BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= P9215_17181 ATP synthase gamma subunit
(316 letters)
Database: GCA_000332055.1P
5373 sequences; 1,697,783 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Xen7305DRAFT_00044260 ATP synthase, F1 gamma subunit 388 e-135
Xen7305DRAFT_00042360 ATP synthase, F1 gamma subunit 324 e-110
Xen7305DRAFT_00004710 alternate F1F0 ATPase, F1 subunit gamma 67 2e-13
>Xen7305DRAFT_00044260 ATP synthase, F1 gamma subunit
Length = 314
Score = 388 bits (997), Expect = e-135, Method: Compositional matrix adjust.
Identities = 192/314 (61%), Positives = 241/314 (76%), Gaps = 3/314 (0%)
Query: 1 MANLKEIRDRIVSVKNTRKITEAMRLVAAAKVRRAQDQVLKSRPFADKLARVLENIQSRV 60
M NLK IRDRI SVKNT+KITEAMRLVAAAKVRRAQ+QV +RPFAD LA VL ++Q+R+
Sbjct: 1 MPNLKAIRDRIQSVKNTKKITEAMRLVAAAKVRRAQEQVNATRPFADNLAEVLYSLQARL 60
Query: 61 QFEAVDSPLLSKREVKSISLVCITADRGLCGGYNTNIIKKVEIRYAELVKQGFQPNLILV 120
FE +D PL +REVK++ LV ITADRGLCGGYNTN+I++ E R EL +G +L+
Sbjct: 61 SFEDIDLPLFQQREVKTVGLVVITADRGLCGGYNTNVIRRAENRAKELAAEGINYKFVLI 120
Query: 121 GKKAIGFFQNRKDRYVIKSTFKELEQVPTVKDSEGITNEILAEFLSENSDRVEIIYTKFI 180
G+KAI +F+NR I T+ LEQ+P+ ++ I +E+L+ FLSE DRVE+IYTKF+
Sbjct: 121 GRKAIQYFENRNAP--IDKTYAGLEQIPSAAEAASIGDEVLSLFLSETVDRVELIYTKFV 178
Query: 181 TLVSCAPVVQTLLPLDPQGIAEENDEIFRLTTKDSKLLVEKSNIEKSDSEKLPSDIVFEQ 240
+L+S PV+QTLLPL QG+ ++DEIFRLTT+ VE+ + ++ E LP +FEQ
Sbjct: 179 SLISSRPVIQTLLPLTAQGLEVKDDEIFRLTTRGGSFSVERETV-SNEVESLPQYTIFEQ 237
Query: 241 SPDQLLDSLLPLYLQNQVLRALQESAASELACRMTAMNNASDNAKELASTLNLTYNKARQ 300
P Q+LD+LLPLYL NQ+LRALQESAASELA RMTAMNNAS+NA EL TL L+YNKARQ
Sbjct: 238 DPVQILDALLPLYLNNQLLRALQESAASELAARMTAMNNASENASELMKTLTLSYNKARQ 297
Query: 301 AAITQEILEVVGGS 314
AAITQE+LEVV G+
Sbjct: 298 AAITQELLEVVAGA 311
>Xen7305DRAFT_00042360 ATP synthase, F1 gamma subunit
Length = 316
Score = 324 bits (831), Expect = e-110, Method: Compositional matrix adjust.
