CyanoBase Similarity Search (Genomes)

Enter Query Sequence

Select Program
  • BLASTN - search genome DNA sequence(s) using nucleotide query.
  • TBLASTN - search translated genome DNA sequence(s) using a protein query.

Options

Expectation value (E)
The statistical significance threshold for reporting matches against database sequences. Lower EXPECT thresholds are more stringent. (Example for higher stringency: 1E-5 or 1E-100, lower stringency: 100 or 1000) (-e)
Filter query sequence (DUST with blastn, SEG with others)
Number of database sequences to show one-line descriptions for (V)
Number of database sequence to show alignments for (B)
Show input data if checked
Show background/logo

(*) Sequences collected from Genbank

This database is compiled from sequences of bacteria to be of 3 Family (Bradyrhizobiaceae, Phyllobacteriaceae, Rhizobiaceae) and of 5 Genus (Methylobacterium, Azorhizobium, Devosia, Burkholderia, Ralstonia), containing the leguminous bacteria.

Select library

CyanoBase
''Nostoc azollae'' 0708
Acaryochloris marina MBIC11017
Acaryochloris sp. CCMEE 5410
Anabaena cylindrica PCC 7122
Anabaena sp. 90
Anabaena sp. PCC 7108
Anabaena sp. wa102
Anabaena variabilis ATCC 29413
Aphanizomenon flos-aquae 2012/KM1/D3
Aphanizomenon flos-aquae NIES-81
Aphanocapsa montana BDHKU210001
Arthrospira maxima CS-328
Arthrospira platensis C1
Arthrospira platensis NIES-39
Arthrospira platensis str. Paraca
Arthrospira sp. PCC 8005
Arthrospira sp. PCC 8005
Arthrospira sp. TJSD091
Calothrix sp. 336/3
Calothrix sp. PCC 6303
Calothrix sp. PCC 7103
Calothrix sp. PCC 7507
Candidatus Atelocyanobacterium thalassa isolate ALOHA
Candidatus Atelocyanobacterium thalassa isolate SIO64986
Candidatus Synechococcus spongiarum 142
Candidatus Synechococcus spongiarum 15L
Candidatus Synechococcus spongiarum SH4
Candidatus Synechococcus spongiarum SP3
Chamaesiphon minutus PCC 6605
Chlorobium tepidum TLS
Chlorogloeopsis fritschii PCC 6912
Chlorogloeopsis fritschii PCC 9212
Chroococcales cyanobacterium CENA595
Chroococcidiopsis thermalis PCC 7203
Chrysosporum ovalisporum
Coleofasciculus chthonoplastes PCC 7420
Crinalium epipsammum PCC 9333
Crocosphaera watsonii WH 0003
Crocosphaera watsonii WH 0005
Crocosphaera watsonii WH 0401
Crocosphaera watsonii WH 0402
Crocosphaera watsonii WH 8501
Crocosphaera watsonii WH 8502
Cyanobacterium aponinum PCC 10605
Cyanobacterium stanieri PCC 7202
Cyanobium gracile PCC 6307
Cyanobium sp. CACIAM 14
Cyanobium sp. PCC 7001
Cyanothece sp. ATCC 51142
Cyanothece sp. ATCC 51472
Cyanothece sp. CCY0110
Cyanothece sp. PCC 7424
Cyanothece sp. PCC 7425
Cyanothece sp. PCC 7822
Cyanothece sp. PCC 8801
Cyanothece sp. PCC 8802
Cylindrospermopsis raciborskii CS-505
Cylindrospermum stagnale PCC 7417
Dactylococcopsis salina PCC 8305
Dolichospermum circinale AWQC131C
Dolichospermum circinale AWQC310F
Fischerella muscicola PCC 7414
Fischerella muscicola SAG 1427-1 = PCC 73103
Fischerella sp. JSC-11
Fischerella sp. PCC 9339
Fischerella sp. PCC 9431
Fischerella sp. PCC 9605
Fischerella thermalis PCC 7521
Geitlerinema sp. PCC 7105
Geitlerinema sp. PCC 7407
Geminocystis herdmanii PCC 6308
Gloeobacter kilaueensis JS1
