cyanobase / GCA_000009705.1 - all2095 orthologs BLAST

BLASTP 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= all2095 two-component sensor histidine kinase (1654 letters) Database: GCA_000952155.1P 4367 sequences; 1,296,044 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UH38_17730 hypothetical protein 296 1e-84 UH38_20860 hypothetical protein 123 3e-29 UH38_05285 histidine kinase 110 6e-25 UH38_14995 hypothetical protein 68 3e-12 UH38_17840 hypothetical protein 64 5e-11 UH38_15980 hypothetical protein 60 1e-09 UH38_21115 hypothetical protein 50 1e-06 UH38_00660 histidine kinase 49 3e-06 UH38_18370 ATPase 48 5e-06 UH38_02980 diguanylate phosphodiesterase 48 5e-06 UH38_00065 histidine kinase 46 2e-05 UH38_06465 chemotaxis protein CheY 46 2e-05 UH38_00395 hypothetical protein 46 2e-05 UH38_16020 phosphoribulokinase 43 3e-05 UH38_20850 histidine kinase 42 4e-04 UH38_06285 hypothetical protein 39 9e-04 UH38_05270 histidine kinase 39 0.004 UH38_08140 cyanobacterial phytochrome A 37 0.009 UH38_17725 hypothetical protein 36 0.019 UH38_15015 hypothetical protein 35 0.035 UH38_21470 diguanylate cyclase 33 0.048 UH38_10930 hypothetical protein 35 0.054 UH38_21350 histidine kinase 34 0.065 UH38_22880 histidine kinase 34 0.069 UH38_09610 hypothetical protein 32 0.41 UH38_11850 chloride channel protein 32 0.51 UH38_17260 histidine kinase 32 0.54 UH38_12355 histidine kinase 31 0.56 UH38_20200 histidine kinase 31 0.81 UH38_11050 histidine kinase 31 0.97 7fc5ed79f1933030377d2370d57b0a91

>UH38_17730 hypothetical protein Length = 883 Score = 296 bits (759), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 239/772 (30%), Positives = 373/772 (48%), Gaps = 97/772 (12%) Query: 925 VDVTDIKHTEETLRQSE----ALLAESQRVA----RLGNWDY-DLATRKITWSQGLFELF 975 +D++D E++LR SE A++ S+ V G W + + A IT F Sbjct: 153 IDISDRFAVEQSLRASEKQYRAVVNNSKEVIFQLDEWGLWTFLNPAWTDITG-------F 205 Query: 976 QRDPALAAPSYEENLQLYHPQDQQK-LHQAVERAVSTGESYKLVLRAFKADGSMIYVEGI 1034 D +L P + HP D K LH ES +R +++E Sbjct: 206 SIDESLGTPFH----TYIHPDDCTKCLHLFQSLMQRQMESCHCEIRYMSKHSKFLWLEVY 261 Query: 1035 GHPQFNPQKQVIRLYGTAQDITSRKQAQEAL-------TKSEEQLRLTLEYTHIGNWDWN 1087 G + +I + G D++ RK A+ AL +S++ LR+ L+ W + Sbjct: 262 GQAILDAYGNIISISGNLNDVSDRKFAEAALQQVHEEVAQSQKMLRMVLDLVPQAIWWKD 321 Query: 1088 LHTNEVIWNYNHYRLLGLDPET---STASYQAWRGVVHPDDINRVEQSVANALEQHSNFE 1144 + + N N R+ G+ + Y W D V+ V N Sbjct: 322 RDSKFLGCNRNFARMAGVQSPSDLIGKTDYDFWTKE-EADSFRAVDARVMN------QNR 374 Query: 1145 AEYRVI-----HSDGSVHWLAGKGHGIYDQTGNPVRMLGVIIDINDRKQTEQALREKEHF 1199 AEY +I H+ + WL +D G + LG +I+DRK ++ ++ + Sbjct: 375 AEYGIIEPACLHNSTTTVWLETNKMPFHDARGQVIGTLGTTQNISDRKLAQEVMQRQLAA 434 Query: 1200 LSSIYDGVANSIFVVDVVNGDFRFMGLNPAHEQLTGFIS-HELQGKTPEQVLPPI----- 1253 + + DG+ +VN + ++ +N A+ + G+ S EL GKT ++ P Sbjct: 435 MEATIDGIG-------IVNQNGEYIYVNQAYIDIYGYDSPTELLGKTWRELYYPDEIARF 487 Query: 1254 ---LAATVRQHYQDCIEAGETITYEEYLYLKNQD-TWWITNLTPLRDENLNIYRIIGSGI 1309 + A VRQ+ + GE + K +D + + L+ EN N+ I Sbjct: 488 ENDVTAIVRQNGR---WRGEAVA-------KRKDGSIFFEELSLSLLENGNLISICR--- 534 Query: 1310 NITEQKRAQQMLE-----LQAVVTRNMAEGLCLVRASDGVIVYTNPKFEQIFGYEVSELL 1364 NI ++K + L QA + + + ++ VY N FE+ F ++ +L Sbjct: 535 NICDRKYMEAALRQSEARFQAFMKNSPV--VAFIKDEQSRNVYVNETFERAFNIKMVDLR 592 Query: 1365 GQHISIINYEDEHTKPIEI------HEAIAAAATLHGETTYEVQNIKK-DGTPFWCRATA 1417 G+ D+ P E+ H+ I + G T ++ I +G+ + Sbjct: 593 GKR-------DDEWLPKEVVKQVHEHDQIVFST---GNTLKTIETIPTPNGSSLYWLVLK 642 Query: 1418 SVFEHPEYGTVFVAVQQDITEQKQAEEKIKASLKEKEVLLQEIHHRVKNNLGIVSSLLQM 1477 + + P+ + V DITE K AEEKIKA+L+EKEVLL+E+HHRVKNNL ++ SL + Sbjct: 643 FLIDDPQGQPLLGGVAIDITEHKLAEEKIKAALQEKEVLLKEVHHRVKNNLQVIDSLFRH 702 Query: 1478 QCRRTQDPQANAILRDSQNRIASIALAHEKLYRSNDLANIDFAQYIPDLTTHLFDSYNVK 1537 QCR ++ QA +L++ QNR+ S+AL HEKLY+S L+NI+FA Y+ L +LF SYN+ Sbjct: 703 QCRHIKNQQAIDVLKECQNRVVSMALLHEKLYQSKSLSNIEFADYVKSLVANLFSSYNIY 762 Query: 1538 SSCIQLSIQVEETSLDLETAIPCGLIINELVSNALKYAFPNNREGEIQVRLFQQSDRTLT 1597 + L+I++E+ L+ E A+ CGLIINEL++NALKYAFP+ GEI + + S + Sbjct: 763 AGENHLNIKIEKVFLEFELALNCGLIINELLTNALKYAFPSGILGEIHIEFWYSSPESYN 822 Query: 1598 LIVRDNGIGLPVEFDGKKTKTLGITLVQGLVQQLRGKLEIQSQSGTEFKISF 1649 LI+RDNG+GLP D +K KTLG+ LV+ LV+QL GK+EI S GT FKISF Sbjct: 823 LIIRDNGVGLPANIDLEKVKTLGLKLVRSLVRQLDGKVEITSDRGTNFKISF 874 Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 124/558 (22%), Positives = 228/558 (40%), Gaps = 47/558 (8%) Query: 784 GEEIHLVRV-TDISQRKLAEIALHEREMMLRSIGDNLPNGAVYQIVRELDGSDRFSYFSA 842 G H++ DIS R E +L E R++ +N +++ +LD +++ + Sbjct: 143 GSVTHVISTGIDISDRFAVEQSLRASEKQYRAVVNNSK-----EVIFQLDEWGLWTFLNP 197 Query: 843 GIERLMEVRAEDVLADATLLYRQ-----LCAEDIPSFVQAVEESYCHLSVFDIQLRVCTP 897 + ++ L Y C S +Q ES CH ++R + Sbjct: 198 AWTDITGFSIDESLGTPFHTYIHPDDCTKCLHLFQSLMQRQMES-CH-----CEIRYMSK 251 Query: 898 SGMWKWVQLRSTPRQLPDGRV-AWDGLIVDVTDIKHTEETLRQSEALLAESQRVARLGNW 956 + W+++ G + + G + DV+D K E L+Q +A+SQ++ R+ Sbjct: 252 HSKFLWLEVYGQAILDAYGNIISISGNLNDVSDRKFAEAALQQVHEEVAQSQKMLRMV-- 309 Query: 957 DYDLATRKITWSQ------GLFELFQRDPALAAPS---YEENLQLYHPQDQQKLHQAVER 1007 DL + I W G F R + +PS + + + ++ R Sbjct: 310 -LDLVPQAIWWKDRDSKFLGCNRNFARMAGVQSPSDLIGKTDYDFWTKEEADSFRAVDAR 368 Query: 1008 AVSTGES-YKLVLRA-FKADGSMIYVEGIGHPQFNPQKQVIRLYGTAQDITSRKQAQEAL 1065 ++ + Y ++ A + +++E P + + QVI GT Q+I+ RK AQE + Sbjct: 369 VMNQNRAEYGIIEPACLHNSTTTVWLETNKMPFHDARGQVIGTLGTTQNISDRKLAQEVM 428 Query: 1066 TKSEEQLRLTLEYTHIGNWDWNLHTNEVIW-NYNHYRLLGLDPETSTASYQAWRGVVHPD 1124 + + T++ I N E I+ N + + G D T + WR + +PD Sbjct: 429 QRQLAAMEATIDGIGIVN-----QNGEYIYVNQAYIDIYGYDSPTELLG-KTWRELYYPD 482 Query: 1125 DINRVEQSVANALEQHSNFEAEYRVIHSDGSVHWLAGKGHGIYDQTGNPVRMLGVIIDIN 1184 +I R E V + Q+ + E DGS+ + + + GN ++ + +I Sbjct: 483 EIARFENDVTAIVRQNGRWRGEAVAKRKDGSIFFEELSLSLL--ENGN---LISICRNIC 537 Query: 1185 DRKQTEQALREKEHFLSSIYDGVANSIFVVDVVNGDFRFMGLNPAHEQLTGFISHELQGK 1244 DRK E ALR+ E + + NS V + + R + +N E+ +L+GK Sbjct: 538 DRKYMEAALRQSEARFQAF---MKNSPVVAFIKDEQSRNVYVNETFERAFNIKMVDLRGK 594 Query: 1245 TPEQVLPPILAATVRQHYQDCIEAGETITYEEYLYLKNQDTWWITNLTPLRDENLNIYRI 1304 ++ LP + V +H Q G T+ E + N + + L L D+ + Sbjct: 595 RDDEWLPKEVVKQVHEHDQIVFSTGNTLKTIETIPTPNGSSLYWLVLKFLIDDPQGQPLL 654 Query: 1305 IGSGINITEQKRAQQMLE 1322 G I+ITE K A++ ++ Sbjct: 655 GGVAIDITEHKLAEEKIK 672 Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 135/619 (21%), Positives = 252/619 (40%), Gaps = 95/619 (15%) Query: 245 GSLRWIAATHSSRYDPKADCWVVTATNIDISERKQAEAALRKSEERWQLAIVGTDEAIWD 304 G R I+ T++ D V +T IDIS+R E +LR SE++++ + + E I+ Sbjct: 126 GDRRSISWTNTVLEDRDGSVTHVISTGIDISDRFAVEQSLRASEKQYRAVVNNSKEVIFQ 185 Query: 305 WDILTNHTYRSDRWFEMLGYERHEMSTFDDEWSIRIHPDDYNRVMAAQAAYLRREVPVYY 364 D T+ + W ++ G+ E + + IHPDD + + + ++R++ + Sbjct: 186 LDEWGLWTFLNPAWTDITGFSIDE--SLGTPFHTYIHPDDCTKCLHLFQSLMQRQMESCH 243 Query: 365 TEYRLRCKDGNYKWFRSRAKGVWDEQGNPIRLVGSLGDITGRKSIELDL-------IRSE 417 E R K + W + + D GN I + G+L D++ RK E L +S+ Sbjct: 244 CEIRYMSKHSKFLWLEVYGQAILDAYGNIISISGNLNDVSDRKFAEAALQQVHEEVAQSQ 303 Query: 418 TQYRLLFENNPNPMWIFDPETLSFLAVNQAAIYKYGY-SQAEFLSMTVLDICPREKIPA- 475 R++ + P +W D ++ FL N+ G S ++ + T D +E+ + Sbjct: 304 KMLRMVLDLVPQAIWWKDRDS-KFLGCNRNFARMAGVQSPSDLIGKTDYDFWTKEEADSF 362 Query: 476 -------LLRSMSDFGVFSSAIYVGEAKHCTRDG-TLIDVEVNSHP--------IAWLGK 519 + ++ +++G+ A C + T + +E N P I LG Sbjct: 363 RAVDARVMNQNRAEYGIIEPA--------CLHNSTTTVWLETNKMPFHDARGQVIGTLGT 414 Query: 520 PAKFALAKDITAQKAALRELQEIEIELRESKRFIEQVISHSPQLLYIFEPTTGSNIYLNG 579 + K AQ+ R+L +E + + + Q G IY+N Sbjct: 415 TQNISDRK--LAQEVMQRQLAAMEATI-DGIGIVNQ---------------NGEYIYVNQ 456 Query: 580 QSVDILGY-TPEEIKARGVKFFLDVLHPDDLYLLERNLN--YWQNAADGEVLTTEWR--- 633 +DI GY +P E+ K + ++ +PD++ E ++ QN WR Sbjct: 457 AYIDIYGYDSPTELLG---KTWRELYYPDEIARFENDVTAIVRQNG--------RWRGEA 