Identities = 175/318 (55%), Positives = 232/318 (72%), Gaps = 10/318 (3%)
Query: 1 MANLKEIRDRIVSVKNTRKITEAMRLVAAAKVRRAQDQVLKSRPFADKLARVLENIQSRV 60
MANLK IRDRI +VKNT+KITEAMRLVAAAKVRRAQ+QVL RPFAD LA++L ++S +
Sbjct: 1 MANLKAIRDRIKTVKNTKKITEAMRLVAAAKVRRAQEQVLAGRPFADSLAQMLYLLRSYI 60
Query: 61 QFEAVDSPLLSKREVKSISLVCITADRGLCGGYNTNIIKKVEIRYAELVKQGFQPNLILV 120
+FE LL +REVK++ L+ +++DRGLCGGYNT++I++ E R E+ G IL+
Sbjct: 61 RFEEAGLELLLEREVKTVGLIVVSSDRGLCGGYNTSVIRRAEERAQEVKASGLDYQYILI 120
Query: 121 GKKAIGFFQNRKDRYVIKSTFKELEQVPTVKDSEGITNEILAEFLSENSDRVEIIYTKFI 180
G+KAI +FQNR I T+ LEQVPT ++ I + + + +LS DR E+IYTKF+
Sbjct: 121 GRKAIQYFQNRNQ--PIAYTYDGLEQVPTAPEASLIQDGLRSLYLSGKIDRGELIYTKFV 178
Query: 181 TLVSCAPVVQTLLPLDPQGIAEENDEIFRLTTKDSKLLVEKSNIEKSD----SEKLPSDI 236
+L+S PV+QTL PLDP + + E RL T++ KL V+ +E+ + E + + +
Sbjct: 179 SLISSRPVLQTLYPLDPTKLIPDG-ETLRLITQEGKLQVQ---VEREEVQIVEEGIKAQL 234
Query: 237 VFEQSPDQLLDSLLPLYLQNQVLRALQESAASELACRMTAMNNASDNAKELASTLNLTYN 296
+ EQ+P QLLDSLLPLY+ NQ+LRALQESAASELA RM AM+NAS+NA EL +L L+YN
Sbjct: 235 ILEQNPAQLLDSLLPLYILNQLLRALQESAASELAARMNAMSNASENATELIGSLTLSYN 294
Query: 297 KARQAAITQEILEVVGGS 314
KARQAAITQE+LEVV G+
Sbjct: 295 KARQAAITQELLEVVAGA 312
>Xen7305DRAFT_00004710 alternate F1F0 ATPase, F1 subunit gamma
Length = 294
Score = 67.0 bits (162), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 141/330 (42%), Gaps = 60/330 (18%)
Query: 1 MANLKEIRDRIVSVKNTRKITEAMRLVAAAKVRRAQDQVLKSRPFADKLARVLENIQSRV 60
M ++E++ +I + ++ + + + M+ +AA +R+ + A+ L ++ +
Sbjct: 1 MTTIEELKHKIATAQDLQSVVKTMKALAAVSIRQYEKA-------AESLTEYNLTLELGL 53
Query: 61 QFEAVDSP--LLSKREV--KSISLVCITADRGLCGGYNTNIIKKVEIR-YAELVKQGFQP 115
Q + P LL R + + +V +D G+CG +N I + + A + F
Sbjct: 54 QILLKNRPEVLLKTRSIPNRHGGIVVFGSDWGMCGQFNERITSYTQEKIMASPID--FDK 111
Query: 116 NLILVGKKAIGFFQNRKDR-----YVIKSTFKELEQVPTVKDSEGITNEI------LAEF 164
+LIL AIG DR Y ++ F P EGIT I L ++
Sbjct: 112 SLIL----AIG--SRICDRLEAAGYQCQACF------PLPSSIEGITFAIQEIVLILEKW 159
Query: 165 LSENS-DRVEIIYTKFITLVSCAPVVQTLLPLDPQGIAEENDEIFRLTTKDSKLLVEKSN 223
EN +++ +IY + ++ V+ P + PL+ + + RL K
Sbjct: 160 QRENQVEQIIVIYNQILSDVTYRPTNLQIFPLNVEWLK-------RLKNK---------- 202
Query: 224 IEKSDSEKLPSDIVFEQSPDQLLDSLLPLYLQNQVLRALQESAASELACRMTAMNNASDN 283
DS LP+ F +L +L Y + RA ES SE R+ AM A N
Sbjct: 203 --PWDSRSLPT---FTIKGHELAVALFRQYFFVSLYRACAESLKSEHTSRLAAMQMAEKN 257
Query: 284 AKELASTLNLTYNKARQAAITQEILEVVGG 313
E +S LN +N RQ IT+E+L++V G
Sbjct: 258 IAERSSELNREFNHQRQTTITEELLDIVSG 287
Database: GCA_000332055.1P
Posted date: Aug 27, 2016 11:06 PM
Number of letters in database: 1,697,783
Number of sequences in database: 5373
Lambda K H
0.316 0.131 0.347
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5373
Number of Hits to DB: 901,205
Number of extensions: 35410
Number of successful extensions: 128
Number of sequences better than 1.0: 7
Number of HSP's gapped: 124
Number of HSP's successfully gapped: 7
Length of query: 316
Length of database: 1,697,783
Length adjustment: 85
Effective length of query: 231
Effective length of database: 1,241,078
Effective search space: 286689018
Effective search space used: 286689018
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)