Gloeobacter violaceus PCC 7421
Gloeocapsa sp. PCC 73106
Gloeocapsa sp. PCC 7428
Halothece sp. PCC 7418
Hapalosiphon sp. MRB220
Hassallia byssoidea VB512170
Kamptonema formosum PCC 6407
Leptolyngbya boryana PCC 6306
Leptolyngbya sp. Heron Island J
Leptolyngbya sp. JSC-1
Leptolyngbya sp. KIOST-1
Leptolyngbya sp. PCC 6406
Leptolyngbya sp. PCC 7375
Leptolyngbya sp. PCC 7376
Limnoraphis robusta CS-951
Lyngbya aestuarii BL J
Lyngbya confervoides BDU141951
Lyngbya sp. PCC 8106
Mastigocladopsis repens PCC 10914
Mastigocladus laminosus UU774
Mastigocoleus testarum BC008
Mastigocoleus testarum BC008
Microchaete sp. PCC 7126
Microcoleus sp. PCC 7113
Microcoleus vaginatus FGP-2
Microcystis aeruginosa DIANCHI905
Microcystis aeruginosa NIES-2549
Microcystis aeruginosa NIES-44
Microcystis aeruginosa NIES-843
Microcystis aeruginosa PCC 7005
Microcystis aeruginosa PCC 7941
Microcystis aeruginosa PCC 9432
Microcystis aeruginosa PCC 9443
Microcystis aeruginosa PCC 9701
Microcystis aeruginosa PCC 9717
Microcystis aeruginosa PCC 9806
Microcystis aeruginosa PCC 9807
Microcystis aeruginosa PCC 9808
Microcystis aeruginosa PCC 9809
Microcystis aeruginosa SPC777
Microcystis aeruginosa TAIHU98
Microcystis panniformis FACHB-1757
Microcystis sp. T1-4
Moorea producens 3L
Myxosarcina sp. GI1
Neosynechococcus sphagnicola sy1
Nodosilinea nodulosa PCC 7104
Nodularia spumigena CCY9414
Nodularia spumigena CCY9414
Nostoc piscinale CENA21
Nostoc punctiforme PCC 73102
Nostoc sp. PCC 7107
Nostoc sp. PCC 7120
Nostoc sp. PCC 7524
Oscillatoria acuminata PCC 6304
Oscillatoria nigro-viridis PCC 7112
Oscillatoria sp. PCC 10802
Oscillatoriales cyanobacterium JSC-12
Phormidesmis priestleyi Ana
Phormidium sp. OSCR
Planktothricoides sp. SR001
Planktothrix agardhii NIVA-CYA 126/8
Planktothrix agardhii NIVA-CYA 15
Planktothrix agardhii NIVA-CYA 34
Planktothrix agardhii NIVA-CYA 56/3
Planktothrix mougeotii NIVA-CYA 405
Planktothrix prolifica NIVA-CYA 406
Planktothrix prolifica NIVA-CYA 540
Planktothrix prolifica NIVA-CYA 98
Planktothrix rubescens NIVA-CYA 407
Pleurocapsa sp. PCC 7319
Pleurocapsa sp. PCC 7327
Prochlorococcus marinus
Prochlorococcus marinus
Prochlorococcus marinus
Prochlorococcus marinus
Prochlorococcus marinus
Prochlorococcus marinus bv. HNLC1
Prochlorococcus marinus bv. HNLC2
Prochlorococcus marinus str. AS9601
Prochlorococcus marinus str. EQPAC1
Prochlorococcus marinus str. GP2
Prochlorococcus marinus str. LG
Prochlorococcus marinus str. MIT 9107
Prochlorococcus marinus str. MIT 9116
Prochlorococcus marinus str. MIT 9123
Prochlorococcus marinus str. MIT 9201
Prochlorococcus marinus str. MIT 9202
Prochlorococcus marinus str. MIT 9211
Prochlorococcus marinus str. MIT 9215
Prochlorococcus marinus str. MIT 9301
Prochlorococcus marinus str. MIT 9302
Prochlorococcus marinus str. MIT 9303
Prochlorococcus marinus str. MIT 9311
Prochlorococcus marinus str. MIT 9312
Prochlorococcus marinus str. MIT 9313
Prochlorococcus marinus str. MIT 9314
Prochlorococcus marinus str. MIT 9321
Prochlorococcus marinus str. MIT 9322
Prochlorococcus marinus str. MIT 9401
Prochlorococcus marinus str. MIT 9515
Prochlorococcus marinus str. NATL1A
Prochlorococcus marinus str. NATL2A