505 Query: 634 -MKHKNGSWRWLRSRDVVFARDENHFPCKVLGTTQDITDSKLAELEIIHSRDLLEAIYNG 692 K K+GS + ++ + EN ++ ++I D K E + S +A Sbjct: 506 VAKRKDGS---IFFEELSLSLLENG---NLISICRNICDRKYMEAALRQSEARFQAFMKN 559 Query: 693 STDALFLVNPQTLLIIDCNQQAVQVFAASGKEELIGSDGQTLQKQRFTPDEVTSVIEELN 752 S F+ + Q+ N + F + +++ G+ + + P EV + E + Sbjct: 560 SPVVAFIKDEQSR-----NVYVNETFERAFNIKMVDLRGK--RDDEWLPKEVVKQVHEHD 612 Query: 753 HQGFWS----REVEYI-TKQG-KFFWGNLAVKQIYVAGEEIHLVRVTDISQRKLAE---- 802 F + + +E I T G +W L G+ + DI++ KLAE Sbjct: 613 QIVFSTGNTLKTIETIPTPNGSSLYWLVLKFLIDDPQGQPLLGGVAIDITEHKLAEEKIK 672 Query: 803 IALHEREMMLRSIGDNLPN 821 AL E+E++L+ + + N Sbjct: 673 AALQEKEVLLKEVHHRVKN 691 Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust. Identities = 71/311 (22%), Positives = 122/311 (39%), Gaps = 26/311 (8%) Query: 1168 DQTGNPVRMLGVIIDINDRKQTEQALREKEHFLSSIYDGVANSIFVVDVVNGDFRFMGLN 1227 D+ G+ ++ IDI+DR EQ+LR E ++ + IF +D G + F LN Sbjct: 140 DRDGSVTHVISTGIDISDRFAVEQSLRASEKQYRAVVNNSKEVIFQLDEW-GLWTF--LN 196 Query: 1228 PAHEQLTGFISHELQGKTPEQVLPPILAATVRQHYQDCIEAGETITYEEYLYLKNQDT-- 1285 PA +TGF E G + P +Q ++ + E Y+ Sbjct: 197 PAWTDITGFSIDESLGTPFHTYIHPDDCTKCLHLFQSLMQRQMESCHCEIRYMSKHSKFL 256 Query: 1286 WWITNLTPLRDENLNIYRIIGSGINITEQKRA----QQMLELQAVVTRNMAEGLCLV--- 1338 W + D NI I G+ +++++K A QQ+ E A + + L LV Sbjct: 257 WLEVYGQAILDAYGNIISISGNLNDVSDRKFAEAALQQVHEEVAQSQKMLRMVLDLVPQA 316 Query: 1339 ---RASDGVIVYTNPKFEQIFGYEV-SELLGQHISIINYEDEHTKPIEIHEAIAAAATLH 1394 + D + N F ++ G + S+L+G+ +Y+ + + A+ A Sbjct: 317 IWWKDRDSKFLGCNRNFARMAGVQSPSDLIGK----TDYDFWTKEEADSFRAVDARVMNQ 372 Query: 1395 GETTY---EVQNIKKDGTPFWCRATASVFEHPEYGTVF--VAVQQDITEQKQAEEKIKAS 1449 Y E + T W F H G V + Q+I+++K A+E ++ Sbjct: 373 NRAEYGIIEPACLHNSTTTVWLETNKMPF-HDARGQVIGTLGTTQNISDRKLAQEVMQRQ 431 Query: 1450 LKEKEVLLQEI 1460 L E + I Sbjct: 432 LAAMEATIDGI 442 >UH38_20860 hypothetical protein Length = 829 Score = 123 bits (309), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 57/174 (32%), Positives = 103/174 (59%) Query: 1042 QKQVIRLYGTAQDITSRKQAQEALTKSEEQLRLTLEYTHIGNWDWNLHTNEVIWNYNHYR 1101 +++V +L T++ +T + ++ E+QLRL LE H+G WDWN+ TNEV++ + Sbjct: 120 RQRVRQLLQTSKALTELQAQKQQAELQEKQLRLALEAAHMGTWDWNIVTNEVVYCHQLEL 179 Query: 1102 LLGLDPETSTASYQAWRGVVHPDDINRVEQSVANALEQHSNFEAEYRVIHSDGSVHWLAG 1161 + G TS +Y+A+ V+P D +RV +++ A+E+ + E+R++ S+G + WL Sbjct: 180 IFGFSAGTSHRNYEAFLDCVYPSDRDRVNRAINEAIERGKEYGLEFRIVDSEGRLKWLGS 239 Query: 1162 KGHGIYDQTGNPVRMLGVIIDINDRKQTEQALREKEHFLSSIYDGVANSIFVVD 1215 KG +D G P+RM+G+ +DI R+ ++ L+ +E L S+ + +VVD Sbjct: 240 KGQVYHDSKGKPLRMVGIAMDITARQLAQEQLQSQETLLRSMTSASPLAFYVVD 293 Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 79/376 (21%), Positives = 165/376 (43%), Gaps = 31/376 (8%) Query: 903 WVQLRSTPRQLPDGRVAWDGLIVDVTDIKHTEETLRQSEALLAESQRVARLGNWDYDLAT 962 W LR RQL A +T+++ ++ E L + A +G WD+++ T Sbjct: 116 WAVLRQRVRQLLQTSKA-------LTELQAQKQQAELQEKQLRLALEAAHMGTWDWNIVT 168 Query: 963 RKITWSQGLFELFQRDPALAAPSYEENLQLYHPQDQQKLHQAVERAVSTGESYKLVLRAF 1022 ++ + L +F + +YE L +P D+ ++++A+ A+ G+ Y L R Sbjct: 169 NEVVYCHQLELIFGFSAGTSHRNYEAFLDCVYPSDRDRVNRAINEAIERGKEYGLEFRIV 228 Query: 1023 KADGSMIYVEGIGHPQFNPQKQVIRLYGTAQDITSRKQAQEALTKSEEQLRLTLEYTHIG 1082 ++G + ++ G + + + +R+ G A DIT+R+ AQE L E LR + + Sbjct: 229 DSEGRLKWLGSKGQVYHDSKGKPLRMVGIAMDITARQLAQEQLQSQETLLRSMTSASPLA 288 Query: 1083 NWDWNLHTNEVIW-NYNHYRLLGLDPETSTASYQAWRGVVHPDDINRVEQSVANALEQHS 1141 + + ++E+++ N+ + G++ + + RG + +DI + + + L Sbjct: 289 FYVVDNRSDEILYFNHRFCEIWGIEHLEAALT----RGELKNNDI--IPECI-KVLADVP 341 Query: 1142 NFEAEYRVIHSDGSVHWLAGKGHGIYDQT----GNPVR--------MLGVIIDINDRKQT 1189 F + + ++ S + + IYD+T +R L + DI +RKQ Sbjct: 342 AFVESCKPLQNEASNSIVEDEIAFIYDRTIRRFSTQIRDRQNRYFGRLYLFEDITERKQA 401 Query: 1190 EQALRE---KEHFLSSIYDGVANSIFVVDVVNGDF-RFMGLNPAHEQLTGFISHELQGKT 1245 E A+++ + S I + S+ + +V+ + L A L +S + GK Sbjct: 402 ELAIKQAQRRSQLFSEITLKIRQSLHLDEVLKTAVTELLNLLKADRALIFRLSPDGNGKI 461 Query: 1246 PEQVLPPILAATVRQH 1261 + + ++ V+Q+ Sbjct: 462 VTEAVVSTYSSVVKQN 477 Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 6/212 (2%) Query: 275 SERKQAEAALRKSEERWQLAIVGTDEAIWDWDILTNHTYRSDRWFEMLGYERHEMSTFDD 334 ++++QAE E++ +LA+ WDW+I+TN + + G+ + Sbjct: 138 AQKQQAEL----QEKQLRLALEAAHMGTWDWNIVTNEVVYCHQLELIFGFSAGTSHRNYE 193 Query: 335 EWSIRIHPDDYNRVMAAQAAYLRREVPVYYTEYRLRCKDGNYKWFRSRAKGVWDEQGNPI 394 + ++P D +RV A + R Y E+R+ +G KW S+ + D +G P+ Sbjct: 194 AFLDCVYPSDRDRVNRAINEAIERGKE-YGLEFRIVDSEGRLKWLGSKGQVYHDSKGKPL 252 Query: 395 RLVGSLGDITGRKSIELDLIRSETQYRLLFENNPNPMWIFDPETLSFLAVNQAAIYKYGY 454 R+VG DIT R+ + L ET R + +P ++ D + L N +G Sbjct: 253 RMVGIAMDITARQLAQEQLQSQETLLRSMTSASPLAFYVVDNRSDEILYFNHRFCEIWGI 312 Query: 455 SQAEFLSMTVLDICPREKIPALLRSMSDFGVF 486 E ++T ++ + IP ++ ++D F Sbjct: 313 EHLE-AALTRGELKNNDIIPECIKVLADVPAF 343 Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 49/208 (23%), Positives = 86/208 (41%), Gaps = 11/208 (5%) Query: 128 AQLEQEVVRREQMSELLLQSDAQYQTSEARFNDILNSAISTCIVCFRVFTNFDWEYVYHS 187 A L Q V + Q S+ L + AQ Q +E + L A+ + +DW V + Sbjct: 117 AVLRQRVRQLLQTSKALTELQAQKQQAELQEKQ-LRLALEAAHM-----GTWDWNIVTNE 170 Query: 188 V----GCETVFGYPSQEFFSNKHLWLSQVHPDDVETVIMPGFADIFAAKTFDFEYRFKHK 243 V E +FG+ + N +L V+P D + V I K + E+R Sbjct: 171 VVYCHQLELIFGFSAGTSHRNYEAFLDCVYPSDRDRVNRAINEAIERGKEYGLEFRIVDS 230 Query: 244 DGSLRWIAATHSSRYDPKADCWVVTATNIDISERKQAEAALRKSEERWQLAIVGTDEAIW 303 +G L+W+ + +D K + +DI+ R+ A+ L+ E + + A + Sbjct: 231 EGRLKWLGSKGQVYHDSKGKPLRMVGIAMDITARQLAQEQLQSQETLLRSMTSASPLAFY 290 Query: 304 DWDILTNHT-YRSDRWFEMLGYERHEMS 330 D ++ Y + R+ E+ G E E + Sbjct: 291 VVDNRSDEILYFNHRFCEIWGIEHLEAA 318 Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 28/184 (15%) Query: 1303 RIIGSGINITEQKRAQQMLELQAVVTRNMAEG----LCLVRASDGVIVYTNPKFEQIFGY 1358 R++G ++IT ++ AQ+ L+ Q + R+M +V I+Y N +F +I+G Sbjct: 253 RMVGIAMDITARQLAQEQLQSQETLLRSMTSASPLAFYVVDNRSDEILYFNHRFCEIWGI 312 Query: 1359 EVSELLGQHISIINYEDEHTKPIEIHEAIAAAATLHG--ETTYEVQN-----IKKDGTPF 1411 E H+ E I E I A + E+ +QN I +D F Sbjct: 313 E-------HLEAALTRGELKNNDIIPECIKVLADVPAFVESCKPLQNEASNSIVEDEIAF 365 Query: 1412 WCRATASVF-------EHPEYGTVFVAVQQDITEQKQAEEKIKASLKEKEVLLQEIHHRV 1464 T F ++ +G +++ +DITE+KQAE IK + + + L EI ++ Sbjct: 366 IYDRTIRRFSTQIRDRQNRYFGRLYLF--EDITERKQAELAIKQAQRRSQ-LFSEITLKI 422 Query: 1465 KNNL 1468 + +L Sbjct: 423 RQSL 426 Score = 32.0 bits (71), Expect = 0.42, Method: Compositional matrix adjust. Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 28/155 (18%) Query: 742 DEVTSVIEELNHQGF-WSREVEYITKQGKFFWGNLAVK-QIY--VAGEEIHLVRVT-DIS 796 D V I E +G + E + +G+ W L K Q+Y G+ + +V + DI+ Sbjct: 205 DRVNRAINEAIERGKEYGLEFRIVDSEGRLKW--LGSKGQVYHDSKGKPLRMVGIAMDIT 262 Query: 797 QRKLAEIALHEREMMLRSIGDNLPNGAVYQIVRELDGSDRFSYFSA------GIERLM-- 848 R+LA+ L +E +LRS+ P + +V + SD YF+ GIE L Sbjct: 263 ARQLAQEQLQSQETLLRSMTSASP--LAFYVVD--NRSDEILYFNHRFCEIWGIEHLEAA 318 Query: 849 ----EVRAEDVLADATLLYRQLCAEDIPSFVQAVE 879 E++ D++ + + D+P+FV++ + Sbjct: 319 LTRGELKNNDIIPECIKVL-----ADVPAFVESCK 348 Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 8/70 (11%) Query: 518 GKPAKF-ALAKDITAQKAALRELQEIEIELRESKRFIEQVISHSPQLLYIFEPTTGSNIY 576 GKP + +A DITA++ A +LQ E LR + S SP Y+ + + +Y Sbjct: 249 GKPLRMVGIAMDITARQLAQEQLQSQETLLRS-------MTSASPLAFYVVDNRSDEILY 301 Query: 577 LNGQSVDILG 586 N + +I G Sbjct: 302 FNHRFCEIWG 311 >UH38_05285 histidine kinase Length = 1160 Score = 110 bits (274), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 70/236 (29%), Positives = 122/236 (51%), Gaps = 8/236 (3%) Query: 1043 KQVIRLYGTAQDITSRKQAQEALTKSEEQLRLTLEYTHIGNWDWNLHTNEVIWNYNHYRL 1102 +Q +RLY Q + A E L +SEE+ RL LE + G WDW T+EV N + Sbjct: 120 RQAVRLYRAEQ---AAILANERLRQSEERYRLVLEGANDGIWDWYCSTDEVYSNDRLLEI 176 Query: 1103 LGLDPETSTASYQAWRGVVHPDDINRVEQSVANALEQHSNFEAEYRVIHSDGSVHWLAGK 