLVSVIYGQSEIGTVQPIAELGKITKTHGALFHTDAVQVAG 180
G ++ +L+AA+ TVL+SV++ +EIG +QP+AE+ KI K+HG LFHTDA Q G
Sbjct: 126 KPDGLIDLAELEAAITPETVLISVMFANNEIGVIQPVAEIAKIAKSHGVLFHTDAAQALG 185
Query: 181 RLPLDVQTLPVDLLSLSSHKLYGGLGAGALYLR---PGVELMPLLGGGGQENGLRSGTQA 237
++P+DVQ L +DL+S+S HKLYG G GALY+R P V L L GGG E G+RSGT
Sbjct: 186 KVPIDVQALGIDLMSMSGHKLYGPKGIGALYVRRKNPRVRLEAQLHGGGHERGMRSGTLY 245
Query: 238 TPAIAGFGVAAELAAQELETETGRLILLRDRLFA-ILADVPGLIPTGDKIHRLPHHLSFY 296
P I G G AAE A Q LE E R LR+RL I + + G HRL +L+
Sbjct: 246 VPLIVGMGAAAERAVQNLEVEAARTRKLRERLLEQITGRLSEVYVNGSLEHRLSGNLNLS 305
Query: 297 LEAADGEKISGKTLVRQLNLAGIGISAGAACNSGKLSPSPILLAMGYSQKAALGGIRLTL 356
+GE L+ LN + +S+G+AC S L PS +L A+G + A +R +
Sbjct: 306 FAFVEGE-----ALLMGLN-DTVALSSGSACTSASLEPSYVLKALGVGDELAHSSLRFGI 359
Query: 357 GKQTTAADIDWTGIVVKQILQRL 379
G+ T DID T + +++ RL
Sbjct: 360 GRFNTEEDIDRTSAKIVEVVNRL 382
>glr1373 probable aminotransferase
Length = 417
Score = 90.5 bits (223), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 110/230 (47%), Gaps = 8/230 (3%)
Query: 3 VYLDYSATTPTRPEAI-AIIQTILTQQWGN-PSSLHEWGNRAALILETARMQVAGLINAV 60
VYLD +ATT +P+A+ I + T + N +H + E AR++V INA
Sbjct: 36 VYLDNAATT-QKPQAVLDAIAALYTGYYSNIHRGVHHLSQLSTEAHEQARIKVQQFINAQ 94
Query: 61 PE-SIIFTSGGTEADNLAIMGVARCYTTP-QHMIISSVEHSAISEPAKMLENWGWEITRL 118
+ I+F G TE NL R P ++IS++EH + P +ML I ++
Sbjct: 95 SDREIVFVRGCTEGINLVAQTFGRERVGPGDEIVISAMEHHSNIVPWQMLCQEKGAILKV 154
Query: 119 G-VNHQGRVNPEDLKAALRHNTVLVSVIYGQSEIGTVQPIAELGKITKTHGALFHTDAVQ 177
++ +G + E + L T LV+V++ + +GT+ P+A L ++ T G D Q
Sbjct: 155 APIDDRGEIILEAFEQLLGERTKLVAVVHLSNALGTINPVARLIELAHTRGIPVLVDGAQ 214
Query: 178 VAGRLPLDVQTLPVDLLSLSSHKLYGGLGAGALYLRPGV--ELMPLLGGG 225
+ +DVQ L D S HKLY G G LY + + + P GGG
Sbjct: 215 AVSHIAVDVQALDCDFYVFSGHKLYAPTGIGVLYGKAELLEAMSPWQGGG 264
>gll2601 probable aminotransferase
Length = 412
Score = 67.8 bits (164), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 82/162 (50%), Gaps = 5/162 (3%)
Query: 46 LETARMQVAGLINA-VPESIIFTSGGTEA-DNLAIMGVARCYTTPQHMIISSVEH-SAIS 102
L+ AR ++A +NA PE I+ S T+ NLA +A ++++ +H S I
Sbjct: 65 LDLARARMAAYLNAEYPEEIVHGSSTTQLLSNLA-AAMAPSLQPGDEIVVTDCDHESNIG 123
Query: 103 EPAKMLENWGWEITRLGVNHQG-RVNPEDLKAALRHNTVLVSVIYGQSEIGTVQPIAELG 161
++ G + +N + + PEDL+ L T LV Y + +GT+QP+A++
Sbjct: 124 PWVRLAHQRGLALKIWKINPETWTLEPEDLEMLLGERTRLVCFTYASNVVGTIQPVAQIV 183
Query: 162 KITKTHGALFHTDAVQVAGRLPLDVQTLPVDLLSLSSHKLYG 203
++ +GA DAV A +DV+ VD L+ S++K YG
Sbjct: 184 RLAHRYGARVCIDAVAYAPHRAIDVRATGVDFLTFSTYKTYG 225
>gll2222 L-2,4-diaminobutyrate decarboxylase
Length = 532
Score = 35.8 bits (81), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 36/214 (16%)
Query: 34 SLHEWGNR-AALILETARMQ-VAGLINAVPESIIFTSGGTEADNLAIMGVARCYTTPQHM 91
SL W AA I+E +Q + L A FTSGGT+++ + ++ +AR + H+
Sbjct: 133 SLDSWDQSPAATIVEQQIVQWLCRLYFAQAGDGTFTSGGTQSNFMGLL-LARDHYALTHL 191
Query: 92 ------------------IISSVEHSAISEPAKMLENWGWEITRLGVNHQGR---VNPED 130
+ S H + + A +L + +G + R V E
Sbjct: 192 DWNCEERGLPPGAERLRILCSQAAHFTVQKSAGLLGLGRASVVPVGPDSDYRLRGVAVER 251
Query: 131 LKAALRHN---TVLVSVIYGQSEIGTVQPIAELGKITKTHGALFHTDAVQVAGRLPLDVQ 187
A LR + + + G +++G++ +AEL + +THG H DA V G L L
Sbjct: 252 AIADLRRDGLSPIALVATAGTTDLGSIDAMAELAIVARTHGLWLHADAA-VGGALALSEH 310
Query: 188 TL-------PVDLLSLSSHKL-YGGLGAGALYLR 213
D +++ HKL Y + GA +R
Sbjct: 311 HRGLLAGIEAADSITVDFHKLFYQPISCGAFLVR 344
>gll0583 unknown protein
Length = 835
Score = 29.6 bits (65), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 27 QQWGNPSSLHEWGNRAALILETARMQVAGLINAVPESIIFTSG 69
+QWG P ++ G R L+ E AR+ +AGL V +S + G
Sbjct: 537 KQWGWPRAIE--GLRGRLLFEPARLTLAGLSARVGDSTVGVDG 577
Database: GCA_000011385.1P
Posted date: Aug 27, 2016 10:20 PM
Number of letters in database: 1,384,543
Number of sequences in database: 4431
Lambda K H
0.318 0.135 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4431
Number of Hits to DB: 1,129,804
Number of extensions: 51653
Number of successful extensions: 171
Number of sequences better than 1.0: 7
Number of HSP's gapped: 166
Number of HSP's successfully gapped: 7
Length of query: 382
Length of database: 1,384,543
Length adjustment: 86
Effective length of query: 296
Effective length of database: 1,003,477
Effective search space: 297029192
Effective search space used: 297029192
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)