Prochlorococcus marinus str. PAC1
Prochlorococcus marinus str. SB
Prochlorococcus marinus str. SS2
Prochlorococcus marinus str. SS35
Prochlorococcus marinus str. SS51
Prochlorococcus marinus subsp. marinus str. CCMP1375
Prochlorococcus marinus subsp. pastoris str. CCMP1986
Prochlorococcus sp. MIT 0601
Prochlorococcus sp. MIT 0602
Prochlorococcus sp. MIT 0603
Prochlorococcus sp. MIT 0604
Prochlorococcus sp. MIT 0701
Prochlorococcus sp. MIT 0702
Prochlorococcus sp. MIT 0703
Prochlorococcus sp. MIT 0801
Prochlorococcus sp. SS52
Prochlorococcus sp. W10
Prochlorococcus sp. W11
Prochlorococcus sp. W12
Prochlorococcus sp. W2
Prochlorococcus sp. W3
Prochlorococcus sp. W4
Prochlorococcus sp. W5
Prochlorococcus sp. W6
Prochlorococcus sp. W7
Prochlorococcus sp. W8
Prochlorococcus sp. W9
Prochlorococcus sp. scB241_526B17
Prochlorococcus sp. scB241_526B19
Prochlorococcus sp. scB241_526B22
Prochlorococcus sp. scB241_526D20
Prochlorococcus sp. scB241_526K3
Prochlorococcus sp. scB241_526N5
Prochlorococcus sp. scB241_526N9
Prochlorococcus sp. scB241_527E14
Prochlorococcus sp. scB241_527E15
Prochlorococcus sp. scB241_527G5
Prochlorococcus sp. scB241_527I9
Prochlorococcus sp. scB241_527L15
Prochlorococcus sp. scB241_527L16
Prochlorococcus sp. scB241_527L22
Prochlorococcus sp. scB241_527N11
Prochlorococcus sp. scB241_527P5
Prochlorococcus sp. scB241_528J14
Prochlorococcus sp. scB241_528J8
Prochlorococcus sp. scB241_528K19
Prochlorococcus sp. scB241_528N17
Prochlorococcus sp. scB241_528N20
Prochlorococcus sp. scB241_528N8
Prochlorococcus sp. scB241_528O2
Prochlorococcus sp. scB241_528P14
Prochlorococcus sp. scB241_528P18
Prochlorococcus sp. scB241_529B19
Prochlorococcus sp. scB241_529C4
Prochlorococcus sp. scB241_529D18
Prochlorococcus sp. scB241_529J11
Prochlorococcus sp. scB241_529J15
Prochlorococcus sp. scB241_529J16
Prochlorococcus sp. scB241_529O19
Prochlorococcus sp. scB243_495D8
Prochlorococcus sp. scB243_495G23
Prochlorococcus sp. scB243_495I8
Prochlorococcus sp. scB243_495K23
Prochlorococcus sp. scB243_495L20
Prochlorococcus sp. scB243_495N16
Prochlorococcus sp. scB243_495N3
Prochlorococcus sp. scB243_495N4
Prochlorococcus sp. scB243_495P20
Prochlorococcus sp. scB243_496A2
Prochlorococcus sp. scB243_496E10
Prochlorococcus sp. scB243_496G15
Prochlorococcus sp. scB243_496M6
Prochlorococcus sp. scB243_496N4
Prochlorococcus sp. scB243_497E17
Prochlorococcus sp. scB243_497I20
Prochlorococcus sp. scB243_497J18
Prochlorococcus sp. scB243_497N18
Prochlorococcus sp. scB243_498A3
Prochlorococcus sp. scB243_498B22
Prochlorococcus sp. scB243_498B23
Prochlorococcus sp. scB243_498C16
Prochlorococcus sp. scB243_498F21
Prochlorococcus sp. scB243_498G3
Prochlorococcus sp. scB243_498I20
Prochlorococcus sp. scB243_498J20
Prochlorococcus sp. scB243_498L10
Prochlorococcus sp. scB243_498M14
Prochlorococcus sp. scB243_498N4
Prochlorococcus sp. scB243_498N8
Prochlorococcus sp. scB243_498P15
Prochlorococcus sp. scB243_498P3
Prochlorococcus sp. scB245a_518A17
Prochlorococcus sp. scB245a_518A6
Prochlorococcus sp. scB245a_518D8
Prochlorococcus sp. scB245a_518E10
Prochlorococcus sp. scB245a_518I6
Prochlorococcus sp. scB245a_518J7