1162 +G E + ++HPDD+ ++ ++ N L+ EAE+R+ H+DG + + Sbjct: 177 IGATRENFQLTASNLMALMHPDDLPKIRLAIKNHLQYGEKCEAEFRIRHTDGEYRYCVAR 236 Query: 1163 GHGIYDQTGNPVRMLGVIIDINDRKQTEQALREKEHFLSSIYDGVANSIFVVDVVNGDFR 1222 G D+ PVRM G+I DI+++KQ E+ALR + + + AN I ++ V + + + Sbjct: 237 GKAQRDRYNCPVRMSGIISDISEQKQLEEALRASQSRFRRLAE--ANIIGII-VADAEGK 293 Query: 1223 FMGLNPAHEQLTGFISHELQ-GKTP-EQVLPPILAATVRQHYQDCIEAGETITYEE 1276 + N A +TG+ ++ G+ +++ PP A + R+ ++ + G YE+ Sbjct: 294 LIEANDAFLAMTGYSREDIHLGRLHWQEITPPEYAQSDRRAAEELLSKGVFGAYEK 349 Score = 98.2 bits (243), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 78/288 (27%), Positives = 135/288 (46%), Gaps = 17/288 (5%) Query: 284 LRKSEERWQLAIVGTDEAIWDWDILTNHTYRSDRWFEMLGYERHEMSTFDDEWSIRIHPD 343 LR+SEER++L + G ++ IWDW T+ Y +DR E++G R +HPD Sbjct: 139 LRQSEERYRLVLEGANDGIWDWYCSTDEVYSNDRLLEIIGATRENFQLTASNLMALMHPD 198 Query: 344 DYNRVMAAQAAYLRREVPVYYTEYRLRCKDGNYKWFRSRAKGVWDEQGNPIRLVGSLGDI 403 D ++ A +L+ E+R+R DG Y++ +R K D P+R+ G + DI Sbjct: 199 DLPKIRLAIKNHLQYGEKC-EAEFRIRHTDGEYRYCVARGKAQRDRYNCPVRMSGIISDI 257 Query: 404 TGRKSIELDLIRSETQYRLLFENNPNPMWIFDPETLSFLAVNQAAIYKYGYSQAEFLSMT 463 + +K +E L S++++R L E N + + D E + N A + GYS+ E + + Sbjct: 258 SEQKQLEEALRASQSRFRRLAEANIIGIIVADAEG-KLIEANDAFLAMTGYSR-EDIHLG 315 Query: 464 VL---DICPREKIPALLRSMSDFGVFSSAIYVGEAKHC-TRDGTLIDVEVNSHPIAWLGK 519 L +I P E + R+ + S ++ K C DG+ I + + A + Sbjct: 316 RLHWQEITPPEYAQSDRRAAEEL--LSKGVFGAYEKECICSDGSRIPLLLGG---ALVEG 370 Query: 520 PAKFALAKDITAQKAALRELQEIEIELRESKRFIEQVISHSPQLLYIF 567 FA+ I LR+ + + ++ E R +E+ +S LL + Sbjct: 371 TETFAICFAID-----LRDRKRTDAQIGELNRDLERRVSEMQTLLDVI 413 Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 104/437 (23%), Positives = 166/437 (37%), Gaps = 32/437 (7%) Query: 935 ETLRQSEALLAESQRVARLGNWDYDLATRKITWSQGLFELFQRDPALAAPSYEENLQLYH 994 E LRQSE A G WD+ +T ++ + L E+ + + L H Sbjct: 137 ERLRQSEERYRLVLEGANDGIWDWYCSTDEVYSNDRLLEIIGATRENFQLTASNLMALMH 196 Query: 995 PQDQQKLHQAVERAVSTGESYKLVLRAFKADGSMIYVEGIGHPQFNPQKQVIRLYGTAQD 1054 P D K+ A++ + GE + R DG Y G Q + +R+ G D Sbjct: 197 PDDLPKIRLAIKNHLQYGEKCEAEFRIRHTDGEYRYCVARGKAQRDRYNCPVRMSGIISD 256 Query: 1055 ITSRKQAQEALTKSEEQLRLTLEYTHIGNWDWNLHTNEVIWNYNHYRLLGLDPETSTASY 1114 I+ +KQ +EAL S+ + R E IG + + N + G E Sbjct: 257 ISEQKQLEEALRASQSRFRRLAEANIIGIIVADAEGKLIEANDAFLAMTGYSREDIHLGR 316 Query: 1115 QAWRGVVHPDDINRVEQSVANALEQHSNFEA-EYRVIHSDGSVHWLAGKGHGIYDQTGNP 1173 W+ + P + + ++ A L F A E I SDGS L G + G Sbjct: 317 LHWQEITPP-EYAQSDRRAAEELLSKGVFGAYEKECICSDGSRIPLLLGGALV---EGTE 372 Query: 1174 VRMLGVIIDINDRKQTEQAL----REKEHFLS---SIYDGVANSIFVVDVVNGDFRFMGL 1226 + ID+ DRK+T+ + R+ E +S ++ D + I + + + + + Sbjct: 373 TFAICFAIDLRDRKRTDAQIGELNRDLERRVSEMQTLLDVIPIGIAIAQ--DPQCQHIQV 430 Query: 1227 NPAHEQLTGFISHELQGKT-PEQVLPPI--------LAATVRQHYQDCIEAGETITYE-E 1276 NP+ +L G + K+ P P L A Q + E + E + Sbjct: 431 NPSLAKLLGLSGNANASKSAPVGDRPDYEVYKEGRELDAVELPMQQAAAQGIEVLNSEID 490 Query: 1277 YLYLKNQDTWWITNLTPLRDENLNIYRIIGSGINITEQKRAQQMLELQAVVTRNMAEGLC 1336 L Q + N PL DE +G +ITE+KR ++ R +AE Sbjct: 491 LLVDTTQKLKLLANAAPLFDEQGKSRGSVGVFWDITERKRIEEQ-------ERFLAEASA 543 Query: 1337 LVRAS-DGVIVYTNPKF 1352 ++ AS D TN F Sbjct: 544 ILAASLDYRTTLTNLAF 560 Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 50/202 (24%), Positives = 84/202 (41%), Gaps = 7/202 (3%) Query: 179 FDW----EYVYHSVGCETVFGYPSQEFFSNKHLWLSQVHPDDVETVIMPGFADIFAAKTF 234 +DW + VY + + G + F ++ +HPDD+ + + + + Sbjct: 158 WDWYCSTDEVYSNDRLLEIIGATRENFQLTASNLMALMHPDDLPKIRLAIKNHLQYGEKC 217 Query: 235 DFEYRFKHKDGSLRWIAATHSSRYDPKADCWVVTATNI-DISERKQAEAALRKSEERWQL 293 + E+R +H DG R+ A ++ D + +C V + I DISE+KQ E ALR S+ R++ Sbjct: 218 EAEFRIRHTDGEYRYCVARGKAQRD-RYNCPVRMSGIISDISEQKQLEEALRASQSRFRR 276 Query: 294 AIVGTDEAIWDWDILTNHTYRSDRWFEMLGYERHEMSTFDDEWSIRIHPDDYNRVMAAQA 353 I D +D + M GY R ++ W I P +Y + A Sbjct: 277 LAEANIIGIIVADAEGKLIEANDAFLAMTGYSREDIHLGRLHWQ-EITPPEYAQSDRRAA 335 Query: 354 AYLRREVPVYYTEYRLRCKDGN 375 L + E C DG+ Sbjct: 336 EELLSKGVFGAYEKECICSDGS 357 Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 22/203 (10%) Query: 575 IYLNGQSVDILGYTPEEIKARGVKFFLDVLHPDDL----YLLERNLNYWQNAADGEVLTT 630 +Y N + ++I+G T E + + ++HPDDL ++ +L Y GE Sbjct: 167 VYSNDRLLEIIGATRENFQLTASNL-MALMHPDDLPKIRLAIKNHLQY------GEKCEA 219 Query: 631 EWRMKHKNGSWRWLRSRDVVFARDENHFPCKVLGTTQDITDSKLAELEIIHSRDLLEAIY 690 E+R++H +G +R+ +R RD + P ++ G DI++ K E + S+ + Sbjct: 220 EFRIRHTDGEYRYCVARGKA-QRDRYNCPVRMSGIISDISEQKQLEEALRASQSRFRRLA 278 Query: 691 NGSTDALFLVNPQTLLIIDCNQQAVQVFAASGKEELIGSDGQTLQKQRFTPDEVTS---- 746 + + + + + L I+ N + + S ++ +G L Q TP E Sbjct: 279 EANIIGIIVADAEGKL-IEANDAFLAMTGYSREDIHLGR----LHWQEITPPEYAQSDRR 333 Query: 747 VIEELNHQG-FWSREVEYITKQG 768 EEL +G F + E E I G Sbjct: 334 AAEELLSKGVFGAYEKECICSDG 356 Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust. Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 23/105 (21%) Query: 1563 IINELVSNALKYAFPNNREGEIQVRLFQQSDRTLTLIVRDNGIGLP-----------VEF 1611 I+ L+SNA+K+ G + V + Q DR + + V+D G+G+ + Sbjct: 1052 ILVNLLSNAIKF----TDTGTVDVTIGQTPDRVI-ISVKDTGVGIAESELEHIFEEFRQV 1106 Query: 1612 DGKKTKT-----LGITLVQGLVQQLRGKLEIQSQ--SGTEFKISF 1649 D T+ LG+ + + LV ++G + ++SQ G+ F +S Sbjct: 1107 DQTTTRQHGGTGLGLAITRSLVNMMQGAIAVESQLEQGSTFTVSL 1151 >UH38_14995 hypothetical protein Length = 505 Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 20/172 (11%) Query: 134 VVRREQMSELLLQSDAQYQT-------SEARFNDILNSAISTCIVCFRVFTNFDWEYVYH 186 ++R + S+ LL ++ Q Q SEA+F ++N++ V D VY Sbjct: 110 LLRSRKYSQQLLAANHQLQVVAANLSASEAKFRSLVNNSSDAIAVVKE-----DGVVVYA 164 Query: 187 SVGCETVFGYPSQEFFSNKHLWLSQVHPDDVETVIMPGFADIFAA-KTFDFEYRFKHKDG 245 S T+FG+ QE K+++ +HPDD+ + I P A + KT EYRF+HKDG Sbjct: 165 SPSSRTIFGFSPQEL-EGKNVF-DFIHPDDLSSAIAPFRASLINPDKTQVSEYRFRHKDG 222 Query: 246 SLRWIAATHSSRYDPKADCWVVTATNIDISERKQAEA----ALRKSEERWQL 293 S R++ + + + +V T+ DI++RKQAEA AL+ ++E +L Sbjct: 223 SWRYLESKSNFSHTALQSRGIVV-TSRDITQRKQAEADIINALQTAQELSEL 273 Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 77/152 (50%), Gaps = 13/152 (8%) Query: 534 AALRELQEIEIELRESKRFIEQVISHSPQLLYIFEPTTGSNIYLNGQSVDILGYTPEEIK 593 AA +LQ + L S+ ++++S + + + G +Y + S I G++P+E++ Sbjct: 122 AANHQLQVVAANLSASEAKFRSLVNNSSDAIAVVKED-GVVVYASPSSRTIFGFSPQELE 180 Query: 594 ARGVKFFLDVLHPDDLYLLERNLNYWQNAADGEVLTTEWRMKHKNGSWRWLRSRDVVFAR 653 + V D +HPDDL D + +E+R +HK+GSWR+L S+ Sbjct: 181 GKNV---FDFIHPDDLSSAIAPFRASLINPD-KTQVSEYRFRHKDGSWRYLESKS----- 231 Query: 654 DENHFPCKVLG---TTQDITDSKLAELEIIHS 682 + +H + G T++DIT K AE +II++ Sbjct: 232 NFSHTALQSRGIVVTSRDITQRKQAEADIINA 263 Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 71/307 (23%), Positives = 138/307 (44%), Gaps = 36/307 (11%) Query: 1327 VTRNMAEGLCLVRASDGVIVYTNPKFEQIFGYEVSELLGQHISIINYEDEHTKPIEIHEA 1386 + N ++ + +V+ DGV+VY +P IFG+ EL G+++ + P ++ A Sbjct: 144 LVNNSSDAIAVVK-EDGVVVYASPSSRTIFGFSPQELEGKNVF------DFIHPDDLSSA 196 Query: 1387 IAA-AATLHGETTYEVQNIK---KDGTPFWCRATASVFEHPEYGTVFVAVQQDITEQKQA 1442 IA A+L +V + KDG+ + + ++ V +DIT++KQA Sbjct: 197 IAPFRASLINPDKTQVSEYRFRHKDGSWRYLESKSNFSHTALQSRGIVVTSRDITQRKQA 256 Query: 1443 EEKIKASLKEKEVL-------LQEIHHRVKNNLGIVSSLLQMQCRRTQ----DPQANAIL 1491 E I +L+ + L + + H ++N L +S+ Q+ R + D + + Sbjct: 257 EADIINALQTAQELSELKTRFVSMVSHEIRNPLNSISTAAQLLERYGEKWDRDKKQDFFQ 316 Query: 1492 RDSQN-RIASIALAHEKLYRSNDLANIDFAQYIPDLTTHLFD-----SYNVKSSCIQLSI 1545 R N ++ + L L + ++ + ++ + D NV S QL Sbjct: 317 RIKVNVKLLTELLEDVLLIGKVEAGKLEIQPTLVEIESFCNDLLEEVKLNVDGSH-QLIF 375 Query: 1546 QVEE--TSLDLETAIPCGLIINELVSNALKYAFPNNREGEIQVRLFQQSDRTLTLIVRDN 1603 E T+ ++ I ++ N L++NA+KY+ P ++ + + +F + V+DN Sbjct: 376 TSEGRCTNAYIDKKILRHILYN-LIANAIKYSPPGSK---VCLEVF-CCEEGFVFKVKDN 430 Query: 1604 GIGLPVE 1610 GIG+P+E Sbjct: 431 GIGIPLE 437 Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 42/156 (26%), Positives = 65/156 (41%), Gaps = 27/156 (17%) Query: 267 VTATNIDISERKQAEAALRKSEERWQLAIVGTDEAIWDWDILTNHTYRSDRWFEMLGYER 326 V A N+ SE K S+ +A+V D + Y S + G+ Sbjct: 129 VVAANLSASEAKFRSLVNNSSD---AIAVVKEDGVV---------VYASPSSRTIFGFSP 176 Query: 327 HEM---STFDDEWSIRIHPDDYNRVMAAQAAYLRREVPVYYTEYRLRCKDGNYKWFRSRA 383 E+ + FD IHPDD + +A A L +EYR R KDG++++ S++ Sbjct: 177 QELEGKNVFD-----FIHPDDLSSAIAPFRASLINPDKTQVSEYRFRHKDGSWRYLESKS 231 Query: 384 K---GVWDEQGNPIRLVGSLGDITGRKSIELDLIRS 416 +G +V + DIT RK E D+I + Sbjct: 232 NFSHTALQSRG----IVVTSRDITQRKQAEADIINA 263 Score = 31.6 bits (70), Expect = 0.54, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 8/74 (10%) Query: 1121 VHPDDINR-VEQSVANALEQHSNFEAEYRVIHSDGSVHWLAGKGHGIYDQTGNPVRMLGV 1179 +HPDD++ + A+ + +EYR H DGS +L K + + T R G+ Sbjct: 188 IHPDDLSSAIAPFRASLINPDKTQVSEYRFRHKDGSWRYLESKSN--FSHTALQSR--GI 243 Query: 1180 II---DINDRKQTE 1190 ++ DI RKQ E Sbjct: 244 VVTSRDITQRKQAE 257 >UH38_17840 hypothetical protein Length = 782 Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 5/139 (3%) Query: 1055 ITSRKQAQEALTKSEEQLRLTLEYTHIGNWDWNLHTNEVIWNYNHY-RLLGLDPETSTAS 1113 I+ +Q +E+L SEE+ R E H W + + NE+I+ Y ++ G E+ A Sbjct: 402 ISQLQQVEESLRFSEEKFRQLAENIHEVFWIADPNINEIIYISPAYEQIWGRSCESLYAD 461 Query: 1114 YQAWRGVVHPDDINRV-EQSVANALEQHSNFEAEYRVIHSDGSVHWLAGKGHGIYDQTGN 1172 +W VHP+D +RV + N L + E+R++ +GSV WL + + + G Sbjct: 462 PNSWLEAVHPEDRDRVPHRQQKNTL---GTYNEEFRIVQPNGSVRWLWTRTFPVRNAQGQ 518 Query: 1173 PVRMLGVIIDINDRKQTEQ 1191 R++G+ DI R+Q E+ Sbjct: 519 VYRLVGITQDITARQQAEE 537 Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 4/138 (2%) Query: 274 ISERKQAEAALRKSEERWQLAIVGTDEAIWDWDILTNHT-YRSDRWFEMLGYERHEMSTF 332 IS+ +Q E +LR SEE+++ E W D N Y S + ++ G + Sbjct: 402 ISQLQQVEESLRFSEEKFRQLAENIHEVFWIADPNINEIIYISPAYEQIWGRSCESLYAD 461 Query: 333 DDEWSIRIHPDDYNRVMAAQAAYLRREVPVYYTEYRLRCKDGNYKWFRSRAKGVWDEQGN 392 + W +HP+D +RV Q + + Y E+R+ +G+ +W +R V + QG Sbjct: 462 PNSWLEAVHPEDRDRVPHRQQ---KNTLGTYNEEFRIVQPNGSVRWLWTRTFPVRNAQGQ 518 Query: 393 PIRLVGSLGDITGRKSIE 410 RLVG DIT R+ E Sbjct: 519 VYRLVGITQDITARQQAE 536 Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 2/100 (2%) Query: 182 EYVYHSVGCETVFGYPSQEFFSNKHLWLSQVHPDDVETVIMPGFADIFAAKTFDFEYRFK 241 E +Y S E ++G + +++ + WL VHP+D + V P T++ E+R Sbjct: 439 EIIYISPAYEQIWGRSCESLYADPNSWLEAVHPEDRDRV--PHRQQKNTLGTYNEEFRIV 496 Query: 242 HKDGSLRWIAATHSSRYDPKADCWVVTATNIDISERKQAE 281 +GS+RW+ + + + + DI+ R+QAE Sbjct: 497 QPNGSVRWLWTRTFPVRNAQGQVYRLVGITQDITARQQAE 536 Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 85/349 (24%), Positives = 139/349 (39%), Gaps = 63/349 (18%) Query: 1345 IVYTNPKFEQIFGYEVSELLGQH---ISIINYEDEHTKPIEIHEAIAAAATLHGETTYEV 1401 I+Y +P +EQI+G L + ++ ED P H + E E Sbjct: 440 IIYISPAYEQIWGRSCESLYADPNSWLEAVHPEDRDRVP---HRQQKNTLGTYNE---EF 493 Query: 1402 QNIKKDGTPFWCRATASVFEHPEYGTVF--VAVQQDITEQKQAEEKIKASLKEKEV---- 1455 + ++ +G+ W + + G V+ V + QDIT ++QAEE A +E+E+ Sbjct: 494 RIVQPNGSVRWLWTRTFPVRNAQ-GQVYRLVGITQDITARQQAEETRIALAQERELSDLK 552 Query: 1456 --LLQEIHHRVKNNLGIV---SSLLQMQCRRTQDPQANAILRDSQNRI------------ 1498 + H + L + +++L+ R Q N Q+ + Sbjct: 553 SRFISHASHEFRTPLTAIKMSAAMLEKFSDRATPEQKNRYFEQIQSAVKRLIKLLDDILL 612 Query: 1499 ASIALAHEKLYRSNDLANIDFAQ-YIPDLTTHLFDSYNVKSSCIQLSIQVEETSLDLETA 1557 A A + + L +DF Q + +L DSYN+ C E LD E Sbjct: 613 VGKAEAGKLECKPTVLDLVDFCQVLVEELQLSAGDSYNLNFVC----RGCYEAYLD-ENL 667 Query: 1558 IPCGLIINELVSNALKYAFPNNREGEIQVRLFQQSDRTLTLIVRDNGIGLPVEFDGKKTK 1617 + I+ L+SNA+KY+ + G IQ LF + T T ++D GIG+P E D K Sbjct: 668 LQH--ILTNLLSNAIKYS---PQGGNIQFDLFCNGE-TATFRIQDCGIGIP-EADKAKLF 720 Query: 1618 T---------------LGITLVQGLVQQLRGKLEIQSQ--SGTEFKISF 1649 T LG+ +V+ V+ G + + S GT F + Sbjct: 721 TSFYRCSNTGKLPGTGLGLVIVKDAVELHGGTITVDSTVGVGTTFTVKL 769 Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 6/141 (4%) Query: 536 LRELQEIEIELRESKRFIEQVISHSPQLLYIFEPTTGSNIYLNGQSVDILGYTPEEIKAR 595 + +LQ++E LR S+ Q+ + ++ +I +P IY++ I G + E + A Sbjct: 402 ISQLQQVEESLRFSEEKFRQLAENIHEVFWIADPNINEIIYISPAYEQIWGRSCESLYA- 460 Query: 596 GVKFFLDVLHPDDLYLLERNLNYWQNAADGEVLTTEWRMKHKNGSWRWLRSRDVVFARDE 655 +L+ +HP+D + + Q E+R+ NGS RWL +R R+ Sbjct: 461 DPNSWLEAVHPED----RDRVPHRQQKNTLGTYNEEFRIVQPNGSVRWLWTRTFP-VRNA 515 Query: 656 NHFPCKVLGTTQDITDSKLAE 676 +++G TQDIT + AE Sbjct: 516 QGQVYRLVGITQDITARQQAE 536 Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 2/74 (2%) Query: 990 LQLYHPQDQQKLHQAVERAVSTGESYKLVLRAFKADGSMIYVEGIGHPQFNPQKQVIRLY 1049 L+ HP+D+ ++ ++ +T +Y R + +GS+ ++ P N Q QV RL Sbjct: 466 LEAVHPEDRDRVPHRQQK--NTLGTYNEEFRIVQPNGSVRWLWTRTFPVRNAQGQVYRLV 523 Query: 1050 GTAQDITSRKQAQE 1063 G QDIT+R+QA+E Sbjct: 524 GITQDITARQQAEE 537 >UH38_15980 hypothetical protein Length = 737 Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 54/220 (24%), Positives = 95/220 (43%), Gaps = 12/220 (5%) Query: 985 SYEENLQLYHPQDQQKLHQAVERAVSTGESY-KLVLRAFKADGSMIYVEGIGHPQFNPQK 1043 S+ ++ + Y+PQ+ + R++ TGE + + DG+ + P N Sbjct: 282 SFHQDGRPYNPQEL-----PLARSILTGEVVIEEEIDFLGGDGTRGTMLVSSAPIRNATG 336 Query: 1044 QVIRLYGTAQDITSRKQAQEALTKSEEQLRLTLEYTHIGNWDWNLHTNEVIWNYNHYRLL 1103 V T DI+ RKQA++ L + E +LR E +G + + + N + Sbjct: 337 NVTAGVVTFSDISDRKQAEKELRRREAELRFLNEALPVGIFRLDPQGSCTYTNPRAGEIC 396 Query: 1104 GLDPETSTASYQAWRGVVHPDDINRVEQSVANALEQHSNFEAEYRVIHSDGSVHWLAGKG 1163 G + + + WR +HPDD+ + A+ H F E R +H DG+V + K Sbjct: 397 GFTFDEALGT--GWRKFIHPDDVAPLWSQWLPAVAAHQEFSGEVRYLHPDGTVRFGRVKV 454 Query: 1164 HGIYDQTGNPVRMLGVIIDINDRKQTEQALREKEHFLSSI 1203 I+ N + +G I DI + + E+ K F+S + Sbjct: 455 APIFS-CSNAIGYVGTIEDITEIRAVEKM---KNEFISVV 490 Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 79/182 (43%), Gaps = 20/182 (10%) Query: 237 EYRFKHKDGSLRWIAATHSSRYDPKADCWVVTATNIDISERKQAEAALRKSEERWQLAIV 296 E F DG+ + + + + + T DIS+RKQAE LR+ E + Sbjct: 311 EIDFLGGDGTRGTMLVSSAPIRNATGNVTAGVVTFSDISDRKQAEKELRRREAELRFLNE 370 Query: 297 GTDEAIWDWDILTNHTYRSDRWFEMLGYERHEMSTFDDE----WSIRIHPDD----YNRV 348 I+ D + TY + R E+ G+ TFD+ W IHPDD +++ Sbjct: 371 ALPVGIFRLDPQGSCTYTNPRAGEICGF------TFDEALGTGWRKFIHPDDVAPLWSQW 424 Query: 349 MAAQAAYLRREVPVYYTEYRLRCKDGNYKWFRSRAKGVWDEQGNPIRLVGSLGDITGRKS 408 + A AA+ + E R DG ++ R + ++ N I VG++ DIT ++ Sbjct: 425 LPAVAAHQE-----FSGEVRYLHPDGTVRFGRVKVAPIFS-CSNAIGYVGTIEDITEIRA 478 Query: 409 IE 410 +E Sbjct: 479 VE 480 Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 19/179 (10%) Query: 501 DGTLIDVEVNSHPI--AWLGKPAKFALAKDITAQKAALRELQEIEIELRESKRFIEQVIS 558 DGT + V+S PI A A DI+ +K A +EL+ E ELR F+ + + Sbjct: 318 DGTRGTMLVSSAPIRNATGNVTAGVVTFSDISDRKQAEKELRRREAELR----FLNEAL- 372 Query: 559 HSPQLLYIFEPTTGSNIYLNGQSVDILGYTPEEIKARGVKFFLDVLHPDDLYLLERNLNY 618 P ++ +P GS Y N ++ +I G+T +E G + F +HPDD+ L + Sbjct: 373 --PVGIFRLDPQ-GSCTYTNPRAGEICGFTFDEALGTGWRKF---IHPDDVAPL---WSQ 423 Query: 619 WQNA-ADGEVLTTEWRMKHKNGSWRWLRSRDVVFARDENHFPCKVLGTTQDITDSKLAE 676 W A A + + E R H +G+ R+ R + N +GT +DIT+ + E Sbjct: 424 WLPAVAAHQEFSGEVRYLHPDGTVRFGRVKVAPIFSCSNAI--GYVGTIEDITEIRAVE 480 Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 88/394 (22%), Positives = 159/394 (40%), Gaps = 67/394 (17%) Query: 1266 IEAGETITYEEYLYLKNQDT--WWITNLTPLRDENLNIYRIIGSGINITEQKRAQQMLEL 1323 I GE + EE +L T + + P+R+ N+ + + +I+++K+A++ L Sbjct: 301 ILTGEVVIEEEIDFLGGDGTRGTMLVSSAPIRNATGNVTAGVVTFSDISDRKQAEKELRR 360 Query: 1324 QAVVTRNMAEGL--CLVRAS-DGVIVYTNPKFEQIFGYEVSELLGQHISIINYEDEHTKP 1380 + R + E L + R G YTNP+ +I G+ E LG + D+ P Sbjct: 361 REAELRFLNEALPVGIFRLDPQGSCTYTNPRAGEICGFTFDEALGTGWRKFIHPDD-VAP 419 Query: 1381 IEIHEAIAAAATLHGETTYEVQNIKKDGTPFWCRATASVFEHPEYGTVFVAVQQDITEQK 1440 + A AA H E + EV+ + DGT + R + +V +DITE Sbjct: 420 LWSQWLPAVAA--HQEFSGEVRYLHPDGTVRFGRVKVAPIFSCSNAIGYVGTIEDITE-- 475 Query: 1441 