BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Oscil6304_2374 Transposase IS66 family
(483 letters)
Database: GCA_000505665.1P
2233 sequences; 713,131 total letters
Searching..................................................done
***** No hits found ******
Database: GCA_000505665.1P
Posted date: Aug 27, 2016 10:27 PM
Number of letters in database: 713,131
Number of sequences in database: 2233
Lambda K H
0.317 0.130 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 2233
Number of Hits to DB: 702,484
Number of extensions: 28892
Number of successful extensions: 87
Number of sequences better than 1.0: 0
Number of HSP's gapped: 87
Number of HSP's successfully gapped: 0
Length of query: 483
Length of database: 713,131
Length adjustment: 83
Effective length of query: 400
Effective length of database: 527,792
Effective search space: 211116800
Effective search space used: 211116800
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