Prochlorococcus sp. scB245a_518K17
Prochlorococcus sp. scB245a_518O7
Prochlorococcus sp. scB245a_519A13
Prochlorococcus sp. scB245a_519B7
Prochlorococcus sp. scB245a_519C7
Prochlorococcus sp. scB245a_519D13
Prochlorococcus sp. scB245a_519E23
Prochlorococcus sp. scB245a_519G16
Prochlorococcus sp. scB245a_519L21
Prochlorococcus sp. scB245a_519O11
Prochlorococcus sp. scB245a_519O21
Prochlorococcus sp. scB245a_520B18
Prochlorococcus sp. scB245a_520D2
Prochlorococcus sp. scB245a_520E22
Prochlorococcus sp. scB245a_520F22
Prochlorococcus sp. scB245a_520K10
Prochlorococcus sp. scB245a_520M11
Prochlorococcus sp. scB245a_521A19
Prochlorococcus sp. scB245a_521B10
Prochlorococcus sp. scB245a_521C8
Prochlorococcus sp. scB245a_521K15
Prochlorococcus sp. scB245a_521M10
Prochlorococcus sp. scB245a_521N3
Prochlorococcus sp. scB245a_521N5
Prochlorococcus sp. scB245a_521O20
Prochlorococcus sp. scB245a_521O23
Prochloron didemni P2-Fiji
Prochloron didemni P3-Solomon
Prochloron didemni P4-Papua_New_Guinea
Prochlorothrix hollandica PCC 9006
Prochlorothrix hollandica PCC 9006
Pseudanabaena biceps PCC 7429
Pseudanabaena sp. ''Roaring Creek''
Pseudanabaena sp. PCC 6802
Pseudanabaena sp. PCC 7367
Raphidiopsis brookii D9
Rhodopseudomonas palustris CGA009
Richelia intracellularis
Richelia intracellularis HH01
Richelia intracellularis HM01
Rivularia sp. PCC 7116
Rubidibacter lacunae KORDI 51-2
Scytonema hofmanni PCC 7110
Scytonema millei VB511283
Scytonema tolypothrichoides VB-61278
Spirulina subsalsa PCC 9445
Stanieria cyanosphaera PCC 7437
Synechococcus elongatus PCC 6301
Synechococcus elongatus PCC 7942
Synechococcus sp. BL107
Synechococcus sp. CB0101
Synechococcus sp. CB0205
Synechococcus sp. CC9311
Synechococcus sp. CC9605
Synechococcus sp. CC9616
Synechococcus sp. CC9902
Synechococcus sp. GFB01
Synechococcus sp. JA-2-3B''a(2-13)
Synechococcus sp. JA-3-3Ab
Synechococcus sp. KORDI-100
Synechococcus sp. KORDI-49
Synechococcus sp. KORDI-52
Synechococcus sp. NKBG042902
Synechococcus sp. NKBG15041c
Synechococcus sp. PCC 6312
Synechococcus sp. PCC 7002
Synechococcus sp. PCC 7335
Synechococcus sp. PCC 7336
Synechococcus sp. PCC 7502
Synechococcus sp. RCC307
Synechococcus sp. RS9916
Synechococcus sp. RS9917
Synechococcus sp. UTEX 2973
Synechococcus sp. WH 5701
Synechococcus sp. WH 7803
Synechococcus sp. WH 7805
Synechococcus sp. WH 8016
Synechococcus sp. WH 8020
Synechococcus sp. WH 8102
Synechococcus sp. WH 8103
Synechococcus sp. WH 8109
Synechocystis sp. PCC 6714
Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803 substr. GT-I
Synechocystis sp. PCC 6803 substr. PCC-N
Synechocystis sp. PCC 6803 substr. PCC-P
Synechocystis sp. PCC 7509
Thermosynechococcus elongatus BP-1
Thermosynechococcus sp. NK55a
Tolypothrix bouteillei VB521301
Tolypothrix campylonemoides VB511288
Tolypothrix sp. PCC 7601
Trichodesmium erythraeum 21-75
Trichodesmium erythraeum IMS101
Trichodesmium thiebautii H9-4
Xenococcus sp. PCC 7305
[Oscillatoria] sp. PCC 6506
[Scytonema hofmanni] UTEX 2349
cyanobacterium PCC 7702
cyanobacterium endosymbiont of Epithemia turgida isolate EtSB Lake Yunoko
filamentous cyanobacterium ESFC-1
A Kazusa API service by Kazusa DNA Research Institute