QAEEKIKASLKEKEVLLQEIHHRVKNNLGIVSSLLQMQCRRTQDPQANAILRD----SQN 1496 I+A K K + + H ++ L + + + + +L D +Q Sbjct: 476 -----IRAVEKMKNEFISVVSHELRTPLASIRGAIGL--------LSAGLLVDEPETAQE 522 Query: 1497 RIASIALAHEKLYR-SNDLANID-FAQYIPDLTTHLFDSYNV-KSSCIQLSIQVEETSLD 1553 + +L E+L R ND+ +++ + L D+ + + S L + E+ ++ Sbjct: 523 MLEIASLDTERLVRLVNDILDLERLESHKLTLIKRWCDAAALMRQSVESLQLVTEQNNVT 582 Query: 1554 LETAI--------PCGLI--INELVSNALKYAFP----------NNRE---GEIQVRL-- 1588 L + P +I + L+SNA+K++ P +RE GE +VR Sbjct: 583 LSFTLRSRQIYVDPDRIIQTLVNLLSNAIKFSSPGATVWLSADLGSRESGVGETEVRALG 642 Query: 1589 ------------FQQSDRTLTLIVRDNGIGLPVE 1610 +Q L V+D G G+P + Sbjct: 643 KLGEKTQLPITNYQSPTPELLFTVKDTGRGIPAD 676 Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 6/205 (2%) Query: 1143 FEAEYRVIHSDGSVHWLAGKGHGIYDQTGNPVRMLGVIIDINDRKQTEQALREKEHFLSS 1202 E E + DG+ + I + TGN + DI+DRKQ E+ LR +E L Sbjct: 308 IEEEIDFLGGDGTRGTMLVSSAPIRNATGNVTAGVVTFSDISDRKQAEKELRRREAELRF 367 Query: 1203 IYDGVANSIFVVDVVNGDFRFMGLNPAHEQLTGFISHELQGKTPEQVLPPILAATVRQHY 1262 + + + IF +D G + NP ++ GF E G + + P A + + Sbjct: 368 LNEALPVGIFRLD-PQGSCTYT--NPRAGEICGFTFDEALGTGWRKFIHPDDVAPLWSQW 424 Query: 1263 QDCIEAGETITYE-EYLYLKNQDTWWITNLTPLRDENLNIYRIIGSGINITEQKRAQQML 1321 + A + + E YL+ + + P+ + N +G+ +ITE + ++M Sbjct: 425 LPAVAAHQEFSGEVRYLHPDGTVRFGRVKVAPIFSCS-NAIGYVGTIEDITEIRAVEKMK 483 Query: 1322 -ELQAVVTRNMAEGLCLVRASDGVI 1345 E +VV+ + L +R + G++ Sbjct: 484 NEFISVVSHELRTPLASIRGAIGLL 508 Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust. Identities = 39/144 (27%), Positives = 58/144 (40%), Gaps = 26/144 (18%) Query: 108 PVLDDQGGVLC-VVTLEEVK-TAQLEQEVVRREQMSELLLQSDAQYQTSEARFNDILNSA 165 P+ + G V VVT ++ Q E+E+ RRE +E RF LN A Sbjct: 330 PIRNATGNVTAGVVTFSDISDRKQAEKELRRRE---------------AELRF---LNEA 371 Query: 166 ISTCIVCFRVFTNFDWEYVYHSVGCETVFGYPSQEFFSNKHLWLSQVHPDDVETVIMPGF 225 + I FR+ Y G + G+ E W +HPDDV + Sbjct: 372 LPVGI--FRLDPQGSCTYTNPRAG--EICGFTFDEALGTG--WRKFIHPDDVAPLWSQWL 425 Query: 226 ADIFAAKTFDFEYRFKHKDGSLRW 249 + A + F E R+ H DG++R+ Sbjct: 426 PAVAAHQEFSGEVRYLHPDGTVRF 449 Score = 34.7 bits (78), Expect = 0.055, Method: Compositional matrix adjust. Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 11/149 (7%) Query: 789 LVRVTDISQRKLAEIALHEREMMLRSIGDNLPNGAVYQIVRELDGSDRFSYFSAGIERLM 848 +V +DIS RK AE L RE LR + + LP G + LD +Y + + Sbjct: 342 VVTFSDISDRKQAEKELRRREAELRFLNEALPVG-----IFRLDPQGSCTYTNPRAGEIC 396 Query: 849 EVRAEDVLADATLLYRQLCAED--IPSFVQAVEESYCHLSVFDIQLRVCTPSGMWKWVQL 906 ++ L +R+ D P + Q + H F ++R P G ++ ++ Sbjct: 397 GFTFDEALGTG---WRKFIHPDDVAPLWSQWLPAVAAHQE-FSGEVRYLHPDGTVRFGRV 452 Query: 907 RSTPRQLPDGRVAWDGLIVDVTDIKHTEE 935 + P + + G I D+T+I+ E+ Sbjct: 453 KVAPIFSCSNAIGYVGTIEDITEIRAVEK 481 >UH38_21115 hypothetical protein Length = 1788 Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 37/170 (21%) Query: 1182 DINDRKQTEQALREKEHFLSSIYDGVANSIFVVDVVNGDFRFMGLNPAHEQLTGFISHEL 1241 + +RKQ E AL+++ +F+S+I D + + V+D RF N + EQ TG+ E+ Sbjct: 385 EFTERKQIEIALKKERNFISAIIDTASALVVVLDAQGKIVRF---NSSCEQTTGYSFDEV 441 Query: 1242 QGKTPEQVLPPILAATVRQHYQDCIEAGETITYEEYLYLKNQDT--------WWIT---- 1289 + + ++ D GE + + L+ + T +W T Sbjct: 442 RDR----------------YFWDLFLIGEELEAVKNLFTQLSQTKFPNEHENYWRTKDGN 485 Query: 1290 ------NLTPLRDENLNIYRIIGSGINITEQKRAQQMLELQAVVTRNMAE 1333 + + L + + II +GI+I+E+KRA+Q L +Q VTR +AE Sbjct: 486 RRRIAWSNSALFNNQGEVEYIISTGIDISERKRAEQRLLVQHAVTRILAE 535 Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 48/183 (26%), Positives = 79/183 (43%), Gaps = 7/183 (3%) Query: 1144 EAEYRVIHSDGSVHWLAGKGHGIYDQTGNPVRMLGVIIDINDRKQTEQALREKEHFLSSI 1203 E E+ I DGS + + D N + + DI RKQ AL+ E + Sbjct: 784 EREWSFIRQDGSKFPVMLSVTALRDSNDNITGFIAIASDITQRKQALLALQSSEERFQTF 843 Query: 1204 YDGVANSIFVVDVVNGDFRFMGLNPAHEQLTGFISHELQGKTPEQVLPPILAATVRQHYQ 1263 + NS + + + + R++ +N E S +L GKT LP +A VR + Sbjct: 844 MN---NSPVIAFIKDEEGRYVYVNEPLESAFNISSADLLGKTDFDWLPLKVANQVRHNDL 900 Query: 1264 DCIEAGETITYEEYLYLKNQ--DTWWITNLTPLRDENLNIYRIIGSGINITEQKRAQQML 1321 +T E + L + W + L L ++ + + G GI+ITE+K+A++ L Sbjct: 901 TVFSTEKTCQAIESVTLADGCLHHWLV--LKFLIKDSSDRPMLGGVGIDITERKQAEEAL 958 Query: 1322 ELQ 1324 LQ Sbjct: 959 NLQ 961 Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 18/134 (13%) Query: 175 VFTNFDWEYVYHSVGCETVFGYPSQEFFSNK-----HLWLSQVH------PDDVETVIMP 223 V T D + + GY SQ+ H W S+V ++ I P Sbjct: 710 VSTELDGTITTFNAAAQKALGYSSQKVIGKTTPAIFHDW-SEVEQRAEELSQELGITIEP 768 Query: 224 GFADIFAAKTF-----DFEYRFKHKDGSLRWIAATHSSRYDPKADCWVVTATNIDISERK 278 GF ++ AK + E+ F +DGS + + ++ D + A DI++RK Sbjct: 769 GF-EVLVAKARHGEIEEREWSFIRQDGSKFPVMLSVTALRDSNDNITGFIAIASDITQRK 827 Query: 279 QAEAALRKSEERWQ 292 QA AL+ SEER+Q Sbjct: 828 QALLALQSSEERFQ 841 Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 5/123 (4%) Query: 164 SAISTCIVCFRVFTNFDWEYVYHSVGCETVFGYPSQEFFSNKHLWLSQVHPDDVETVIMP 223 SAI V + + V + CE GY E +++ W + +++E V Sbjct: 404 SAIIDTASALVVVLDAQGKIVRFNSSCEQTTGYSFDEV-RDRYFWDLFLIGEELEAV--K 460 Query: 224 GFADIFAAKTFDFEYR--FKHKDGSLRWIAATHSSRYDPKADCWVVTATNIDISERKQAE 281 + F E+ ++ KDG+ R IA ++S+ ++ + + + +T IDISERK+AE Sbjct: 461 NLFTQLSQTKFPNEHENYWRTKDGNRRRIAWSNSALFNNQGEVEYIISTGIDISERKRAE 520 Query: 282 AAL 284 L Sbjct: 521 QRL 523 Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust. Identities = 45/151 (29%), Positives = 65/151 (43%), Gaps = 21/151 (13%) Query: 1052 AQDITSRKQAQEALTKSEEQLRLTLEYTHI--------GNWDWNLHTNEVIWNYNHYRLL 1103 A DIT RKQA AL SEE+ + + + + G + + E +N + LL Sbjct: 820 ASDITQRKQALLALQSSEERFQTFMNNSPVIAFIKDEEGRYVYVNEPLESAFNISSADLL 879 Query: 1104 GLDPETSTASYQAWRGVVHPDDINRVEQSVANALEQHSNFEAEYRVIHSDGSV-HWLAGK 1162 G + + V H D + A+E V +DG + HWL K Sbjct: 880 G-KTDFDWLPLKVANQVRHNDLTVFSTEKTCQAIES---------VTLADGCLHHWLVLK 929 Query: 1163 GHGIYDQTGNPVRMLGVIIDINDRKQTEQAL 1193 I D + P+ + GV IDI +RKQ E+AL Sbjct: 930 -FLIKDSSDRPM-LGGVGIDITERKQAEEAL 958 Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust. Identities = 76/321 (23%), Positives = 116/321 (36%), Gaps = 48/321 (14%) Query: 178 NFDWEYVYHSVGCETVFGYP---------SQEFFSNKHLWLSQVHPDDVETVIMPGFADI 228 NF V G + FG+P + FFS K SQ PD P ++ Sbjct: 623 NFHRTKVALESGLHSAFGFPIHSGSDFLGAMVFFSRK----SQ-QPD-------PELLEM 670 Query: 229 FAAKTFDFEYRFKHKDGSLRWIAATHSSRYDPKADCWVVTATNIDISERKQAEAALRKSE 288 AA K K + T R + + + +T +D + AA + Sbjct: 671 MAAIGSQIGQFMKRKQAEVALQHTTTLQRAILDSANYAIVSTELDGTITTFNAAAQKALG 730 Query: 289 ERWQLAIVGTDEAIW-DWDILTNHTYRSDRWFEMLGYERHEMSTFDDEWSIRIHPDDYNR 347 Q I T AI+ DW + R++ + LG I I P Sbjct: 731 YSSQKVIGKTTPAIFHDW---SEVEQRAEELSQELG--------------ITIEPG--FE 771 Query: 348 VMAAQAAYLRREVPVYYTEYRLRCKDGNYKWFRSRAKGVWDEQGNPIRLVGSLGDITGRK 407 V+ A+A R + E+ +DG+ + D N + DIT RK Sbjct: 772 VLVAKA----RHGEIEEREWSFIRQDGSKFPVMLSVTALRDSNDNITGFIAIASDITQRK 827 Query: 408 SIELDLIRSETQYRLLFENNPNPMWIFDPETLSFLAVNQAAIYKYGYSQAEFLSMTVLDI 467 L L SE +++ N+P +I D E ++ VN+ + S A+ L T D Sbjct: 828 QALLALQSSEERFQTFMNNSPVIAFIKDEEG-RYVYVNEPLESAFNISSADLLGKTDFDW 886 Query: 468 CPREKIPALLRSMSDFGVFSS 488 P K+ +R +D VFS+ Sbjct: 887 LPL-KVANQVRH-NDLTVFST 905 Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust. Identities = 44/199 (22%), Positives = 82/199 (41%), Gaps = 21/199 (10%) Query: 747 VIEELNHQGFWSREVEYITKQGKFFWGNLAVKQIYVAGEEI--HLVRVTDISQRKLAEIA 804 ++ + H RE +I + G F L+V + + + I + +DI+QRK A +A Sbjct: 773 LVAKARHGEIEEREWSFIRQDGSKFPVMLSVTALRDSNDNITGFIAIASDITQRKQALLA 832 Query: 805 LHEREMMLRSIGDNLPNGAVYQIVRELDGSDRFSYFSAGIERLMEVRAEDVLADATL--- 861 L E ++ +N P V +++ +G R+ Y + +E + + D+L Sbjct: 833 LQSSEERFQTFMNNSP---VIAFIKDEEG--RYVYVNEPLESAFNISSADLLGKTDFDWL 887 Query: 862 ---LYRQLCAEDIPSFVQAVEESYCHLSVFDIQLRVCTPSGMWKWVQLRSTPRQLPDGRV 918 + Q+ D+ F E C I+ + W+ L+ + D R Sbjct: 888 PLKVANQVRHNDLTVF---STEKTCQA----IESVTLADGCLHHWLVLKFLIKDSSD-RP 939 Query: 919 AWDGLIVDVTDIKHTEETL 937 G+ +D+T+ K EE L Sbjct: 940 MLGGVGIDITERKQAEEAL 958 Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust. Identities = 39/145 (26%), Positives = 59/145 (40%), Gaps = 14/145 (9%) Query: 152 QTSEARFNDILNSAISTCIVCFRVFTNFDWEYVYHSVGCETVFGYPSQEFFSNKHL-WLS 210 Q+SE RF +N+ + ++ F + + YVY + E+ F S + WL Sbjct: 834 QSSEERFQTFMNN---SPVIAF--IKDEEGRYVYVNEPLESAFNISSADLLGKTDFDWL- 887 Query: 211 QVHPDDVETVIMPGFADIFAA-KTFDFEYRFKHKDGSLR-WIAATHSSRYDPKADCWVVT 268 P V + +F+ KT DG L W+ + +D ++ Sbjct: 888 ---PLKVANQVRHNDLTVFSTEKTCQAIESVTLADGCLHHWLVLKFLIK--DSSDRPMLG 942 Query: 269 ATNIDISERKQAEAALRKSEERWQL 293 IDI+ERKQAE AL R QL Sbjct: 943 GVGIDITERKQAEEALNLQNLRSQL 967 Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust. Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 18/171 (10%) Query: 1297 ENLNIYRIIGSGIN-ITEQKRAQQMLELQAVVTRNMAEGLCLVRAS---DGVIVYTNPKF 1352 E L + IGS I ++K+A+ L+ + R + + S DG I N Sbjct: 666 ELLEMMAAIGSQIGQFMKRKQAEVALQHTTTLQRAILDSANYAIVSTELDGTITTFNAAA 725 Query: 1353 EQIFGYEVSELLGQHISIINYE------------DEHTKPIEIHEAIAAAATLHGETT-Y 1399 ++ GY +++G+ I ++ E IE + A HGE Sbjct: 726 QKALGYSSQKVIGKTTPAIFHDWSEVEQRAEELSQELGITIEPGFEVLVAKARHGEIEER 785 Query: 1400 EVQNIKKDGTPFWCRATASVF-EHPEYGTVFVAVQQDITEQKQAEEKIKAS 1449 E I++DG+ F + + + + T F+A+ DIT++KQA +++S Sbjct: 786 EWSFIRQDGSKFPVMLSVTALRDSNDNITGFIAIASDITQRKQALLALQSS 836 >UH38_00660 histidine kinase Length = 997 Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 61/263 (23%), Positives = 108/263 (41%), Gaps = 52/263 (19%) Query: 1430 VAVQQDITEQKQAEEKIKASLKEKEVLLQEIHHRVKNNLGIVSSLLQMQCRRTQDPQANA 1489 +A + +++Q E + + K + H + L ++ L+ DP Sbjct: 327 IATARSYEQERQRAEALAELDRAKTAFFSNVSHEFRTPLTLILGPLEDALTDLADPL--- 383 Query: 1490 ILRDSQNRIASIALAHEKLYRSNDLAN--IDFAQYIPDLTTHLFDSYNVKSSCIQLSI-- 1545 S N+ I + R L N +DF++ D T+ +++ ++ + +L+ Sbjct: 384 ----SPNQRQRIEVMQRNGLRLLKLVNTLLDFSRIESDRTSAVYEPIDLATFTAELASVF 439 Query: 1546 --QVEETSLDLETAIPCGL--------------IINELVSNALKYAFPNNREGEIQVRLF 1589 +E L L + C I+ L+SNA K+ F GEI VRL Sbjct: 440 RSAIERAGLRL--VVDCSPLPEFVYVDREMWEKIVLNLISNAFKFTF----AGEIAVRL- 492 Query: 1590 QQSDRTLTLIVRDNGIGLPV-----------EFDGKKTKT-----LGITLVQGLVQQLRG 1633 Q + L V+D GIG+P + G + +T +G++LVQ LV+ G Sbjct: 493 HQIGSFVELAVQDTGIGIPEAEIERLFERFHQVKGAQGRTFEGSGIGLSLVQQLVKLHGG 552 Query: 1634 KLEIQSQ--SGTEFKISFTTGRV 1654 +++ S G+ F++S TG V Sbjct: 553 TVQVSSALGEGSCFRVSIPTGCV 575 Score = 32.0 bits (71), Expect = 0.38, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 23/104 (22%) Query: 1563 IINELVSNALKYAFPNNREGEIQVRLFQQSDRTLTLIVRDNGIG-----LPVEFD----- 1612 +I L+ NA+K+ + GE+ +RL ++ D + + V D GIG LP FD Sbjct: 889 VIANLLDNAIKF---TPQGGEVTIRL-ERLDSDIEITVSDTGIGIRPDFLPNVFDRFTQA 944 Query: 1613 ---GKKTK---TLGITLVQGLVQQLRGKLEIQSQS---GTEFKI 1647 + T +G+ + + LVQ G +E+ S GT F I Sbjct: 945 EVPSRHTPGGVGIGLAIARHLVQLHGGTIEVASLGEGQGTTFTI 988 >UH38_18370 ATPase Length = 405 Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 40/115 (34%), Positives = 57/115 (49%), Gaps = 23/115 (20%) Query: 1554 LETAIPCGLIINELVSNALKYAFPNNREGEIQVRLFQQSDRTLTLIVRDNGIGLPVE--- 1610 L A+ II LVSNA++Y +G IQ+ SD+ LIV D GIG+ E Sbjct: 281 LTDALRLQQIITNLVSNAIRYT----EKGNIQIASQTISDKEWELIVADTGIGITEEDQK 336 Query: 1611 --FD-----GKKTKT-------LGITLVQGLVQQLRGKLEIQSQ--SGTEFKISF 1649 FD G ++ LG+ +V L+Q L+G+ E+ SQ G+ FK+ F Sbjct: 337 LVFDPYYRVGDNSRAYLPNSTGLGLAIVSQLIQLLQGRCELTSQVGVGSTFKVIF 391 >UH38_02980 diguanylate phosphodiesterase Length = 568 Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 3/112 (2%) Query: 1337 LVRASDGVIVYTNPKFEQIFGYEVSELLGQHISIINYEDEHTKPIEIHEAIAAAATLHGE 1396 L A+DG IV N + GY EL+ + S + YE + ++ +I + E Sbjct: 26 LTIAADGKIVSINQYGAEALGYRKEELMDRDFSCLVYESDREHFQQLFTSIFSEKLALVE 85 Query: 1397 TTYEVQNIKKDGTPFWCRATASVFEHPEYGTV-FVAVQQDITEQKQAEEKIK 1447 T EV+ I+KDG+ W R + + + + + + +DITE+KQ EE+++ Sbjct: 86 T--EVRKIRKDGSVIWERQRSQLISNDDGEPLELRMICRDITERKQVEEQLR 135 Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 10/132 (7%) Query: 283 ALRKSEERWQ-LAIVGTDEAI---WDWDILTNHTYRSDRWFEMLGYERHEMSTFDDEWSI 338 AL++SEE +Q L D + D I++ + Y + E LGY + E+ D ++S Sbjct: 6 ALQESEELYQNLYDFAPDAYLTIAADGKIVSINQYGA----EALGYRKEEL--MDRDFSC 59 Query: 339 RIHPDDYNRVMAAQAAYLRREVPVYYTEYRLRCKDGNYKWFRSRAKGVWDEQGNPIRLVG 398 ++ D + ++ + TE R KDG+ W R R++ + ++ G P+ L Sbjct: 60 LVYESDREHFQQLFTSIFSEKLALVETEVRKIRKDGSVIWERQRSQLISNDDGEPLELRM 119 Query: 399 SLGDITGRKSIE 410 DIT RK +E Sbjct: 120 ICRDITERKQVE 131 Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 2/78 (2%) Query: 1138 EQHSNFEAEYRVIHSDGSVHWLAGKGHGIYDQTGNPVRMLGVIIDINDRKQTEQALREKE 1197 E+ + E E R I DGSV W + I + G P+ + + DI +RKQ E+ LR + Sbjct: 79 EKLALVETEVRKIRKDGSVIWERQRSQLISNDDGEPLELRMICRDITERKQVEEQLR--Q 136 Query: 1198 HFLSSIYDGVANSIFVVD 1215 + G+ N I +D Sbjct: 137 NAFHDALTGLPNRILFMD 154 Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust. Identities = 41/170 (24%), Positives = 72/170 (42%), Gaps = 16/170 (9%) Query: 546 LRESKRFIEQVISHSPQLLYIFEPTTGSNIYLNGQSVDILGYTPEEIKARGVKFFLDVLH 605 L+ES+ + + +P Y+ G + +N + LGY EE+ R F V Sbjct: 7 LQESEELYQNLYDFAPDA-YLTIAADGKIVSINQYGAEALGYRKEELMDR--DFSCLVYE 63 Query: 606 PDDLYLLERNLNYWQNAADGEVLTTEWRMKHKNGSWRWLRSRDVVFARDENHFPCKVLGT 665 D + + + + ++ TE R K+GS W R R + + D+ P ++ Sbjct: 64 SDREHFQQLFTSIFSEKL--ALVETEVRKIRKDGSVIWERQRSQLISNDDGE-PLELRMI 120 Query: 666 TQDITDSKLAELEIIHSRDLLEAIYNGSTDALFLVNPQTLLIIDCNQQAV 715 +DIT+ K E ++ N DAL + P +L +D +QA+ Sbjct: 121 CRDITERKQVEEQLRQ---------NAFHDALTGL-PNRILFMDRLEQAI 160 >UH38_00065 histidine kinase Length = 418 Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 34/131 (25%) Query: 1548 EETSLDLETAIPCGL------------IINELVSNALKYAFPNNREGEIQVRLFQQSDRT 1595 +E +L L IP L I + L+ NALKY P+ GEI ++ +Q DR Sbjct: 285 QERNLQLIAEIPANLPPVKADRAALREIFSNLIDNALKYT-PSG--GEIYIQSGKQRDRA 341 Query: 1596 LTLIVRDNGIGLPVEFDGK---------------KTKTLGITLVQGLVQQLRGKLEI--- 1637 + + D G+G+P GK LG+ +V+ LV+Q++G++E+ Sbjct: 342 QGIEISDTGLGIPPADLGKIFERHYRGVQENSAIAGTGLGLAIVKELVEQMQGEIEVFSP 401 Query: 1638 -QSQSGTEFKI 1647 Q+ SG++F + Sbjct: 402 AQNGSGSKFVV 412 >UH38_06465 chemotaxis protein CheY Length = 681 Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 10/141 (7%) Query: 275 SERKQAEAALRKSEERWQLAIVGTDEAIWDWDILTNHTYRSDRWFEMLGYERHEMSTFDD 334 ++ K A A LRKSE+R++ + I+ D+ N TY + R + G Sbjct: 139 AQLKLANAELRKSEQRFRCLSASSPIGIFLTDVAGNCTYTNPRCQTICGLALE--GNLQQ 196 Query: 335 EWSIRIHPDDYNRVMAAQAAYL--RREVPVYYTEYRLRCKDGNYKWFRS---RAKGVWDE 389 +HP D +RV+ L +RE +E+RL+ R+ R+ + E Sbjct: 197 NLLAIVHPKDCDRVLTDWLICLEGKREC---VSEFRLQIPQHTGICDRTVNLRSSPMLSE 253 Query: 390 QGNPIRLVGSLGDITGRKSIE 410 QG I VG++ DIT RK E Sbjct: 254 QGVVIGYVGTVEDITQRKQSE 274 Score = 35.0 bits (79), Expect = 0.050, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 56/135 (41%), Gaps = 5/135 (3%) Query: 1059 KQAQEALTKSEEQLRLTLEYTHIGNWDWNLHTNEVIWNYNHYRLLGLDPETSTASYQAWR 1118 K A L KSE++ R + IG + ++ N N + GL E + Q Sbjct: 142 KLANAELRKSEQRFRCLSASSPIGIFLTDVAGNCTYTNPRCQTICGLALEGNL--QQNLL 199 Query: 1119 GVVHPDDINRVEQSVANALEQHSNFEAEYRV---IHSDGSVHWLAGKGHGIYDQTGNPVR 1175 +VHP D +RV LE +E+R+ H+ + + + + G + Sbjct: 200 AIVHPKDCDRVLTDWLICLEGKRECVSEFRLQIPQHTGICDRTVNLRSSPMLSEQGVVIG 259 Query: 1176 MLGVIIDINDRKQTE 1190 +G + DI RKQ+E Sbjct: 260 YVGTVEDITQRKQSE 274 >UH38_00395 hypothetical protein Length = 784 Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 21/187 (11%) Query: 1146 EYRVIHSDGSVHWLAGKGHGIYDQTGNPVRMLGVIIDINDRKQTEQALREKEHFLSSIYD 1205 E+++I SDG + ++ + Q GN +R V+IDI+DRK+ E+ RE+ +++ D Sbjct: 238 EFQMIRSDGKIIPVSVSATALTSQ-GNFLRSRFVVIDISDRKRAEEKNREQ----AALLD 292 Query: 1206 GVANSIFVVDVVNGDFRFMGLNPAHEQLTGFISHELQGKTPEQVLPPILAATVRQHYQDC 1265 ++IFV D+ +R + N E+L S + GK ++L A R + D Sbjct: 293 ITTDAIFVQDL---KYRILFWNKGAERLYERESAAVLGKNAIELLYQ--AGETRSQFAD- 346 Query: 1266 IEAGETITYEE-------YLYLKNQDTWWITNLTPLRDENLNIYRIIGSGINITEQKRAQ 1318 IE T+ +E L + + T +RDE N I+ +ITE+K+ + Sbjct: 347 IEI--TLLQQEQWQGELQQLTFSGKTIVVASRWTLVRDEAGNPKSILTVNTDITEKKQLE 404 Query: 1319 -QMLELQ 1324 Q L +Q Sbjct: 405 RQFLRVQ 411 Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 68/252 (26%), Positives = 108/252 (42%), Gaps = 50/252 (19%) Query: 537 RELQEIEIELRESKRFIEQVISHSPQLLYIFEPTTGSNIYLNGQSVDILGYTPEEIKARG 596 REL + LRE +E++ +++P + + G + +N + +LGY +EI G Sbjct: 149 RELSDANNALREYALELEELYNYAPCGYHSLDKH-GVFVRINDTELKMLGYERDEII--G 205 Query: 597 VKFFLDVLHPDDLY-------LLE-----RNLNYWQNAADGEVLTTEWRMKHKNGSWRWL 644 K F D+L D L LL+ RNL + +DG+++ +L Sbjct: 206 KKTFADLLTADSLPTFHANFPLLQQQGWVRNLEFQMIRSDGKIIPVSVSATALTSQGNFL 265 Query: 645 RSRDVVFARDENHFPCKVLGTTQDITDSKLAELEIIHSRDLLEAIYNGSTDALFLVNPQT 704 RSR VV DI+D K AE + LL+ +TDA+F V Sbjct: 266 RSRFVVI----------------DISDRKRAEEKNREQAALLDI----TTDAIF-VQDLK 304 Query: 705 LLIIDCNQQAVQVF-----AASGKE--ELIGSDGQTLQKQRFTPDEVTSVIEELNHQGFW 757 I+ N+ A +++ A GK EL+ G+T + +F E+T L Q W Sbjct: 305 YRILFWNKGAERLYERESAAVLGKNAIELLYQAGET--RSQFADIEIT-----LLQQEQW 357 Query: 758 SREVEYITKQGK 769 E++ +T GK Sbjct: 358 QGELQQLTFSGK 369 Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust. Identities = 57/233 (24%), Positives = 94/233 (40%), Gaps = 23/233 (9%) Query: 1017 LVLRAFKADGSMIYVEGIGHPQFNPQKQVIRLYGTAQDITSRKQAQEALTKSEEQLRLTL 1076 L + ++DG +I V + Q +R DI+ RK+A+E K+ EQ L L Sbjct: 237 LEFQMIRSDGKIIPV-SVSATALTSQGNFLRSRFVVIDISDRKRAEE---KNREQAAL-L 291 Query: 1077 EYTHIGNWDWNLHTNEVIWNYNHYRLLGLDPETSTAS------YQAWRGVVHPDDINRVE 1130 + T + +L + WN RL + YQA DI Sbjct: 292 DITTDAIFVQDLKYRILFWNKGAERLYERESAAVLGKNAIELLYQAGETRSQFADIEIT- 350 Query: 1131 QSVANALEQHSNFEAEYRVIHSDGSVHWLAGKGHGIYDQTGNPVRMLGVIIDINDRKQTE 1190 L Q ++ E + + G +A + + D+ GNP +L V DI ++KQ E Sbjct: 351 ------LLQQEQWQGELQQLTFSGKTIVVASRWTLVRDEAGNPKSILTVNTDITEKKQLE 404 Query: 1191 -QALR-EKEHFLSSIYDGVA---NSIFVVDVVNGDFRFMGLNPAHEQLTGFIS 1238 Q LR ++ L ++ G+A N+I + M ++ EQ G ++ Sbjct: 405 RQFLRVQRLESLGTLASGIAHDFNNILTPILAAVQLLPMKVSSLDEQSLGLLT 457 Score = 34.7 bits (78), Expect = 0.071, Method: Compositional matrix adjust. Identities = 53/228 (23%), Positives = 94/228 (41%), Gaps = 46/228 (20%) Query: 276 ERKQAEAALRKSEERWQLA---IVGTDEAIWDWDILTNHTYR------------------ 314 +R+ AE ALR S+ER Q+ + + A+ ++ + Y Sbjct: 129 QRRSAEQALRASQERIQMQARELSDANNALREYALELEELYNYAPCGYHSLDKHGVFVRI 188 Query: 315 SDRWFEMLGYERHEM---STFDDEWSIRIHPDDYNRVMAAQAAYLRREVPVYYTEYRLRC 371 +D +MLGYER E+ TF D + P A L+++ V E+++ Sbjct: 189 NDTELKMLGYERDEIIGKKTFADLLTADSLP-----TFHANFPLLQQQGWVRNLEFQMIR 243 Query: 372 KDGNYKWFRSRAKGVWDEQGNPIRLVGSLGDITGRKSIE---------LDLIRS-----E 417 DG A + QGN +R + DI+ RK E LD+ + Sbjct: 244 SDGKIIPVSVSATAL-TSQGNFLRSRFVVIDISDRKRAEEKNREQAALLDITTDAIFVQD 302 Query: 418 TQYRLLFENNPNPMWIFDPETLSFLAVNQAA-IYKYGYSQAEFLSMTV 464 +YR+LF N +++ E+ + L N +Y+ G ++++F + + Sbjct: 303 LKYRILFWNK-GAERLYERESAAVLGKNAIELLYQAGETRSQFADIEI 349 >UH38_16020 phosphoribulokinase Length = 146 Score = 42.7 bits (99), Expect = 3e-05, Method: Composition-based stats. Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 28/130 (21%) Query: 18 LMMPPNTPVAEAIAQMYQAQTSCVLVIAKD-ELRGILTQTDVL---RGIA---------- 63 +++ P TP+ EAIA + + + S + V+ D L GI+++TD++ G+ Sbjct: 6 VVVKPQTPLNEAIAILAERRVSGLPVVDDDNRLVGIISETDLMWQETGVTPPAYIMFLDS 65 Query: 64 -----NRMTFA-DL------TVGELMSQPVVTVHEAELEDLPNILQRFHQHQIRHLPVLD 111 N T+ DL TVGE+MS+ VT+ A + L Q H +R LPV+D Sbjct: 66 VIFLKNPATYERDLHKALGQTVGEVMSKDPVTI--APDKPLREAAQILHDRDVRRLPVVD 123 Query: 112 DQGGVLCVVT 121 + V+ ++T Sbjct: 124 GESHVIGILT 133 >UH38_20850 histidine kinase Length = 631 Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 82/379 (21%), Positives = 160/379 (42%), Gaps = 62/379 (16%) Query: 1313 EQKRAQQMLELQAVVTRNMAEGLCLVRASDGVIVYTNPKFEQIFGYEVSELLGQHISIIN 1372 E+KR++Q + QA + ++A LV+ + I+Y N E+++GY +E + ++ + Sbjct: 126 ERKRSEQKIREQAALL-DIATDAILVQDLNDQILYWNKGAERLYGYCATEAVNSQVTKLW 184 Query: 1373 YEDEHTKPIEIHEAIAAAATLHGETTYEVQNIKKDGTPFWCRATAS-VFEHPEYGTVFVA 1431 ++ + + + A+ G E+Q + K+G + + V + T + Sbjct: 185 DKESLAQFAAAKDILRASDAWQG----ELQQVTKEGKIVVVESRWTLVRDRANLPTSILV 240 Query: 1432 VQQDITEQKQAEEKIKASLKEKEV--LLQEIHHRVKNNLGIVSSLLQMQCRRTQDPQANA 1489 V DIT++KQ E + + + + + L I H + N L + +Q+ + +PQ Sbjct: 241 VNTDITQKKQLESQFLRAQRMESIGTLASGIAHDLNNILAPILMSVQLLQIKFPEPQNQR 300 Query: 1490 ILRDSQNRIASIALAHEKLYRSNDLANIDFAQYIPDLTTHLFDSYNVKSSCIQLSIQVEE 1549 +L + + A +++ + FA+ + T + VK +++ V+E Sbjct: 301 LLATIETNVKRGAALIKQV--------LSFARGLEGKRT----TVQVKHLILEIEHIVKE 348 Query: 1550 T---SLDLETAIPCGL------------IINELVSNALKYAFPNN------------REG 1582 T S++L T I L I+ LV NAL A PN E Sbjct: 349 TFPKSIELYTNIASDLWTVSGDPTQLHQILMNLVVNALD-AMPNGGILKIDAENIIIDEN 407 Query: 1583 EIQVRLFQQSDRTLTLIVRDNGIGLPVE---------FDGK---KTKTLGITLVQGLVQQ 1630 ++ + Q + + + D G G+ + F K K LG++ V G+V+ Sbjct: 408 YLRTHIDAQVGAYIAIAISDTGTGIEPQVMERIFEPFFTTKNIGKGTGLGLSTVMGIVKS 467 Query: 1631 LRGKLEIQSQ--SGTEFKI 1647 G + + S+ GT+FK+ Sbjct: 468 HGGFVHVYSEVGEGTQFKV 486 >UH38_06285 hypothetical protein Length = 141 Score = 38.5 bits (88), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 15/39 (38%), Positives = 21/39 (53%) Query: 1069 EEQLRLTLEYTHIGNWDWNLHTNEVIWNYNHYRLLGLDP 1107 EEQ R+ E +G W WN+ NE++W L G+ P Sbjct: 85 EEQTRMATEAADLGMWFWNIPQNELVWTDRCKALFGIAP 123 >UH38_05270 histidine kinase Length = 442 Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust. Identities = 83/352 (23%), Positives = 149/352 (42%), Gaps = 61/352 (17%) Query: 1337 LVRASDGVIVYTNPKFEQIFGYEVSELLGQHIS-IINYEDEHTKPIEIHEAIAAAATLHG 1395 LV G++ N + S L+G+ ++ I +D H +++ L Sbjct: 87 LVTDPSGIVREHNQAAASLLNMPKSALVGKPLANYIALKDRHALRYQLNRV----QELER 142 Query: 1396 ETTYEVQNIKKDGTPFWCRAT-ASVFEHPEYGTVFVAVQQDITEQKQAEEKIKA------ 1448 +E+ + PF T A+V + T + +DIT +KQAEEK++ Sbjct: 143 LPEWEINICPRQSQPFAAAITIATVRDRQGKVTDLRCMIRDITARKQAEEKLQKIQVQNL 202 Query: 1449 ----SLKEKEVLLQEIHHRVKNNLGIVSSLLQMQCRRT----QDPQANAILRDSQNRIAS 1500 S K K L + H +++ + + Q+ R+ QAN + R N Sbjct: 203 QLQESAKLKSHFLAIMSHELRSPMNAIIGFSQILLRQAPPNLASNQANMVERIFSNGKHL 262 Query: 1501 IALAHEKLYRSNDLANIDFAQYIPDLTTHLFDSYNVKSSCIQLSIQVEETS---LDLETA 1557 + L E L D A I+ + +L F+ + ++ S + E L++E Sbjct: 263 LKLIDEIL----DFARIEAGRM--ELKLAEFNLVQLVKETVEESRSLAEQKNLVLEVELN 316 Query: 1558 IPCGLIINE----------LVSNALKYAFPNNREGEIQVRLFQQ-SDRTLTLIVRDNGIG 1606 + I+N+ L+SNA+K+ EG++ V + + SDR L + V+D GIG Sbjct: 317 LTNPNIVNDSDRLRQVLINLISNAIKFTG----EGKVAVTVEELWSDR-LAIAVKDTGIG 371 Query: 1607 LP---VE--FD----GKKTKT-------LGITLVQGLVQQLRGKLEIQSQSG 1642 + +E FD +T T LG+ + LV+ ++GK++++S+ G Sbjct: 372 IAEADIEHIFDEFRQANQTITRQHGGTGLGLAICDRLVRLMQGKIDVESKLG 423 >UH38_08140 cyanobacterial phytochrome A Length = 749 Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 26/133 (19%) Query: 1543 LSIQVEETS--LDLETAIP---CGLI-----INELVSNALKYAFPNNREGEIQVRLFQQS 1592 LS ++EETS +D+ A+P C + + L+SNA+KY+ + EI L ++ Sbjct: 615 LSARIEETSAKIDIPRALPIINCDRVQVTEVFSNLISNAIKYSDRPQKWVEIGY-LDAET 673 Query: 1593 DRTLTLIVRDNGIGLPVEFDGKKTKTL---------------GITLVQGLVQQLRGKLEI 1637 + + VRDNGIG+ + + G+T+V+ +V++ GK+ + Sbjct: 674 ESPIVFYVRDNGIGIKERYLDSIFRIFKRLHGQNQYGGGTGAGLTIVKKIVERHGGKIWV 733 Query: 1638 QSQSGTEFKISFT 1650 +S G FT Sbjct: 734 ESTYGRGSTFYFT 746 >UH38_17725 hypothetical protein Length = 695 Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust. Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 9/142 (6%) Query: 1186 RKQTEQALREKEHFLSSIYDGVANSIFVVDVVNGDFRFMGLNPAHEQLTGFISHELQGKT 1245 R + E+ L+E+E +L +I + +++ D LNP E LTG+ + GK Sbjct: 119 RNKLERKLKEREQWLETILTSLGDAVIATD---NKSCITLLNPVAEALTGWKQADAFGKN 175 Query: 1246 PEQVLPPILAAT---VRQHYQDCIEAGETITYEEYLYLKNQDTWWIT---NLTPLRDENL 1299 ++ + A T V ++ G + E L ++D I + P+ +E Sbjct: 176 AAEIFNIVHAQTRNEVDSPIAKALQTGIVVGLPEDTILLSKDKLEIPIDDSAAPIFNEEG 235 Query: 1300 NIYRIIGSGINITEQKRAQQML 1321 +I + +I+++KRA+++L Sbjct: 236 DIRGAVIVFRDISDRKRAEEVL 257 Score = 30.8 bits (68), Expect = 0.97, Method: Compositional matrix adjust. Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 2/87 (2%) Query: 988 ENLQLYHPQDQQKLHQAVERAVSTGESYKLVLRA--FKADGSMIYVEGIGHPQFNPQKQV 1045 E + H Q + ++ + +A+ TG L D I ++ P FN + + Sbjct: 178 EIFNIVHAQTRNEVDSPIAKALQTGIVVGLPEDTILLSKDKLEIPIDDSAAPIFNEEGDI 237 Query: 1046 IRLYGTAQDITSRKQAQEALTKSEEQL 1072 +DI+ RK+A+E L +SE++L Sbjct: 238 RGAVIVFRDISDRKRAEEVLRESEQRL 264 >UH38_15015 hypothetical protein Length = 935 Score = 35.4 bits (80), Expect = 0.035, Method: Compositional matrix adjust. Identities = 51/158 (32%), Positives = 74/158 (46%), Gaps = 14/158 (8%) Query: 410 ELDLIRSETQYRLLFENNPNPMWIFDPETLSFLAVNQAAIYKYGYSQAEFLSMTVLDIC- 468 E L+ +E +Y LFEN + + PE FL VN+A GYS AE S+T+ DI Sbjct: 570 ESALLETEARYWDLFENANDLIQSVTPEGY-FLYVNRAWRETLGYSAAEVNSLTIFDIID 628 Query: 469 --PREKIPALLRSMSDFGVFSSAIYVGEAKHCTRDGTLIDVEVNSHPIAWLGKPAKF-AL 525 RE + + + EA+ T+ G I VE + + G+P ++ Sbjct: 629 CDSREHCLEIFEQVMS----GEEVDKVEAEFVTKYGEKIIVEGSVNCKFLDGEPVSTRSI 684 Query: 526 AKDITAQKAALRELQEI---EIELRESK-RFIEQVISH 559 ++IT +K A E+Q E EL E K RFI + SH Sbjct: 685 FRNITERKRAEVEIQYALAKERELGELKSRFI-SIASH 721 >UH38_21470 diguanylate cyclase Length = 117 Score = 32.7 bits (73), Expect = 0.048, Method: Compositional matrix adjust. Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 3/44 (6%) Query: 1337 LVRASDGVIVYTNPKFEQIFGYEVSELLGQHISII---NYEDEH 1377 L+ G+IVY N F FG++ E+LG+ + + +Y D H Sbjct: 16 LIADCQGLIVYVNEPFNLAFGWQAEEILGRSLEAVIPHSYHDSH 59 >UH38_10930 hypothetical protein Length = 698 Score = 34.7 bits (78), Expect = 0.054, Method: Compositional matrix adjust. Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 31/127 (24%) Query: 1543 LSIQVEETSLDLETAIPCGLIINELVSNALKYAFPNNREGEIQVRLFQQSDRTLTLIVRD 1602 LS+Q + S D I++EL++NA KYA P+ + ++ QQ + + L + + Sbjct: 574 LSLQTDSDSFDR--------ILHELLTNAGKYANPDT---DAILKASQQGSQII-LSITN 621 Query: 1603 NGIGLPVE-----FD-----------GKKTKTLGITLVQGLVQQLRGKLEIQS---QSGT 1643 G +P E FD K LG+ LV+ LVQ L G +E+ S ++ + Sbjct: 622 IGPAIPPEDASYIFDKFRRGQGVTDQAIKGTGLGLALVKSLVQHLNGTIEVVSTPIENSS 681 Query: 1644 EFKISFT 1650 ++ FT Sbjct: 682 SAQVCFT 688 >UH38_21350 histidine kinase Length = 387 Score = 34.3 bits (77), Expect = 0.065, Method: Compositional matrix adjust. Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 18/94 (19%) Query: 1563 IINELVSNALKYAFPNNREGEIQVRLFQQSDRTLTLIVRDNGIGLPVEFD---------G 1613 I+ L+SNA+KY+ P G I+ + Q+ +T ++D+GIG+P E+ Sbjct: 282 ILTNLLSNAIKYS-PAG--GLIKFEVTAQAT-AVTFKIQDSGIGIPQEYQKQLFQPFTRA 337 Query: 1614 KKTKT-----LGITLVQGLVQQLRGKLEIQSQSG 1642 + T T LG+ +V+ ++ +G++ + S+ G Sbjct: 338 ENTDTIPGTGLGLAIVKRCIEAYKGQISVNSEIG 371 >UH38_22880 histidine kinase Length = 636 Score = 34.3 bits (77), Expect = 0.069, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 67/133 (50%), Gaps = 10/133 (7%) Query: 1185 DRKQTEQALREKEHFLSSIYDGVANSIFVVDVVNGDFRFMGLNPAHEQLTGFISHELQGK 1244 +RK+ EQ +RE+ +++ D ++I V D+ + R + N E L G+ + + GK Sbjct: 126 ERKRAEQKIREQ----AALLDIATDAILVRDLTS---RILFWNKGAEHLYGWSAETVLGK 178 Query: 1245 TPEQVLPPILAATVRQHYQDCIEAGETITYEEYLYLKNQDTWWI-TNLTPLRDENLNIYR 1303 T + +L P + ++ + E GE + E + KN + + T +RD+N Sbjct: 179 T-DDLLYPQSSPQSQEAQKILFEQGEW-SGELHQVTKNGKEVIVESRWTLMRDDNRQPKS 236 Query: 1304 IIGSGINITEQKR 1316 I+ G N+TE+K+ Sbjct: 237 ILIVGTNVTERKK 249 >UH38_09610 hypothetical protein Length = 605 Score = 32.0 bits (71), Expect = 0.41, Method: Compositional matrix adjust. Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%) Query: 67 TFADLTVGELMSQPVVTVHEAELEDLPNILQRFHQHQIRHLPVL 110 +FA ++V E +SQ +++ EAE E L I+ F +H I HL L Sbjct: 529 SFAKISV-EKLSQDLISALEAEEERLRRIIDSFREHLIAHLSEL 571 >UH38_11850 chloride channel protein Length = 895 Score = 31.6 bits (70), Expect = 0.51, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 4/90 (4%) Query: 43 VIAKDELRGILTQTDVLRGIANRMTFADLTVGELMSQPVVTVHEAELEDLPNILQRFHQH 102 V+ +L GI+TQTD+ + + +R D + E+M+ VTV L N+L + Sbjct: 481 VVDDGKLVGIVTQTDIAK-MRDRTLPGDTLLSEIMTPEPVTVSPQ--ASLANVLYLLDRA 537 Query: 103 QIRHLPVLDDQGGVLCVVTLEEVKTAQLEQ 132 + LPV+ +Q ++ ++T ++ A+ ++ Sbjct: 538 SLSRLPVV-EQKKLIGIITRADIIRAEADK 566 >UH38_17260 histidine kinase Length = 668 Score = 31.6 bits (70), Expect = 0.54, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 22/109 (20%) Query: 1563 IINELVSNALKYAFPNNREGEIQVRLFQQSDRTLTLIVRDNGIG-----LPVEFD----- 1612 +I++L+ NA K+ P +G+I + DR + + V DNG G L V FD Sbjct: 559 VISKLLDNAGKFTPP---QGQIAIEAHSNGDRMVEVTVADNGRGIEPNRLEVVFDRFYQE 615 Query: 1613 -GKKTKT-----LGITLVQGLVQQLRGKLEIQSQS---GTEFKISFTTG 1652 G +T LG+ + + +V G++ +S G++F + T Sbjct: 616 EGSLRRTVGGTGLGLAICRQIVNGWGGQIWAESDGKDRGSKFHFTIPTA 664 >UH38_12355 histidine kinase Length = 389 Score = 31.2 bits (69), Expect = 0.56, Method: Compositional matrix adjust. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 15/69 (21%) Query: 1554 LETAIPCGL------------IINELVSNALKYAFPNNREGEIQVRLFQQSDRTLTLIVR 1601 LET +PC L ++ L+ NA+KY G I++ ++ + + + + Sbjct: 264 LETDLPCDLPCVYADIERLRQVLINLLENAIKY---TPASGTIRISALHRTSQKVQVSIC 320 Query: 1602 DNGIGLPVE 1610 D G G+PVE Sbjct: 321 DTGPGIPVE 329 >UH38_20200 histidine kinase Length = 444 Score = 30.8 bits (68), Expect = 0.81, Method: Compositional matrix adjust. Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 22/105 (20%) Query: 1563 IINELVSNALKYAFPNNREGEIQVRLFQQSDRTLTLIVRDNGIGLPVE-----------F 1611 ++ LV NA+ Y + I SD + ++D G+G+ + Sbjct: 330 LVYNLVINAIHYTLAGGKVTAI----LDCSDHHALIKIQDTGVGIAAKEQKRIFTRFYRV 385 Query: 1612 DGKKTKT-----LGITLVQGLVQQLRGKLEIQSQ--SGTEFKISF 1649 D +++T LG+ + Q +VQ G L++ S+ G+ F I Sbjct: 386 DSDRSRTSGGAGLGLAIAQAIVQAHHGSLQVHSELGKGSTFTIRL 430 >UH38_11050 histidine kinase Length = 884 Score = 30.8 bits (68), Expect = 0.97, Method: Compositional matrix adjust. Identities = 55/255 (21%), Positives = 107/255 (41%), Gaps = 45/255 (17%) Query: 1432 VQQDITEQKQAEEKIKASLKEKEVLLQEIHHRVKNNLGIVSSLLQMQCRRTQDP---QAN 1488 V+Q E Q+++ +A+ + K L + H ++ L + Q+ R + P Q N Sbjct: 405 VEQRTIELNQSKQLAEAANRAKSEFLANMSHELRTPLNAILGFAQIMNRDSSFPPQQQEN 464 Query: 1489 -AILRDSQNRIASIALAHEKLYRSNDLANIDFAQYIPDLTTHLFDSYNVKSSCIQL-SIQ 1546 I+ S + ++L ++ L D++ I+ + + LT + FD Y++ ++ ++ ++ Sbjct: 465 LGIINRSGEHL--LSLINDVL----DMSKIEAGRIV--LTENAFDLYDLLNTIYEMFKLK 516 Query: 1547 VEETSLDLETAIPCGL-------------IINELVSNALKYAFPNNREGEIQVRLFQQSD 1593 L LE L I+ L+SNA+K F + + + V+ + SD Sbjct: 517 AAAKGLQLEIECDANLPQYVYTDESKLRQILLNLLSNAIK--FTDAGKVNLHVQGKKGSD 574 Query: 1594 R--TLTLIVRDNGIGLPVE---------------FDGKKTKTLGITLVQGLVQQLRGKLE 1636 R TL+ V D G G+ + + + LG+ + + VQ + G + Sbjct: 575 RHYTLSFAVEDTGHGIAQQELTSLFEPFVQTETGRNSGQGTGLGLPISRKFVQLMGGDIT 634 Query: 1637 IQSQSGTEFKISFTT 1651 + S G F T Sbjct: 635 VSSTLGKGTIFRFDT 649 Database: GCA_000952155.1P Posted date: Aug 27, 2016 10:32 PM Number of letters in database: 1,296,044 Number of sequences in database: 4367 Lambda K H 0.319 0.135 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4367 Number of Hits to DB: 4,210,203 Number of extensions: 181488 Number of successful extensions: 717 Number of sequences better than 1.0: 31 Number of HSP's gapped: 664 Number of HSP's successfully gapped: 85 Length of query: 1654 Length of database: 1,296,044 Length adjustment: 96 Effective length of query: 1558 Effective length of database: 876,812 Effective search space: 1366073096 Effective search space used: 1366073096 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 62 (28.5 bits)